Bhi12G000368 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000368
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 13258737 .. 13260661 (+)
RNA-Seq ExpressionBhi12G000368
SyntenyBhi12G000368
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGGCTTTGAATCCGTTATTTTTACTACTTTCCAATTAAAATTGTGTCTATTATTTTAAATTAAAATTAGACATTAACAGTGAGAATACGACGATTTTTAAAAACCATTAGAAGAGTTTCACTTCTCCGACGCTATGGCGTCTAGAGAGGTTTGTTAAAAACCACATTTTAAGCTCGATAATTTGCCCCTTCCCTTTTGGCCTTCTTTTCCCTTTTACCCTAACCCTTCCTTTCCCCTAGCCGCCGAAACCCCAGCTCCCCTTGCCTTTCCTCTTTCCGCCGGAACCCCAGCCCCTTTCTCCCAACCGCCCAACCCCCTTCTCTCAATCCTCCAATTCCACTCTTTCCTTTCCTCCTTCCTCCTTCTTTATGTTTCTGTTGATCCTCAGTTCATTGTACAAGGAATTCTCCTCAAGGTACGCATCTTATCGCAAGTTCTTCAAATCAACCGCCCCACTCAGGTTGCTGCCACCAACGACTCAGCGCCACCGACCCAGCATCGCCGCTGCCGACCCACCTCTTTTCCTCTTCCATAATCTTCAATCACTGCTGCTATCGGTAATATTTCTTCAATTTTAAATATATTCAGCTATATAATTCAATTAGTTGCTTTCAAAGCTTATATGGATCCATATTTTACTGTGCTCGTAGATAAACCAACAGTTTCATAGGTTTTACATTATCTTTTCCACCATTTTGTTTTTGTTTTTGTTTTTTTTCTGTTAAATTAAATAGAACAACACAAATTTTATTATAATCTGTGGATGAGTTGGATTATTCAAGAGGGGAAGGATTATTCTGTATAGCAGACTAAGTGTGAAATACGAAATTATATTCCTATTGTATTGAATGCTACATTTGAGGTATTTGGACCCATAAAAAGGCCTTTAATTGGCTCTTTCTTTAGCTTCAAACTCCATCAATTCATTCCATACAAAGCCCTTTTTTAATCATTATTCTTCATCTTGCCATCTTGAGCTATCATATTCACTTTTCATTTTTCACTATTTTTCTCTCTTTTATAAATCATTAATGAACTAACTTCAGCTCTTTTATTGAATCATATGCTTAGTTCATCATTCATGACTATGCTTATGTTACATTGTTTTTCCAATGGTATAAGAATTTTACCATTTTACCTTACTTTAGTTATTTAGATTGTTTATTTTAGAAATTTAATCGGATTTGAATGAGGTTGACTGTTACTGTTGTGAAGTTGAAGTGATTAGTTTACTAATTTTAGTGATTTACAATTTTATGGTCTTTTATTTTTGGCCTTGAATGTATTGTATATAACAAACTTAATGTGTAGTTATACGTGCATTTTTCAGTTTGGGGCTGAAGTGGTAACGGAAGAAAAATGGCTTGTATGCAGTGTTGTTATTAAGAAGCCAAGGAGAAAGGTAAGATTTTGTAGTTATACGATGCTCTAGTTTTTCATTATAATGTTCCTAAGTGTATTTATATTGTTGAGAAATATTATATAATATTTTTAGGTTGAGTTTAAAGTTTTATAATGAGTTTGAAATTGGTACAGGGTAAATGCATAATTATGTTTCAATTTGAGTTGAATTATAATACCTTTGTTGTTTAGTTTCTAAATTTTAAGTTTGAGATTAAAGTATGTGTGTGTGAGGTATGTCTAAAGTATAGTTTCCAAATTTAAGTTTGAGTTTGAAATTGGAAGTATGAGATTTTATTCAAGTTATTAATATTACTATGTTTAAGTTTTACTGTGAATTTGAGATTAATATATAGATAAATGCATAGTTATGTTTAAGTTTTGTATTAATGTTACTATTTATATTTTGTAGGTATCTCGAGGTTTATATTCAAGCAAAGGAGTAGAGAAGAATCAAGATATGTTTTGTGAATATTATGAAATGTAGATTTGTATTTTGTAAGTTTTGCAAGGTTAATGTGGA

mRNA sequence

CTGGCTTTGAATCCGTTATTTTTACTACTTTCCAATTAAAATTGTGTCTATTATTTTAAATTAAAATTAGACATTAACAGTGAGAATACGACGATTTTTAAAAACCATTAGAAGAGTTTCACTTCTCCGACGCTATGGCGTCTAGAGAGGTTTGTTAAAAACCACATTTTAAGCTCGATAATTTGCCCCTTCCCTTTTGGCCTTCTTTTCCCTTTTACCCTAACCCTTCCTTTCCCCTAGCCGCCGAAACCCCAGCTCCCCTTGCCTTTCCTCTTTCCGCCGGAACCCCAGCCCCTTTCTCCCAACCGCCCAACCCCCTTCTCTCAATCCTCCAATTCCACTCTTTCCTTTCCTCCTTCCTCCTTCTTTATGTTTCTGTTGATCCTCAGTTCATTGTACAAGGAATTCTCCTCAAGGTACGCATCTTATCGCAAGTTCTTCAAATCAACCGCCCCACTCAGGTTGCTGCCACCAACGACTCAGCGCCACCGACCCAGCATCGCCGCTGCCGACCCACCTCTTTTCCTCTTCCATAATCTTCAATCACTGCTGCTATCGTTTGGGGCTGAAGTGGTAACGGAAGAAAAATGGCTTGTATGCAGTGTTGTTATTAAGAAGCCAAGGAGAAAGGTATCTCGAGGTTTATATTCAAGCAAAGGAGTAGAGAAGAATCAAGATATGTTTTGTGAATATTATGAAATGTAGATTTGTATTTTGTAAGTTTTGCAAGGTTAATGTGGA

Coding sequence (CDS)

ATGTTTCTGTTGATCCTCAGTTCATTGTACAAGGAATTCTCCTCAAGGTACGCATCTTATCGCAAGTTCTTCAAATCAACCGCCCCACTCAGGTTGCTGCCACCAACGACTCAGCGCCACCGACCCAGCATCGCCGCTGCCGACCCACCTCTTTTCCTCTTCCATAATCTTCAATCACTGCTGCTATCGTTTGGGGCTGAAGTGGTAACGGAAGAAAAATGGCTTGTATGCAGTGTTGTTATTAAGAAGCCAAGGAGAAAGGTATCTCGAGGTTTATATTCAAGCAAAGGAGTAGAGAAGAATCAAGATATGTTTTGTGAATATTATGAAATGTAG

Protein sequence

MFLLILSSLYKEFSSRYASYRKFFKSTAPLRLLPPTTQRHRPSIAAADPPLFLFHNLQSLLLSFGAEVVTEEKWLVCSVVIKKPRRKVSRGLYSSKGVEKNQDMFCEYYEM
Homology
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BLAST of Bhi12G000368 vs. NCBI nr
Match: XP_038907014.1 (uncharacterized protein LOC120092857 [Benincasa hispida])

HSP 1 Score: 221.1 bits (562), Expect = 4.8e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MFLLILSSLYKEFSSRYASYRKFFKSTAPLRLLPPTTQRHRPSIAAADPPLFLFHNLQSL 60
           MFLLILSSLYKEFSSRYASYRKFFKSTAPLRLLPPTTQRHRPSIAAADPPLFLFHNLQSL
Sbjct: 1   MFLLILSSLYKEFSSRYASYRKFFKSTAPLRLLPPTTQRHRPSIAAADPPLFLFHNLQSL 60

Query: 61  LLSFGAEVVTEEKWLVCSVVIKKPRRKVSRGLYSSKGVEKNQDMFCEYYEM 112
           LLSFGAEVVTEEKWLVCSVVIKKPRRKVSRGLYSSKGVEKNQDMFCEYYEM
Sbjct: 61  LLSFGAEVVTEEKWLVCSVVIKKPRRKVSRGLYSSKGVEKNQDMFCEYYEM 111

The following BLAST results are available for this feature:
BLAST of Bhi12G000368 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000368 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000368 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038907014.14.8e-54100.00uncharacterized protein LOC120092857 [Benincasa hispida][more]
BLAST of Bhi12G000368 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000368Bhi12M000368mRNA