Bhi11G000141 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G000141
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr11: 3676138 .. 3676347 (+)
RNA-Seq Expression	Bhi11G000141
Synteny	Bhi11G000141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTATGTATTAAGTGAACTGATGACAATATATAATAAAAATGACAGGCATCAAAGAAGTAACAGAGCATTTTATGCCAAGAAAATTAAATCAAATATGGTGATGCTGAAAGAGGATGGAGGGGTTGATATGATCAATAGGGAGCCTGAATTTCCTACTGATTCCACTTTGGATTCCAAACAATCTTACTATTCATTAAATAGTTAA

mRNA sequence

ATGAATTATGTATTAAGTGAACTGATGACAATATATAATAAAAATGACAGGCATCAAAGAAGTAACAGAGCATTTTATGCCAAGAAAATTAAATCAAATATGGTGATGCTGAAAGAGGATGGAGGGGTTGATATGATCAATAGGGAGCCTGAATTTCCTACTGATTCCACTTTGGATTCCAAACAATCTTACTATTCATTAAATAGTTAA

Coding sequence (CDS)

ATGAATTATGTATTAAGTGAACTGATGACAATATATAATAAAAATGACAGGCATCAAAGAAGTAACAGAGCATTTTATGCCAAGAAAATTAAATCAAATATGGTGATGCTGAAAGAGGATGGAGGGGTTGATATGATCAATAGGGAGCCTGAATTTCCTACTGATTCCACTTTGGATTCCAAACAATCTTACTATTCATTAAATAGTTAA

Protein sequence

MNYVLSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSYYSLNS

Homology

[Close]

BLAST of Bhi11G000141 vs. NCBI nr
Match: XP_038903690.1 (uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 7.4e-21
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY
Sbjct: 143 ISSLHATWVVFDKHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 202

Query: 65  YSLNS 70
           YSLNS
Sbjct: 203 YSLNS 207

[Close]

BLAST of Bhi11G000141 vs. NCBI nr
Match: XP_038903689.1 (uncharacterized protein LOC120090215 isoform X1 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 7.4e-21
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY
Sbjct: 170 ISSLHATWVVFDKHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 229

Query: 65  YSLNS 70
           YSLNS
Sbjct: 230 YSLNS 234

[Close]

BLAST of Bhi11G000141 vs. NCBI nr
Match: XP_008448679.1 (PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo])

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQR NR++YAKKIKSNMVML+EDG VDMINREP+FP+ STLDS+QSY
Sbjct: 143 ISSLHATWVVFDKHQRGNRSYYAKKIKSNMVMLREDGSVDMINREPDFPSGSTLDSRQSY 202

Query: 65  YSLNS 70
           YSLNS
Sbjct: 203 YSLNS 207

[Close]

BLAST of Bhi11G000141 vs. NCBI nr
Match: XP_008448680.1 (PREDICTED: uncharacterized protein LOC103490778 isoform X2 [Cucumis melo])

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQR NR++YAKKIKSNMVML+EDG VDMINREP+FP+ STLDS+QSY
Sbjct: 135 ISSLHATWVVFDKHQRGNRSYYAKKIKSNMVMLREDGSVDMINREPDFPSGSTLDSRQSY 194

Query: 65  YSLNS 70
           YSLNS
Sbjct: 195 YSLNS 199

[Close]

BLAST of Bhi11G000141 vs. NCBI nr
Match: XP_011652714.1 (uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus] >KAE8650025.1 hypothetical protein Csa_010541 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQR NRAFYAKKIKSNMVML+EDG VDMINREPEFP+ STLDS+QS+
Sbjct: 151 ISSLHATWVVFDKHQRGNRAFYAKKIKSNMVMLREDGSVDMINREPEFPSGSTLDSRQSF 210

Query: 65  YS 67
           YS
Sbjct: 211 YS 212

[Close]

BLAST of Bhi11G000141 vs. ExPASy TrEMBL
Match: A0A1S3BJN1 (uncharacterized protein LOC103490778 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490778 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.4e-17
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQR NR++YAKKIKSNMVML+EDG VDMINREP+FP+ STLDS+QSY
Sbjct: 143 ISSLHATWVVFDKHQRGNRSYYAKKIKSNMVMLREDGSVDMINREPDFPSGSTLDSRQSY 202

Query: 65  YSLNS 70
           YSLNS
Sbjct: 203 YSLNS 207

[Close]

BLAST of Bhi11G000141 vs. ExPASy TrEMBL
Match: A0A1S3BKA1 (uncharacterized protein LOC103490778 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490778 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.4e-17
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 5   LSELMTIYNKNDRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSY 64
           +S L   +   D+HQR NR++YAKKIKSNMVML+EDG VDMINREP+FP+ STLDS+QSY
Sbjct: 135 ISSLHATWVVFDKHQRGNRSYYAKKIKSNMVMLREDGSVDMINREPDFPSGSTLDSRQSY 194

Query: 65  YSLNS 70
           YSLNS
Sbjct: 195 YSLNS 199

[Close]

BLAST of Bhi11G000141 vs. ExPASy TrEMBL
Match: A0A6J1L5D0 (uncharacterized protein LOC111500162 OS=Cucurbita maxima OX=3661 GN=LOC111500162 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.0e-15
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 16  DRHQRSNRAFYAKKIKSNMVMLKEDGGVDMINREPEFPTDSTLDSKQSYYSLNS 70
           D+HQR+NRAFYAKK+K NMVMLKEDGGVDMINREPEFP+ ST DSK SY +L S
Sbjct: 153 DKHQRNNRAFYAKKVKCNMVMLKEDGGVDMINREPEFPSASTSDSKPSYSTLTS 206

The following BLAST results are available for this feature:

BLAST of Bhi11G000141 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G000141 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G000141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903690.1	7.4e-21	84.62	uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida]	[more]
XP_038903689.1	7.4e-21	84.62	uncharacterized protein LOC120090215 isoform X1 [Benincasa hispida]	[more]
XP_008448679.1	1.1e-16	70.77	PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo]	[more]
XP_008448680.1	1.1e-16	70.77	PREDICTED: uncharacterized protein LOC103490778 isoform X2 [Cucumis melo]	[more]
XP_011652714.1	1.2e-15	72.58	uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus] >KAE8650025.1 ...	[more]

BLAST of Bhi11G000141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJN1	5.4e-17	70.77	uncharacterized protein LOC103490778 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BKA1	5.4e-17	70.77	uncharacterized protein LOC103490778 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1L5D0	3.0e-15	79.63	uncharacterized protein LOC111500162 OS=Cucurbita maxima OX=3661 GN=LOC111500162...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000141	Bhi11M000141	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0008652	cellular amino acid biosynthetic process
molecular_function	GO:0003856	3-dehydroquinate synthase activity
molecular_function	GO:0016491	oxidoreductase activity