Bhi12G001315 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G001315
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr12: 48832085 .. 48832750 (-)
RNA-Seq Expression	Bhi12G001315
Synteny	Bhi12G001315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTGGAGAATTTTTTACGGTCCAAAGAGTATTGGACCATTGTTGAAGCAGGAGTGAATGAACTTGCTGCTGGAGTTGTCTTGTCAGAAGCTGACCAAAAGAAGCTAGAGGAACAAAAATTGAAGGATCTCAAGGTAAAGAATTATTTATTCCAAGCCATTGATTGTACCATCTTGGAGACTATTTTGCAAAAGGATACATACAAGCAAATTTGGGACTCCATGAAGAAAAAGTATCAAGGCACAACGAGGGTGAAAAGATAGCAGCTCCAAGCTCTTCGCAAAGAGTTCAAGATTCTTAAAATGAAGCAAGGTGAGTCCGTGGATGGGTATTTCTCACGGACCTTGGCTATAACAAACAAGATGCGTATCCATGGAGAGAAGATTGAAAATGTAGTTGTGGTTGAGAAGATTCTTCGGTCAATGGATTCTAAATTTTCATATATGGTTTGTTCAATTGAGAAATCAAAAGATATTGATACATTATCAATTGATGAATTACAAAGTTCTTTACTTGTGCATGAGCAGAAAATGACGTCAAATACAGGTCCAACCGAAGAACAAGCTCTGAAAACTTCAACTCATGGTGAAACTCTACAGGGAGAGGATCAAATAGAGGATGTGGTCGAGGTCGTGGAAGGTGGCAAGGAAGAGGACGAGGTG

mRNA sequence

ATGTTACTGGAGAATTTTTTACGGTCCAAAGAGTATTGGACCATTGTTGAAGCAGGAGTGAATGAACTTGCTGCTGGAGTTGTCTTGTCAGAAGCTGACCAAAAGAAGCTAGAGGAACAAAAATTGAAGGATCTCAAGGTAAAGAATTATTTATTCCAAGCCATTGATTGTACCATCTTGGAGACTATTTTGCAAAAGGATACATACAAGCAAATTTGGGACTCCATGAAGAAAAAGTATCAAGGCACAACGAGGATTCTTAAAATGAAGCAAGGTGAGTCCGTGGATGGGTATTTCTCACGGACCTTGGCTATAACAAACAAGATGCGTATCCATGGAGAGAAGATTGAAAATGTAGTTGTGGTTGAGAAGATTCTTCGGTCAATGGATTCTAAATTTTCATATATGGTTTGTTCAATTGAGAAATCAAAAGATATTGATACATTATCAATTGATGAATTACAAAGTTCTTTACTTGTGCATGAGCAGAAAATGACGTCAAATACAGGTCCAACCGAAGAACAAGCTCTGAAAACTTCAACTCATGGTGAAACTCTACAGGGAGAGGATCAAATAGAGGATGTGGTCGAGGTCGTGGAAGGTGGCAAGGAAGAGGACGAGGTG

Coding sequence (CDS)

ATGTTACTGGAGAATTTTTTACGGTCCAAAGAGTATTGGACCATTGTTGAAGCAGGAGTGAATGAACTTGCTGCTGGAGTTGTCTTGTCAGAAGCTGACCAAAAGAAGCTAGAGGAACAAAAATTGAAGGATCTCAAGGTAAAGAATTATTTATTCCAAGCCATTGATTGTACCATCTTGGAGACTATTTTGCAAAAGGATACATACAAGCAAATTTGGGACTCCATGAAGAAAAAGTATCAAGGCACAACGAGGATTCTTAAAATGAAGCAAGGTGAGTCCGTGGATGGGTATTTCTCACGGACCTTGGCTATAACAAACAAGATGCGTATCCATGGAGAGAAGATTGAAAATGTAGTTGTGGTTGAGAAGATTCTTCGGTCAATGGATTCTAAATTTTCATATATGGTTTGTTCAATTGAGAAATCAAAAGATATTGATACATTATCAATTGATGAATTACAAAGTTCTTTACTTGTGCATGAGCAGAAAATGACGTCAAATACAGGTCCAACCGAAGAACAAGCTCTGAAAACTTCAACTCATGGTGAAACTCTACAGGGAGAGGATCAAATAGAGGATGTGGTCGAGGTCGTGGAAGGTGGCAAGGAAGAGGACGAGGTG

Protein sequence

MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTILETILQKDTYKQIWDSMKKKYQGTTRILKMKQGESVDGYFSRTLAITNKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMTSNTGPTEEQALKTSTHGETLQGEDQIEDVVEVVEGGKEEDEV

Homology

[Close]

BLAST of Bhi12G001315 vs. NCBI nr
Match: TXG72705.1 (hypothetical protein EZV62_001284 [Acer yangbiense])

HSP 1 Score: 247.7 bits (631), Expect = 9.0e-62
Identity = 136/202 (67.33%), Postives = 156/202 (77.23%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYW IVE G+ E A   VL+EA QKKL+E KLKDLK KNYLFQAID  IL
Sbjct: 23  MLMENFLRSKEYWIIVETGIKEPAQDEVLTEAQQKKLDELKLKDLKAKNYLFQAIDRAIL 82

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETILQKDT KQIWDSMK+KY G+TR              IL MK+GESVD YFSRTL I 
Sbjct: 83  ETILQKDTSKQIWDSMKRKYAGSTRVKRQQLQALRKDFEILHMKEGESVDEYFSRTLTIV 142

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRIHG ++++V V+EKILRSM  KF+Y+VCSIE+SKDIDTLSIDELQSSLL+HEQ+M 
Sbjct: 143 NKMRIHGGQMDDVAVIEKILRSMSPKFAYVVCSIEESKDIDTLSIDELQSSLLIHEQRMA 202

Query: 181 SNTGPTEEQALKTSTHGETLQG 189
             T   +EQALK STH ++  G
Sbjct: 203 PPT--IDEQALKVSTHFDSPTG 222

[Close]

BLAST of Bhi12G001315 vs. NCBI nr
Match: XP_028061584.1 (uncharacterized protein LOC114265042 [Camellia sinensis])

HSP 1 Score: 244.2 bits (622), Expect = 9.9e-61
Identity = 130/199 (65.33%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYWT+V  G  E   G VLSEA QK+L+EQ+LKDLKVKNYLFQAID TIL
Sbjct: 26  MLMENFLRSKEYWTLVATGFVEPETGAVLSEAQQKRLDEQRLKDLKVKNYLFQAIDRTIL 85

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTRI--------------LKMKQGESVDGYFSRTLAIT 120
           ETIL+K+T KQIWDSMKKKYQGT+++              L+MK GESV  YFSRT+ I 
Sbjct: 86  ETILRKETSKQIWDSMKKKYQGTSKVNRSQLQALYREFETLQMKSGESVSDYFSRTMTIA 145

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRIHG++I++V++VEK  RSM  KF Y+VCSIE+SKDID LS+DELQS L VHEQ + 
Sbjct: 146 NKMRIHGDQIQDVIIVEKFFRSMTMKFDYIVCSIEESKDIDELSVDELQSLLQVHEQNLN 205

Query: 181 SNTGPTEEQALKTSTHGET 186
            +T  TEEQALK ST+GE+
Sbjct: 206 RST--TEEQALKVSTNGES 222

[Close]

BLAST of Bhi12G001315 vs. NCBI nr
Match: KYP57183.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 238.8 bits (608), Expect = 4.2e-59
Identity = 129/199 (64.82%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYW++VE G+ + A G +++EA +K LE+QKLKDLK KNYLFQAID TIL
Sbjct: 1   MLMENFLRSKEYWSLVEIGITKPADGTIMTEAQRKTLEDQKLKDLKTKNYLFQAIDRTIL 60

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETIL+KDT K IWDSMK KYQGT R              IL MK+GESV+ YF+RTL++ 
Sbjct: 61  ETILKKDTAKDIWDSMKTKYQGTARVKRAQLQALRKEFEILHMKEGESVNDYFARTLSVA 120

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRIHGEK+E+V VVEKILRSM  KF Y+VCSIE+S DID+LSID LQSSLLVHEQ+M 
Sbjct: 121 NKMRIHGEKLEDVAVVEKILRSMTRKFDYVVCSIEESNDIDSLSIDVLQSSLLVHEQRMI 180

Query: 181 SNTGPTEEQALKTSTHGET 186
                 +EQALK +TH  T
Sbjct: 181 CYV--VDEQALKITTHEGT 197

[Close]

BLAST of Bhi12G001315 vs. NCBI nr
Match: MCI13496.1 (resistance-like protein [Trifolium medium])

HSP 1 Score: 237.7 bits (605), Expect = 9.3e-59
Identity = 127/200 (63.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFL+SKEYWT+VE G+ E A+   L+EA +K L++Q+LKDLK KNYLFQA D  +L
Sbjct: 18  MLMENFLKSKEYWTLVETGITEPASETALTEAQKKTLDDQRLKDLKAKNYLFQAXDRAVL 77

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETIL+KDT K IWDSMKKKYQGT R              IL MK+GESV+ YFSRTL+I 
Sbjct: 78  ETILKKDTAKDIWDSMKKKYQGTARVKRAQLQALRKEFEILHMKEGESVNDYFSRTLSIA 137

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRI+G+K+E+V V+EKILRSM  KF Y+VCSIE+S DID+LSIDELQSSLLVHEQ+M 
Sbjct: 138 NKMRINGDKLEDVAVIEKILRSMTRKFDYVVCSIEESNDIDSLSIDELQSSLLVHEQRMV 197

Query: 181 SNTGPTEEQALKTSTHGETL 187
           S     EEQALK + H  T+
Sbjct: 198 SYV--VEEQALKVTAHEGTI 215

[Close]

BLAST of Bhi12G001315 vs. NCBI nr
Match: XP_024178936.1 (uncharacterized protein LOC112184946 [Rosa chinensis])

HSP 1 Score: 236.1 bits (601), Expect = 2.7e-58
Identity = 124/199 (62.31%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYW++VE G  E  +G  ++EA Q+KL+E  LKDLKVKNYLFQAID TIL
Sbjct: 24  MLMENFLRSKEYWSLVETGFVEPESGATMTEAQQRKLDELSLKDLKVKNYLFQAIDRTIL 83

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTRI--------------LKMKQGESVDGYFSRTLAIT 120
           ETIL+KDT K+IWDSMKKKY+G+ ++              L+MKQGESV+ YFSRT+AI 
Sbjct: 84  ETILKKDTSKEIWDSMKKKYKGSVKVKRSQLQALRRDFETLQMKQGESVNEYFSRTMAIA 143

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMR+ G+ + +V +VEKILRSM  KF Y+VCSIE+S D+D LSIDELQSSLLVHEQK+ 
Sbjct: 144 NKMRLQGDSMTDVTIVEKILRSMTPKFDYIVCSIEESNDVDELSIDELQSSLLVHEQKLN 203

Query: 181 SNTGPTEEQALKTSTHGET 186
            ++  TEEQAL  ST  E+
Sbjct: 204 RSSTTTEEQALNVSTFAES 222

[Close]

BLAST of Bhi12G001315 vs. ExPASy TrEMBL
Match: A0A5C7IU47 (Integrase catalytic domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001284 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.4e-62
Identity = 136/202 (67.33%), Postives = 156/202 (77.23%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYW IVE G+ E A   VL+EA QKKL+E KLKDLK KNYLFQAID  IL
Sbjct: 23  MLMENFLRSKEYWIIVETGIKEPAQDEVLTEAQQKKLDELKLKDLKAKNYLFQAIDRAIL 82

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETILQKDT KQIWDSMK+KY G+TR              IL MK+GESVD YFSRTL I 
Sbjct: 83  ETILQKDTSKQIWDSMKRKYAGSTRVKRQQLQALRKDFEILHMKEGESVDEYFSRTLTIV 142

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRIHG ++++V V+EKILRSM  KF+Y+VCSIE+SKDIDTLSIDELQSSLL+HEQ+M 
Sbjct: 143 NKMRIHGGQMDDVAVIEKILRSMSPKFAYVVCSIEESKDIDTLSIDELQSSLLIHEQRMA 202

Query: 181 SNTGPTEEQALKTSTHGETLQG 189
             T   +EQALK STH ++  G
Sbjct: 203 PPT--IDEQALKVSTHFDSPTG 222

[Close]

BLAST of Bhi12G001315 vs. ExPASy TrEMBL
Match: A0A151SQX0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_003441 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.0e-59
Identity = 129/199 (64.82%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYW++VE G+ + A G +++EA +K LE+QKLKDLK KNYLFQAID TIL
Sbjct: 1   MLMENFLRSKEYWSLVEIGITKPADGTIMTEAQRKTLEDQKLKDLKTKNYLFQAIDRTIL 60

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETIL+KDT K IWDSMK KYQGT R              IL MK+GESV+ YF+RTL++ 
Sbjct: 61  ETILKKDTAKDIWDSMKTKYQGTARVKRAQLQALRKEFEILHMKEGESVNDYFARTLSVA 120

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRIHGEK+E+V VVEKILRSM  KF Y+VCSIE+S DID+LSID LQSSLLVHEQ+M 
Sbjct: 121 NKMRIHGEKLEDVAVVEKILRSMTRKFDYVVCSIEESNDIDSLSIDVLQSSLLVHEQRMI 180

Query: 181 SNTGPTEEQALKTSTHGET 186
                 +EQALK +TH  T
Sbjct: 181 CYV--VDEQALKITTHEGT 197

[Close]

BLAST of Bhi12G001315 vs. ExPASy TrEMBL
Match: A0A392PQB8 (Resistance-like protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.5e-59
Identity = 127/200 (63.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFL+SKEYWT+VE G+ E A+   L+EA +K L++Q+LKDLK KNYLFQA D  +L
Sbjct: 18  MLMENFLKSKEYWTLVETGITEPASETALTEAQKKTLDDQRLKDLKAKNYLFQAXDRAVL 77

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETIL+KDT K IWDSMKKKYQGT R              IL MK+GESV+ YFSRTL+I 
Sbjct: 78  ETILKKDTAKDIWDSMKKKYQGTARVKRAQLQALRKEFEILHMKEGESVNDYFSRTLSIA 137

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKMRI+G+K+E+V V+EKILRSM  KF Y+VCSIE+S DID+LSIDELQSSLLVHEQ+M 
Sbjct: 138 NKMRINGDKLEDVAVIEKILRSMTRKFDYVVCSIEESNDIDSLSIDELQSSLLVHEQRMV 197

Query: 181 SNTGPTEEQALKTSTHGETL 187
           S     EEQALK + H  T+
Sbjct: 198 SYV--VEEQALKVTAHEGTI 215

[Close]

BLAST of Bhi12G001315 vs. ExPASy TrEMBL
Match: A0A2N9FH80 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14337 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.7e-59
Identity = 124/200 (62.00%), Postives = 156/200 (78.00%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENFLRSKEYW++VE G+   A GV L+EA QK + +QKLKDLKVKNYLFQAID TI+
Sbjct: 24  MLMENFLRSKEYWSLVETGIPAAAEGVELTEAQQKSIADQKLKDLKVKNYLFQAIDRTIM 83

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETIL +DT K IWDSMK+KYQG+TR              +L+MK+GESVD YF+RTL I 
Sbjct: 84  ETILNRDTAKHIWDSMKQKYQGSTRVKRAQLQALRKEFEVLQMKEGESVDAYFARTLIIA 143

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKM+IHGE ++ VV++EKILRSM S+F Y+VCS+E+S ++DTL+IDELQSSLLVHEQ+M 
Sbjct: 144 NKMKIHGENMQQVVIIEKILRSMTSRFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMN 203

Query: 181 SNTGPTEEQALKTSTHGETL 187
            + G  +EQALK  TH + +
Sbjct: 204 GHGG--DEQALKV-THDDRI 220

[Close]

BLAST of Bhi12G001315 vs. ExPASy TrEMBL
Match: A0A2P6PHB2 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0237911 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.7e-58
Identity = 128/196 (65.31%), Postives = 151/196 (77.04%), Query Frame = 0


Query: 1   MLLENFLRSKEYWTIVEAGVNELAAGVVLSEADQKKLEEQKLKDLKVKNYLFQAIDCTIL 60
           ML+ENF+RSKEYW +VE  V E AAGV  +E  QKKLEE KLKDLK KNYLFQAID  +L
Sbjct: 24  MLMENFMRSKEYWCVVENEVREPAAGVAQTEVQQKKLEELKLKDLKAKNYLFQAIDRDLL 83

Query: 61  ETILQKDTYKQIWDSMKKKYQGTTR--------------ILKMKQGESVDGYFSRTLAIT 120
           ETILQKDT KQIWD+MK+KYQ +TR              +L MK+GESVD YFSRTL+I 
Sbjct: 84  ETILQKDTSKQIWDAMKQKYQRSTRVKRQQLQALRKEFEVLHMKEGESVDEYFSRTLSIA 143

Query: 121 NKMRIHGEKIENVVVVEKILRSMDSKFSYMVCSIEKSKDIDTLSIDELQSSLLVHEQKMT 180
           NKM +HG K+ENV VVEK+LRSM SKF Y+VCSIE+SK+++ +SI+EL SSLLVHEQ+M 
Sbjct: 144 NKMSVHGGKLENVAVVEKVLRSMTSKFDYVVCSIEESKNVEEMSIEELHSSLLVHEQRMK 203

Query: 181 SNTGPTEEQALKTSTH 183
           SN    EEQALK ST+
Sbjct: 204 SNY--LEEQALKVSTN 217

The following BLAST results are available for this feature:

BLAST of Bhi12G001315 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G001315 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G001315 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG72705.1	9.0e-62	67.33	hypothetical protein EZV62_001284 [Acer yangbiense]	[more]
XP_028061584.1	9.9e-61	65.33	uncharacterized protein LOC114265042 [Camellia sinensis]	[more]
KYP57183.1	4.2e-59	64.82	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
MCI13496.1	9.3e-59	63.50	resistance-like protein [Trifolium medium]	[more]
XP_024178936.1	2.7e-58	62.31	uncharacterized protein LOC112184946 [Rosa chinensis]	[more]

BLAST of Bhi12G001315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7IU47	4.4e-62	67.33	Integrase catalytic domain-containing protein OS=Acer yangbiense OX=1000413 GN=E...	[more]
A0A151SQX0	2.0e-59	64.82	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]
A0A392PQB8	4.5e-59	63.50	Resistance-like protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1	[more]
A0A2N9FH80	7.7e-59	62.00	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]
A0A2P6PHB2	1.7e-58	65.31	Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 43..166 e-value: 3.1E-15 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..186
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 1..193
None	No IPR available	PANTHER	PTHR34222:SF47	SUBFAMILY NOT NAMED	coord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001315	Bhi12M001315	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016779	nucleotidyltransferase activity