Bhi11G001188 (gene) Wax gourd (B227) v1

Overview
NameBhi11G001188
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 40795798 .. 40796004 (+)
RNA-Seq ExpressionBhi11G001188
SyntenyBhi11G001188
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCCATGAAACTCCCTCCTTTTTCCGCTGCTGTTGTTTTGGTTCTTGCAATGGTGTGCTTAGAAATGAAGAAGGTTAATGGCATTGAAGATGAGATAGCTCCAATGCCTACTATGGCTGCTGGCTCCGCATTTCCTTCTTCTGTTGCTTTGGCTTTCAGTTCTGTTTTCCCTCTTTTGCTTTGTATTTTTGGTGTCTAA

mRNA sequence

ATGGCTTCCTCCATGAAACTCCCTCCTTTTTCCGCTGCTGTTGTTTTGGTTCTTGCAATGGTGTGCTTAGAAATGAAGAAGGTTAATGGCATTGAAGATGAGATAGCTCCAATGCCTACTATGGCTGCTGGCTCCGCATTTCCTTCTTCTGTTGCTTTGGCTTTCAGTTCTGTTTTCCCTCTTTTGCTTTGTATTTTTGGTGTCTAA

Coding sequence (CDS)

ATGGCTTCCTCCATGAAACTCCCTCCTTTTTCCGCTGCTGTTGTTTTGGTTCTTGCAATGGTGTGCTTAGAAATGAAGAAGGTTAATGGCATTGAAGATGAGATAGCTCCAATGCCTACTATGGCTGCTGGCTCCGCATTTCCTTCTTCTGTTGCTTTGGCTTTCAGTTCTGTTTTCCCTCTTTTGCTTTGTATTTTTGGTGTCTAA

Protein sequence

MASSMKLPPFSAAVVLVLAMVCLEMKKVNGIEDEIAPMPTMAAGSAFPSSVALAFSSVFPLLLCIFGV
Homology
[Close]
BLAST of Bhi11G001188 vs. NCBI nr
Match: KGN58599.1 (hypothetical protein Csa_001638 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-14
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 1  MASSMKLPPF-SAAVVLVLAMVCLEMKKVNGIEDEIAPMPTMAAGSAFPSSVALAFSSVF 60
          MASSM+ P F   AVVLVLAMV +EMKKV+ IEDE+APMP MAAG AFPSSVAL F+ V 
Sbjct: 1  MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60

Query: 61 PLLLCIFGV 69
          PLLLC+FGV
Sbjct: 61 PLLLCVFGV 69

[Close]
BLAST of Bhi11G001188 vs. NCBI nr
Match: KAG6581583.1 (hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 2.8e-12
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 1  MASSMKLPPFSA-AVVLVLAMVCLEMKKVNGIEDEIAPMPTMAAGSAFPSSVALAFSSVF 60
          MA SM+LP + A A VL LAMVC EMKKV+GIE EI+PMP MAAGSA PS+VA AF++VF
Sbjct: 1  MAPSMRLPHYYATAAVLALAMVCFEMKKVHGIEAEISPMPAMAAGSASPSTVAYAFNAVF 60

Query: 61 PLLLCIFG 68
          P LLC FG
Sbjct: 61 P-LLCTFG 67

[Close]
BLAST of Bhi11G001188 vs. ExPASy TrEMBL
Match: A0A0A0LCE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.0e-15
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 1  MASSMKLPPF-SAAVVLVLAMVCLEMKKVNGIEDEIAPMPTMAAGSAFPSSVALAFSSVF 60
          MASSM+ P F   AVVLVLAMV +EMKKV+ IEDE+APMP MAAG AFPSSVAL F+ V 
Sbjct: 1  MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60

Query: 61 PLLLCIFGV 69
          PLLLC+FGV
Sbjct: 61 PLLLCVFGV 69

The following BLAST results are available for this feature:
BLAST of Bhi11G001188 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G001188 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G001188 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58599.11.0e-1473.91hypothetical protein Csa_001638 [Cucumis sativus][more]
KAG6581583.12.8e-1270.59hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Bhi11G001188 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCE55.0e-1573.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M001188Bhi11M001188mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane