Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATACAATGTCTAATTTGAGACGCAGAAAGGGTGTTCGTCTTCAGAGATTTGAAGAAAGATGGGTTGGTAACGATAATTGCAAGAAAATTATTGAATCGGTTTGGCTCAATAGTGATCTGGATGTTGAAGTTGGCTTACAACAGAAATTACATATATGCATTAAAAAATTAAGGAGCTGGGATAAAGAGAGACTTAATGGCTCGCTTCGAGGAGCTATCACTAGAAAACAAAATGAGTTAAATTTTCTCAGAAATTCTCTTGTTAGGAGCACAGATTTGAATGAGAGTGCTAATTGGATTCGGGCGGAAAAGAAGCTCGAAATGCTTTTGGACGATGATGACAGATACTGGAAAATTTGTTCTTGGGAAGATTGGATTCATTGGTGCGATGGGAATACTAAATGGTTTCATCGTAAGGCCTTCGCTAGAAGGAAGACAAAGACTATTGTAGGCCTTTATGGTGAAAAATGTTCCTGGATTGAGGAAGACGCCGATTTGATGCTTTCCCAAAGATAA
mRNA sequence
ATGGCAAATACAATGTCTAATTTGAGACGCAGAAAGGGTGTTCGTCTTCAGAGATTTGAAGAAAGATGGGTTGGTAACGATAATTGCAAGAAAATTATTGAATCGGTTTGGCTCAATAGTGATCTGGATGTTGAAAGACTTAATGGCTCGCTTCGAGGAGCTATCACTAGAAAACAAAATGAGTTAAATTTTCTCAGAAATTCTCTTGTTAGGAGCACAGATTTGAATGAGAGTGCTAATTGGATTCGGGCGGAAAAGAAGCTCGAAATGCTTTTGGACGATGATGACAGATACTGGAAAATTTGTTCTTGGGAAGATTGGATTCATTGGTGCGATGGGAATACTAAATGGTTTCATCGTAAGGCCTTCGCTAGAAGGAAGACAAAGACTATTGTAGGCCTTTATGGTGAAAAATGTTCCTGGATTGAGGAAGACGCCGATTTGATGCTTTCCCAAAGATAA
Coding sequence (CDS)
ATGGCAAATACAATGTCTAATTTGAGACGCAGAAAGGGTGTTCGTCTTCAGAGATTTGAAGAAAGATGGGTTGGTAACGATAATTGCAAGAAAATTATTGAATCGGTTTGGCTCAATAGTGATCTGGATGTTGAAAGACTTAATGGCTCGCTTCGAGGAGCTATCACTAGAAAACAAAATGAGTTAAATTTTCTCAGAAATTCTCTTGTTAGGAGCACAGATTTGAATGAGAGTGCTAATTGGATTCGGGCGGAAAAGAAGCTCGAAATGCTTTTGGACGATGATGACAGATACTGGAAAATTTGTTCTTGGGAAGATTGGATTCATTGGTGCGATGGGAATACTAAATGGTTTCATCGTAAGGCCTTCGCTAGAAGGAAGACAAAGACTATTGTAGGCCTTTATGGTGAAAAATGTTCCTGGATTGAGGAAGACGCCGATTTGATGCTTTCCCAAAGATAA
Protein sequence
MANTMSNLRRRKGVRLQRFEERWVGNDNCKKIIESVWLNSDLDVERLNGSLRGAITRKQNELNFLRNSLVRSTDLNESANWIRAEKKLEMLLDDDDRYWKICSWEDWIHWCDGNTKWFHRKAFARRKTKTIVGLYGEKCSWIEEDADLMLSQR
Homology
BLAST of Bhi12G001308 vs. NCBI nr
Match:
PON78325.1 (Endonuclease/exonuclease/phosphatase [Parasponia andersonii])
HSP 1 Score: 75.9 bits (185), Expect = 3.4e-10
Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 0
Query: 19 FEERWVGNDNCKKIIESVW-----------LNSDLD--VERLNGSLRGAITRKQNELNFL 78
FEE WVG + C IIE VW +N L+ ++L + +Q +L+ L
Sbjct: 94 FEELWVGQNECASIIEKVWDRNTEANTITSVNKKLENCADQLRAWSKLKYGTQQKDLDKL 153
Query: 79 RNSL---VRSTDLNESANWIR-AEKKLEMLLDDDDRYWKICSWEDWIHWCDGNTKWFHRK 138
R+ L R+ L ++A ++ E K+ +L D + YWK SW W+ W D NT++FH K
Sbjct: 154 RSELGLIQRNLSLPDAAERLKVTEDKINKILQDQEIYWKQRSWASWLKWRDRNTRFFHCK 213
Query: 139 AFARRKTKTIVGLYGEKCSWIEEDADL 149
A R+ I GL W +E ++
Sbjct: 214 ASQRQSRNKIWGLIDNNGIWRDEKHEI 240
BLAST of Bhi12G001308 vs. NCBI nr
Match:
XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])
HSP 1 Score: 75.9 bits (185), Expect = 3.4e-10
Identity = 46/162 (28.40%), Postives = 84/162 (51.85%), Query Frame = 0
Query: 4 TMSNLRRRKGVRLQRFEERWVGNDNCKKIIESVW-----------LNSDL-----DVERL 63
T +++R R V+ FE +W ++CK IIE+ W ++ +L ++ +
Sbjct: 188 TDNSIRHRPRVKRFHFEAQWTKREDCKAIIEASWGFGVDLSTPEGISENLRICAVELSKW 247
Query: 64 NGSLRGAITRK-QNELNFLRNSLVRSTDLNESANWIRAEKKLEMLLDDDDRYWKICSWED 123
+ ++ G I +K Q++ + L +R D + S R +++ LLDD++ YW +
Sbjct: 248 SSTIYGQIPKKIQDKRSRLNTLAMRELDEDLSLEINRLREEINALLDDEETYWGQRAKAH 307
Query: 124 WIHWCDGNTKWFHRKAFARRKTKTIVGLYGEKCSWIEEDADL 149
W+ D NTK+FH +A RRK TIVG++ E+ W + + +
Sbjct: 308 WLKEGDRNTKFFHAQASERRKQNTIVGIWDEQGRWCDNEESI 349
BLAST of Bhi12G001308 vs. NCBI nr
Match:
XP_030502373.1 (uncharacterized protein LOC115717527 [Cannabis sativa])
HSP 1 Score: 75.5 bits (184), Expect = 4.5e-10
Identity = 55/164 (33.54%), Postives = 75/164 (45.73%), Query Frame = 0
Query: 6 SNLRRRKGVRLQRFEERWVGNDNCKKIIESVWLNSDL--DVERLNGSLRGAITR------ 65
S RR G R +E W ND C KII VW + + ++ LN L R
Sbjct: 142 SLFRRNWGSRF-HYEHAWADNDECLKIINEVWGDKVMGRPLDNLNHLLSKCGRRLYEWNI 201
Query: 66 KQNELNFLRNSLVRSTDLNESANWI-------------RAEKKLEMLLDDDDRYWKICSW 125
KQ + NF RS +L E +W+ + EK L + + + YW+ S
Sbjct: 202 KQKKANF-----ARSKELKEKIDWLSKSPNMMDWIARQKLEKDLNCVEEKREMYWRQRSR 261
Query: 126 EDWIHWCDGNTKWFHRKAFARRKTKTIVGLYGEKCSWIEEDADL 149
W+ D NTK+FH KA ARRK TI+GLY ++ W + DL
Sbjct: 262 ALWLKHGDQNTKFFHFKASARRKKNTILGLYDDRGHWRTSEKDL 299
BLAST of Bhi12G001308 vs. NCBI nr
Match:
XP_030502370.1 (uncharacterized protein LOC115717524 [Cannabis sativa])
HSP 1 Score: 75.5 bits (184), Expect = 4.5e-10
Identity = 55/164 (33.54%), Postives = 75/164 (45.73%), Query Frame = 0
Query: 6 SNLRRRKGVRLQRFEERWVGNDNCKKIIESVWLNSDL--DVERLNGSLRGAITR------ 65
S RR G R +E W ND C KII VW + + ++ LN L R
Sbjct: 142 SLFRRNWGSRF-HYEHAWADNDECLKIINEVWGDKVMGRPLDNLNHLLSKCGRRLYEWNI 201
Query: 66 KQNELNFLRNSLVRSTDLNESANWI-------------RAEKKLEMLLDDDDRYWKICSW 125
KQ + NF RS +L E +W+ + EK L + + + YW+ S
Sbjct: 202 KQKKANF-----ARSKELKEKIDWLSKSPNMMDWIARQKLEKDLNCVEEKREMYWRQRSR 261
Query: 126 EDWIHWCDGNTKWFHRKAFARRKTKTIVGLYGEKCSWIEEDADL 149
W+ D NTK+FH KA ARRK TI+GLY ++ W + DL
Sbjct: 262 ALWLKHGDQNTKFFHFKASARRKKNTILGLYDDRGHWRTSEKDL 299
BLAST of Bhi12G001308 vs. NCBI nr
Match:
XP_040998143.1 (uncharacterized protein LOC121244182 [Juglans microcarpa x Juglans regia])
HSP 1 Score: 72.8 bits (177), Expect = 2.9e-09
Identity = 53/161 (32.92%), Postives = 76/161 (47.20%), Query Frame = 0
Query: 4 TMSNLR-RRKGVRLQRFEERWVGNDNCKKIIESVWLNSD----------------LDVER 63
T SN R RRKG RL RFE WVG C IIE VW + +D+ +
Sbjct: 181 TWSNRRERRKGRRLLRFEAIWVGEKECSSIIEKVWQQVEGSASLICVIEGISACAIDLGK 240
Query: 64 LN----GSLRGAITRKQNELNFLRNSLVRSTDLNESANWIRAEKKLEMLLDDDDRYWKIC 123
N G ++ +T L FL+ S T L+E + +A ++++ L D+ WK
Sbjct: 241 WNQNSFGHVQKELTSANRRLKFLQESDPYLTILHEHS---KAREEVQKWLQRDELMWKQR 300
Query: 124 SWEDWIHWCDGNTKWFHRKAFARRKTKTIVGLYGEKCSWIE 144
S W+ D N+K+FH KA RR+ IV L + +W +
Sbjct: 301 SRVLWLREGDSNSKFFHSKASTRRRRNNIVQLQDDSGNWFK 338
BLAST of Bhi12G001308 vs. ExPASy TrEMBL
Match:
A0A803PYI0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 8.0e-13
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 0
Query: 19 FEERWVGNDNCKKIIESVWLNSDL-----DVERLNGSLRGAI----TRKQNELN----FL 78
FEE W D CK+I+E W D+ D +R G + A+ +K+ LN L
Sbjct: 664 FEEAWCEEDQCKEIVEKNWREWDVVISGGDYKRKTGQVGRALDSWNRKKKKVLNQKIKKL 723
Query: 79 RNSLVRSTDLNESANWI---RAEKKLEMLLDDDDRYWKICSWEDWIHWCDGNTKWFHRKA 138
+ +L + ++ W+ + EK+L +L+ D++YW CS W+ W D NTK+FHRKA
Sbjct: 724 KTTLTELSSNSDPGAWVEVKKIEKQLNAVLEKDEKYWCQCSRALWLKWGDLNTKFFHRKA 783
Query: 139 FARRKTKTIVGLYGEKCSWIEE 145
ARRK I GL + W E
Sbjct: 784 SARRKKNAIKGLMDDMGVWHSE 805
BLAST of Bhi12G001308 vs. ExPASy TrEMBL
Match:
A0A803PI64 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 3.0e-12
Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = 0
Query: 19 FEERWVGNDNCKKIIESVWLNSDL-----DVERLNGSLRGAI----TRKQNELN----FL 78
FEE W D CK+I+E W D+ D +R G + A+ +K+ LN L
Sbjct: 490 FEEAWCEEDQCKEIVEKNWREWDVVISGGDYKRKTGEVGRALDSWNRKKKKVLNQKIKKL 549
Query: 79 RNSLVRSTDLNESANWI---RAEKKLEMLLDDDDRYWKICSWEDWIHWCDGNTKWFHRKA 138
+ +L+ + ++ W+ + EK+L +L+ D++YW+ S W+ W D NTK+FHRKA
Sbjct: 550 KTTLIELSSSSDPGAWVEVKKIEKQLNAVLEKDEKYWRQRSRALWLKWGDLNTKFFHRKA 609
Query: 139 FARRKTKTIVGLYGEKCSWIEE 145
ARRK I GL + W E
Sbjct: 610 SARRKKNAIKGLMDDIGVWHSE 631
BLAST of Bhi12G001308 vs. ExPASy TrEMBL
Match:
A0A803Q1K6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 8.8e-12
Identity = 50/136 (36.76%), Postives = 66/136 (48.53%), Query Frame = 0
Query: 11 RKGVRLQR--FEERWVGNDNCKKIIESVWLNSDLDVERLNGSLRGAITRKQNELNFLRNS 70
RK +L R FEE W + CK+I+E W D+ V G RK + N
Sbjct: 703 RKKAKLSRFHFEEAWCEEEQCKEIVEKQWSEWDIVVS------GGDFKRKTGQATL--NV 762
Query: 71 LVRSTDLNESANWIRAEKKLEMLLDDDDRYWKICSWEDWIHWCDGNTKWFHRKAFARRKT 130
L S+D + EK+L +L+ D+ YW+ S W+ W D NTK+FHRKA ARRK
Sbjct: 763 LSASSDPGAWMEVKKIEKQLNAVLEKDEMYWRQRSRALWLKWGDSNTKYFHRKASARRKK 822
Query: 131 KTIVGLYGEKCSWIEE 145
I GL W +E
Sbjct: 823 NAIKGLMDSMGVWHQE 830
BLAST of Bhi12G001308 vs. ExPASy TrEMBL
Match:
A0A2P5DYE7 (Endonuclease/exonuclease/phosphatase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_019630 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10
Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 0
Query: 19 FEERWVGNDNCKKIIESVW-----------LNSDLD--VERLNGSLRGAITRKQNELNFL 78
FEE WVG + C IIE VW +N L+ ++L + +Q +L+ L
Sbjct: 94 FEELWVGQNECASIIEKVWDRNTEANTITSVNKKLENCADQLRAWSKLKYGTQQKDLDKL 153
Query: 79 RNSL---VRSTDLNESANWIR-AEKKLEMLLDDDDRYWKICSWEDWIHWCDGNTKWFHRK 138
R+ L R+ L ++A ++ E K+ +L D + YWK SW W+ W D NT++FH K
Sbjct: 154 RSELGLIQRNLSLPDAAERLKVTEDKINKILQDQEIYWKQRSWASWLKWRDRNTRFFHCK 213
Query: 139 AFARRKTKTIVGLYGEKCSWIEEDADL 149
A R+ I GL W +E ++
Sbjct: 214 ASQRQSRNKIWGLIDNNGIWRDEKHEI 240
BLAST of Bhi12G001308 vs. ExPASy TrEMBL
Match:
A0A803PQ16 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 2.2e-10
Identity = 55/164 (33.54%), Postives = 75/164 (45.73%), Query Frame = 0
Query: 6 SNLRRRKGVRLQRFEERWVGNDNCKKIIESVWLNSDL--DVERLNGSLRGAITR------ 65
S RR G R +E W ND C KII VW + + ++ LN L R
Sbjct: 424 SLFRRNWGSRF-HYEHAWADNDECLKIINEVWGDKVMGRPLDNLNHLLSKCGRRLYEWNI 483
Query: 66 KQNELNFLRNSLVRSTDLNESANWI-------------RAEKKLEMLLDDDDRYWKICSW 125
KQ + NF RS +L E +W+ + EK L + + + YW+ S
Sbjct: 484 KQKKANF-----ARSKELKEKIDWLSKSPNMMDWIARQKLEKDLNCVEEKREMYWRQRSR 543
Query: 126 EDWIHWCDGNTKWFHRKAFARRKTKTIVGLYGEKCSWIEEDADL 149
W+ D NTK+FH KA ARRK TI+GLY ++ W + DL
Sbjct: 544 ALWLKHGDQNTKFFHFKASARRKKNTILGLYDDRGHWRTSEKDL 581
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
PON78325.1 | 3.4e-10 | 31.97 | Endonuclease/exonuclease/phosphatase [Parasponia andersonii] | [more] |
XP_023878301.1 | 3.4e-10 | 28.40 | uncharacterized protein LOC111990748 [Quercus suber] | [more] |
XP_030502373.1 | 4.5e-10 | 33.54 | uncharacterized protein LOC115717527 [Cannabis sativa] | [more] |
XP_030502370.1 | 4.5e-10 | 33.54 | uncharacterized protein LOC115717524 [Cannabis sativa] | [more] |
XP_040998143.1 | 2.9e-09 | 32.92 | uncharacterized protein LOC121244182 [Juglans microcarpa x Juglans regia] | [more] |
Match Name | E-value | Identity | Description | |
A0A803PYI0 | 8.0e-13 | 35.21 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PI64 | 3.0e-12 | 34.51 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803Q1K6 | 8.8e-12 | 36.76 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2P5DYE7 | 1.7e-10 | 31.97 | Endonuclease/exonuclease/phosphatase OS=Parasponia andersonii OX=3476 GN=PanWU01... | [more] |
A0A803PQ16 | 2.2e-10 | 33.54 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |