Bhi11G000254 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCGTGAAATTCAAATAAAGATGAAACCCTAGCCCCTCTTTCTCTTCTCGTCCCTATTTTCCCTCCCTTCCCCTCTCTCTCTCTCTCTCTCGTTTCGTTCTGCGCATTTCGAGGAATTTTTCCTGAAGTCTCTCGATTCCGAGGTTTGTTTTGATTTCATTTATTCCCTTTTCTCTGTTTTGTTTTTGTTCCATCTCGATTCTTGCTGCGGCGTTTCTTGAGTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAAATTTGTAATAGCCTTGATGTTTTAAGGGGTTTAGGGTTGCTTTTCACCACCTTTCCGAGGGTTTTTATTCTTTCATTCGTTCTTGAATGCTCAAGAAGTCATTTTCTCTTCTTGGGTTTTCAGTTTCTTTGGTGGCTAATGAAATCGGAAGCATTTGAATTTTATATGTGGCAGGTTCTGTTGTTGGGTTGGTTTTAATTATTGATGTTGAGGGTTTATTGGAGTACTAGAAAAAGACGATTTTGGTTGCTGTAAATTGGGGACGTTAAGGAAGGGATGGGGAAGGTTTTTACGAGTGATAGGGAGCCGAAGAAATTGAAGCGGAGAAGACGGTCGAAGGGGTCTGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGCAGCTGCGGTGCAGCAAGGGCTCGGTCGCTAAATCTTGTACTGATCTTGGAAGGAAAAGGGTGGCTGTGTTGGATGCTGGGAAAACTAAGAGGAATGTGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCCGTGAAATTGGTGATGCATATAAGCCATATTAGTACTCCAAGAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTATTATTATTATTATTATACATCTCATTCTTTTCTGTTTCATTGAGGAAACTGTCTTTATCTTAAAGCTACATCAAATGCATAAAGTTGAATATTTTCTGTTTCTTTTCAAATTGTATGAATCTTCTTTAGGTTGCATTATTTTTGTGCTATGAGGGAGGCCGGCTTATAGAGATCCCCACGATAGCTTGTTATTTGAGCTGTCAATTGTGAAATGCTTGTTTATTTACTGGACGATGGCGTTTTTAGGTGGAATTTTCAATGGTTTTTTCTCTAGTGTCTAGCAGGTGTTTCTTGTTTTAATGAGAAGAAAAAACTTTGTTGCGAGCCTTTTCATTTTGTGAGGATATTATGAGAAAAGAGTACTCATGACCTACTTTTGTGTGTGTGTGTGTGTCTGTTTGTTCCCAACATGTGGAGGCTGGCAACTTGACCTACTTTTAGTAAATGGCCAAAACCTTTTTGTTTAGAGATGATGGTGTTCAGCAACTTTAGCTAAAACTCTAGCTGTATACTTCTTAATTACAAACCGACAAAGCCAAAGTTTGAACTTTTAAGGACATGTTTCACGGCATAGAAATTTGATGCACTCATGTTGATCTAAACTGGATATTTGCTGATGTATCTGTGTCTATACTCTTTGAACATGATCTTACACGTAATGGTAATTTGCAGTATTAATGGATATTAATTATCTGCGTTGTTTGGCTGCTGATGTTCTGATGTTTTCAATTTATAACTTCAAGGTGAAAATACTTTGCCATTTACACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAGGCTGTAAGTTTTTGTCTGTCTGCTTCAAATGTACCACAACTTTTGGAGGTTGATTATCTTTGTTTCTCTCAGGTTTTGCTGGCTAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCTACTGAACACTGGCCCTTTGTTAAGTTAGTATTGATTTAAATATTTCGTTTGTTTGGCATCTTTATGTTAGGGATAAGCTACAAAACACCTCTAATTATTACTTTAAAAGATAAACTACTTTGGGTAGGAACCTGTTAGAACTTTGGATGGAAATTTGGGCTTGGAATATGTGTGGTTGTGTTTCTGTTCCAGCTTTCATTCCAAATCACTACCACACAGATTAAAGTTCCAATTTTCCTTGAACATTCTAATGTAGCTTGATTCCAAGGGTAGTTTTGAAACACGCTTATAAAGAGTAATCTTAATATCGCAAGTTTCAACTTTTGAATGAATAATGGTATTTTTGAAACACCATTTTGTAATCTTGTCTTGTCCTATTGATCTGACTTCAAACATTGATTTACAGTAAGGGAGAGGGCAAAGGGTTGTTATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCCCCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCTTTTCCTCCAAGATGCATGGTTCCATCTGTTCTATCAAAACCTCTCTGCAAATCCTTGGCCTCAAACCGGGTGTTGTTTTACGAGGATGAGTTGTGCCAAGCAGTTGCTCAAAATAAACTTCGTTGATTGTAGTGGCTGGCAATTTCTCGTTGTCTCTTGTTTGTGTATATAGGGGATTTTTACCTTTTTGCCTGTAGCTGGTCCAGCCAATATAGGAATTCTACAAATTTTGTAGCCTGCGTTGATGCAGATTTAGGTATCATGGAATGGAACTTCTTGTTCTGTTGGAGTGGGGGTTGAAAGTATTCAGACTGTAGCTGTGGGAATAATCTATTTCGAACTTGTTACTTGTATAGTTCTATATATATATATATATTCTAAAGAGTGGTTTTATGCTA CTTTCGTGAAATTCAAATAAAGATGAAACCCTAGCCCCTCTTTCTCTTCTCGTCCCTATTTTCCCTCCCTTCCCCTCTCTCTCTCTCTCTCTCGTTTCGTTCTGCGCATTTCGAGGAATTTTTCCTGAAGTCTCTCGATTCCGAGGTTCTGTTGTTGGGTTGGTTTTAATTATTGATGTTGAGGGTTTATTGGAGTACTAGAAAAAGACGATTTTGGTTGCTGTAAATTGGGGACGTTAAGGAAGGGATGGGGAAGGTTTTTACGAGTGATAGGGAGCCGAAGAAATTGAAGCGGAGAAGACGGTCGAAGGGGTCTGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGCAGCTGCGGTGCAGCAAGGGCTCGGTCGCTAAATCTTGTACTGATCTTGGAAGGAAAAGGGTGGCTGTGTTGGATGCTGGGAAAACTAAGAGGAATGTGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCCGTGAAATTGGTGATGCATATAAGCCATATTAGTACTCCAAGAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTGAAAATACTTTGCCATTTACACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAGGCTGTTTTGCTGGCTAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCTACTGAACACTGGCCCTTTGTTAATAAGGGAGAGGGCAAAGGGTTGTTATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCCCCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCTTTTCCTCCAAGATGCATGGTTCCATCTGTTCTATCAAAACCTCTCTGCAAATCCTTGGCCTCAAACCGGGTGTTGTTTTACGAGGATGAGTTGTGCCAAGCAGTTGCTCAAAATAAACTTCGTTGATTGTAGTGGCTGGCAATTTCTCGTTGTCTCTTGTTTGTGTATATAGGGGATTTTTACCTTTTTGCCTGTAGCTGGTCCAGCCAATATAGGAATTCTACAAATTTTGTAGCCTGCGTTGATGCAGATTTAGGTATCATGGAATGGAACTTCTTGTTCTGTTGGAGTGGGGGTTGAAAGTATTCAGACTGTAGCTGTGGGAATAATCTATTTCGAACTTGTTACTTGTATAGTTCTATATATATATATATATTCTAAAGAGTGGTTTTATGCTA ATGGGGAAGGTTTTTACGAGTGATAGGGAGCCGAAGAAATTGAAGCGGAGAAGACGGTCGAAGGGGTCTGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGCAGCTGCGGTGCAGCAAGGGCTCGGTCGCTAAATCTTGTACTGATCTTGGAAGGAAAAGGGTGGCTGTGTTGGATGCTGGGAAAACTAAGAGGAATGTGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCCGTGAAATTGGTGATGCATATAAGCCATATTAGTACTCCAAGAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTGAAAATACTTTGCCATTTACACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAGGCTGTTTTGCTGGCTAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCTACTGAACACTGGCCCTTTGTTAATAAGGGAGAGGGCAAAGGGTTGTTATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCCCCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCTTTTCCTCCAAGATGCATGGTTCCATCTGTTCTATCAAAACCTCTCTGCAAATCCTTGGCCTCAAACCGGGTGTTGTTTTACGAGGATGAGTTGTGCCAAGCAGTTGCTCAAAATAAACTTCGTTGA MGKVFTSDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHISHISTPRTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGEGKGLLLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLSKPLCKSLASNRVLFYEDELCQAVAQNKLR Homology
BLAST of Bhi11G000254 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein ) HSP 1 Score: 290.4 bits (742), Expect = 1.4e-78 Identity = 168/321 (52.34%), Postives = 204/321 (63.55%), Query Frame = 0
BLAST of Bhi11G000254 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein ) HSP 1 Score: 63.5 bits (153), Expect = 2.9e-10 Identity = 28/57 (49.12%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Bhi11G000254 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.7e-10 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 0
BLAST of Bhi11G000254 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08 Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Bhi11G000254 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein ) HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06 Identity = 19/44 (43.18%), Postives = 35/44 (79.55%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.0e-77 Identity = 168/321 (52.34%), Postives = 204/321 (63.55%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.0e-09 Identity = 28/57 (49.12%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 5.3e-09 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Bhi11G000254 vs. NCBI nr
Match: XP_038903596.1 (F-box protein At4g35930 [Benincasa hispida]) HSP 1 Score: 527.7 bits (1358), Expect = 5.8e-146 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Bhi11G000254 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus]) HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141 Identity = 256/266 (96.24%), Postives = 262/266 (98.50%), Query Frame = 0
BLAST of Bhi11G000254 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-140 Identity = 255/266 (95.86%), Postives = 260/266 (97.74%), Query Frame = 0
BLAST of Bhi11G000254 vs. NCBI nr
Match: XP_022145262.1 (F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g35930 [Momordica charantia]) HSP 1 Score: 497.7 bits (1280), Expect = 6.4e-137 Identity = 247/265 (93.21%), Postives = 259/265 (97.74%), Query Frame = 0
BLAST of Bhi11G000254 vs. NCBI nr
Match: XP_022943859.1 (F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027800.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 475.7 bits (1223), Expect = 2.6e-130 Identity = 238/267 (89.14%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 7.1e-142 Identity = 256/266 (96.24%), Postives = 262/266 (98.50%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 6.0e-141 Identity = 255/266 (95.86%), Postives = 260/266 (97.74%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 6.0e-141 Identity = 255/266 (95.86%), Postives = 260/266 (97.74%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy TrEMBL
Match: A0A6J1CW37 (F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 3.1e-137 Identity = 247/265 (93.21%), Postives = 259/265 (97.74%), Query Frame = 0
BLAST of Bhi11G000254 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130 Identity = 238/267 (89.14%), Postives = 253/267 (94.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|