Bhi11G000069 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G000069
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Location	chr11: 1901714 .. 1903750 (+)
RNA-Seq Expression	Bhi11G000069
Synteny	Bhi11G000069

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGAAACTGACAACTACAGGTACAAGTGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAGCTTAGAAGTGGAGCTCTCTCCCTCCCTTCTCCATTCTTCTTCATTCCACGCCATAACAATGTCTTCAATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACAGAACCCATTTCTCCTTTAGACCCTTTTCTTCTCTCAGAACCAGAAACCCTTCTTCCTCCTCTCTCTTCACCATCAGGGCCACTGCTGACAATGGCGCTGGAATTTCAGGTGGTTCAGCCGCTGTTGCAGTAGAAACCCCCGTCGAACAGAAGGATCCGGAGCCGGCCAAGGCTGTATCGGAAGAGCAGGAGAGTCTCGCTGGAACCAATGGGTCGGTAGCGGCTGCTGAAGAAGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGATTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCCGGTAACCTTCATTCTTCTTTGGTTCTGAGAAATTAAAAATTGCCCTATATTCTCTGTTGATTTTGCTTCTAATTGCATAACTAAATCTAGATGTTTAATGGGGGTGCATCGGAAATTGAGTGGAAGATTGCAAATAGATACATGCATTGTCTGAAATGCTTCTTGGGGGAAATCTTGATTCTGCAAGTTCTGATTATGTTCAAATTGTAATGTAATTTCTTGGTGATGCTTGAGCATTTACTTGATCTTTCCATCAGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTATTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGTATAATATTAACATATTTGTATGGTTGTTTTCTCTTGCTTTCTTAAAGCTTGTCTGAGTCAAATAATGTTAAAACATGTTTGTAGGCTTGTTTTTTCAAGCGAGCTTAGATCCATGGTAATTGATATCGAAGTTGGAGGTTCAAATCTCCATACTCCATTTGCTGTACCAAAGAAAATAGATAGATTTAGGGTATGCTTGGATCGAAACATGCTTTTAATGATTCAAAATCAATTTGATTGTAGGTAAATCATGTTTAAAAGTGTAAAATCAAACATTAAGTTGATTTTGAATAATTAAATGCATATTTAAGAGTAATTTTGATTTTAACCATGTTAAAATTACTATGGTATTCTCATTCATGTTTGTGAATGACGATTTAAATGCAGGTCATAACATTGGTTTCTCTGTCATTTTTATCGCAATTCTTAAAAGCAATTTTGGAACAAGAACAAGTAAAATGATTTTAATACAGCTTTCAAGACAAGTCCTTGGTTTTTTTTCAAGATCCTGAACTTCTATATAGCGATGAACAAAGTATCATATCATATCTACTATAATGTTGAAGTAAATTCGAGCCGTGAAATGGTTTTCGATGCAGGCCGTGCAGCCATGGTAGGGTTCTTCATGGCTTACTTCGTGGATAGCTTGACTGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTCGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTTTAAAGAAGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAAACTCAGGCTCAGGCAAAATGTAATGAGGCAAAAGTTGCCTGTTTCTTGTTTTGTATTAATTATGTTTGTATCTCTAAGATTTGGGCTAAGTAGAGAAGGATAGAGCTCTGAAAGATACTAAATTTTTAGGCCTCAGTTTAATGTATCTTTAAGTTGAGAGTTTCAATGAAAACATCACTCAAAAAGCTTTGATCTTTCTGGAAGTATGCTTTTCAGGCTTCAGCTATTCTAAAGGACCTTATTACCAGATTTAGCCTAATCAGTTTCCCAAACATCCA

mRNA sequence

TAGGAAACTGACAACTACAGGTACAAGTGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAGCTTAGAAGTGGAGCTCTCTCCCTCCCTTCTCCATTCTTCTTCATTCCACGCCATAACAATGTCTTCAATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACAGAACCCATTTCTCCTTTAGACCCTTTTCTTCTCTCAGAACCAGAAACCCTTCTTCCTCCTCTCTCTTCACCATCAGGGCCACTGCTGACAATGGCGCTGGAATTTCAGGTGGTTCAGCCGCTGTTGCAGTAGAAACCCCCGTCGAACAGAAGGATCCGGAGCCGGCCAAGGCTGTATCGGAAGAGCAGGAGAGTCTCGCTGGAACCAATGGGTCGGTAGCGGCTGCTGAAGAAGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGATTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTATTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGCCGTGCAGCCATGGTAGGGTTCTTCATGGCTTACTTCGTGGATAGCTTGACTGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTCGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTTTAAAGAAGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAAACTCAGGCTCAGGCAAAATGTAATGAGGCAAAAGTTGCCTGTTTCTTGTTTTGTATTAATTATGTTTGTATCTCTAAGATTTGGGCTAAGTAGAGAAGGATAGAGCTCTGAAAGATACTAAATTTTTAGGCCTCAGTTTAATGTATCTTTAAGTTGAGAGTTTCAATGAAAACATCACTCAAAAAGCTTTGATCTTTCTGGAAGTATGCTTTTCAGGCTTCAGCTATTCTAAAGGACCTTATTACCAGATTTAGCCTAATCAGTTTCCCAAACATCCA

Coding sequence (CDS)

ATGTCTTCAATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACAGAACCCATTTCTCCTTTAGACCCTTTTCTTCTCTCAGAACCAGAAACCCTTCTTCCTCCTCTCTCTTCACCATCAGGGCCACTGCTGACAATGGCGCTGGAATTTCAGGTGGTTCAGCCGCTGTTGCAGTAGAAACCCCCGTCGAACAGAAGGATCCGGAGCCGGCCAAGGCTGTATCGGAAGAGCAGGAGAGTCTCGCTGGAACCAATGGGTCGGTAGCGGCTGCTGAAGAAGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGATTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTATTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGCCGTGCAGCCATGGTAGGGTTCTTCATGGCTTACTTCGTGGATAGCTTGACTGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTCGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTTTAAAGAAGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAAACTCAGGCTCAGGCAAAATGTAA

Protein sequence

MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDENSGSGKM

Homology

[Close]

BLAST of Bhi11G000069 vs. TAIR 10
Match: AT4G17600.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 289.7 bits (740), Expect = 2.4e-78
Identity = 161/269 (59.85%), Postives = 195/269 (72.49%), Query Frame = 0


Query: 4   MALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGGSAA 63
           MALFSP    S+L  + +    FSF   SS R      S L   RA++D+G+  +  +AA
Sbjct: 1   MALFSPPISSSSLQ-NPNFIPKFSFSLLSSNR-----FSLLSVTRASSDSGS--TSPTAA 60

Query: 64  VAVETP----VEQKDPEPAKAVSEEQESLAGTNGSVAAAE--EVEVVSKFEDPKWINGTW 123
           V+VE P    V  K+P  +    +++E+    N +V   E    E V KF+D +WINGTW
Sbjct: 61  VSVEAPEPVEVIVKEPPQSTPAVKKEETATAKNVAVEGEEMKTTESVVKFQDARWINGTW 120

Query: 124 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 183
           DL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPE
Sbjct: 121 DLKQFEKDGKTDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIPWWAWIKRYHLPE 180

Query: 184 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 243
           AELLNGRAAM+GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK
Sbjct: 181 AELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDVDKLK 240

Query: 244 KLIDETTFYDKQWQATWQ---DENSGSGK 264
            L DETT YDKQWQA W+   DE+ GS K
Sbjct: 241 NLFDETTLYDKQWQAAWKNDDDESLGSKK 261

[Close]

BLAST of Bhi11G000069 vs. TAIR 10
Match: AT5G47110.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 275.4 bits (703), Expect = 4.8e-74
Identity = 151/264 (57.20%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 3   SMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTI-RATADNGAGIS--- 62
           SMALFSP    S  +P        +  P  S    +    SL ++ RA++DNG       
Sbjct: 4   SMALFSPPISSSLQNP--------NLIPKISTSLLSTKRFSLISVPRASSDNGTTSPVVE 63

Query: 63  -GGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTW 122
               A+VAVE  V  K P  + + SE      G  G  A     E V K+++ KW+NGTW
Sbjct: 64  IPKPASVAVE-EVPVKSPAESSSASEN-----GAVGGEATDSSTETVIKYQNAKWVNGTW 123

Query: 123 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 182
           DL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPE
Sbjct: 124 DLKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIPWWAWMKRYHLPE 183

Query: 183 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 242
           AELLNGRAAM+GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK
Sbjct: 184 AELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLK 243

Query: 243 KLIDETTFYDKQWQATWQDENSGS 262
            L DETT YDKQWQA W++ +S +
Sbjct: 244 DLFDETTLYDKQWQAAWKEPDSST 253

[Close]

BLAST of Bhi11G000069 vs. ExPASy Swiss-Prot
Match: Q9SYX1 (Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.1 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.4e-77
Identity = 161/269 (59.85%), Postives = 195/269 (72.49%), Query Frame = 0


Query: 4   MALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGGSAA 63
           MALFSP    S+L  + +    FSF   SS R      S L   RA++D+G+  +  +AA
Sbjct: 1   MALFSPPISSSSLQ-NPNFIPKFSFSLLSSNR-----FSLLSVTRASSDSGS--TSPTAA 60

Query: 64  VAVETP----VEQKDPEPAKAVSEEQESLAGTNGSVAAAE--EVEVVSKFEDPKWINGTW 123
           V+VE P    V  K+P  +    +++E+    N +V   E    E V KF+D +WINGTW
Sbjct: 61  VSVEAPEPVEVIVKEPPQSTPAVKKEETATAKNVAVEGEEMKTTESVVKFQDARWINGTW 120

Query: 124 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 183
           DL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPE
Sbjct: 121 DLKQFEKDGKTDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIPWWAWIKRYHLPE 180

Query: 184 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 243
           AELLNGRAAM+GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK
Sbjct: 181 AELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDVDKLK 240

Query: 244 KLIDETTFYDKQWQATWQ---DENSGSGK 264
            L DETT YDKQWQA W+   DE+ GS K
Sbjct: 241 NLFDETTLYDKQWQAAWKNDDDESLGSKK 261

[Close]

BLAST of Bhi11G000069 vs. ExPASy Swiss-Prot
Match: Q6NKS4 (Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.2 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.7e-73
Identity = 151/264 (57.20%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 3   SMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTI-RATADNGAGIS--- 62
           SMALFSP    S  +P        +  P  S    +    SL ++ RA++DNG       
Sbjct: 4   SMALFSPPISSSLQNP--------NLIPKISTSLLSTKRFSLISVPRASSDNGTTSPVVE 63

Query: 63  -GGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTW 122
               A+VAVE  V  K P  + + SE      G  G  A     E V K+++ KW+NGTW
Sbjct: 64  IPKPASVAVE-EVPVKSPAESSSASEN-----GAVGGEATDSSTETVIKYQNAKWVNGTW 123

Query: 123 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 182
           DL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPE
Sbjct: 124 DLKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIPWWAWMKRYHLPE 183

Query: 183 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 242
           AELLNGRAAM+GFFMAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK
Sbjct: 184 AELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLK 243

Query: 243 KLIDETTFYDKQWQATWQDENSGS 262
            L DETT YDKQWQA W++ +S +
Sbjct: 244 DLFDETTLYDKQWQAAWKEPDSST 253

[Close]

BLAST of Bhi11G000069 vs. NCBI nr
Match: XP_038906355.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 521.9 bits (1343), Expect = 3.1e-144
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGG 60
           MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGG
Sbjct: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGG 60

Query: 61  SAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLN 120
           SAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLN
Sbjct: 61  SAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLN 120

Query: 121 QFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAEL 180
           QFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAEL
Sbjct: 121 QFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAEL 180

Query: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI 240
           LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI
Sbjct: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI 240

Query: 241 DETTFYDKQWQATWQDENSGSGKM 265
           DETTFYDKQWQATWQDENSGSGKM
Sbjct: 241 DETTFYDKQWQATWQDENSGSGKM 264

[Close]

BLAST of Bhi11G000069 vs. NCBI nr
Match: XP_004147237.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus] >KGN55822.1 hypothetical protein Csa_009505 [Cucumis sativus])

HSP 1 Score: 491.9 bits (1265), Expect = 3.5e-135
Identity = 254/267 (95.13%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNP--SSSSLFTIRATADNGAGIS 60
           MSSMALFSPSSHLST SP SHH THFSFRPFSSLRTRNP  SSSSLFTIRATADNGAGIS
Sbjct: 1   MSSMALFSPSSHLSTFSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGIS 60

Query: 61  GGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEE-VEVVSKFEDPKWINGTW 120
           GGSA V+VETPVEQKDPEPAK   EEQESLAGTNGSVAAAEE VEVVSKFEDPKW+NGTW
Sbjct: 61  GGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGTW 120

Query: 121 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 180
           DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE
Sbjct: 121 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 180

Query: 181 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 240
           AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK
Sbjct: 181 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 240

Query: 241 KLIDETTFYDKQWQATWQDENSGSGKM 265
           KLIDETTFYDKQWQATWQDE SGSGKM
Sbjct: 241 KLIDETTFYDKQWQATWQDETSGSGKM 266

[Close]

BLAST of Bhi11G000069 vs. NCBI nr
Match: XP_008448777.1 (PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo])

HSP 1 Score: 484.6 bits (1246), Expect = 5.5e-133
Identity = 253/269 (94.05%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNP---SSSSLFTIRATADNGAGI 60
           MSSMALFSPSSHLSTLSPSSHH THFSFRPFSSLRTRNP   SSSSLFTIRATADNGAGI
Sbjct: 1   MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGI 60

Query: 61  SGGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEE-VEVVSKFEDPKWINGT 120
           SGGSA VAVETPVEQKDPEPA      +ESLAGTNGSVAAAEE VEVVSKFEDPKW+NGT
Sbjct: 61  SGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGT 120

Query: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180
           WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP
Sbjct: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180

Query: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240
           EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL
Sbjct: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240

Query: 241 KKLIDETTFYDKQWQATWQDE-NSGSGKM 265
           KKLIDETTFYDKQWQATWQDE +SGSGKM
Sbjct: 241 KKLIDETTFYDKQWQATWQDETSSGSGKM 263

[Close]

BLAST of Bhi11G000069 vs. NCBI nr
Match: KAA0041046.1 (uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa] >TYK12056.1 uncharacterized protein E5676_scaffold1017G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132
Identity = 252/269 (93.68%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNP---SSSSLFTIRATADNGAGI 60
           MSSMALFSPSSHLSTLSPSSHH THFSFRPFSSLRTRNP   SSSSLFTIRATADNGAGI
Sbjct: 1   MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGI 60

Query: 61  SGGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEE-VEVVSKFEDPKWINGT 120
           SGGSA VAVETPVEQKDPEPA      +ESLAGTNGSVAAAEE VEVVSKFEDPKW+NGT
Sbjct: 61  SGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGT 120

Query: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180
           WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP
Sbjct: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180

Query: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240
           EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL
Sbjct: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240

Query: 241 KKLIDETTFYDKQWQATWQDE-NSGSGKM 265
           KKLIDETTFYDKQWQATWQDE +SGSGK+
Sbjct: 241 KKLIDETTFYDKQWQATWQDETSSGSGKI 263

[Close]

BLAST of Bhi11G000069 vs. NCBI nr
Match: XP_022923520.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 436.4 bits (1121), Expect = 1.7e-118
Identity = 226/264 (85.61%), Postives = 237/264 (89.77%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGG 60
           MSSMALFSP S LS+LSPSSHHRTHF  RPFSSLR+RNPSS         ADNGAGISGG
Sbjct: 1   MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS------WVAADNGAGISGG 60

Query: 61  SAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLN 120
           S  VAVE+ V QKDPEP   V E+QE LA TNGSVAA EEV VVSKFEDPKW+NGTWDLN
Sbjct: 61  S--VAVESAVVQKDPEP---VVEKQEILAETNGSVAAVEEVVVVSKFEDPKWVNGTWDLN 120

Query: 121 QFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAEL 180
           QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+
Sbjct: 121 QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEI 180

Query: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI 240
           LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLI
Sbjct: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLI 240

Query: 241 DETTFYDKQWQATWQDENSGSGKM 265
           DETTFYDKQWQATWQDE  GSGK+
Sbjct: 241 DETTFYDKQWQATWQDETKGSGKV 253

[Close]

BLAST of Bhi11G000069 vs. ExPASy TrEMBL
Match: A0A0A0L5D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017160 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 254/267 (95.13%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNP--SSSSLFTIRATADNGAGIS 60
           MSSMALFSPSSHLST SP SHH THFSFRPFSSLRTRNP  SSSSLFTIRATADNGAGIS
Sbjct: 1   MSSMALFSPSSHLSTFSP-SHHTTHFSFRPFSSLRTRNPSSSSSSLFTIRATADNGAGIS 60

Query: 61  GGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEE-VEVVSKFEDPKWINGTW 120
           GGSA V+VETPVEQKDPEPAK   EEQESLAGTNGSVAAAEE VEVVSKFEDPKW+NGTW
Sbjct: 61  GGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGTW 120

Query: 121 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 180
           DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE
Sbjct: 121 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 180

Query: 181 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 240
           AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK
Sbjct: 181 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 240

Query: 241 KLIDETTFYDKQWQATWQDENSGSGKM 265
           KLIDETTFYDKQWQATWQDE SGSGKM
Sbjct: 241 KLIDETTFYDKQWQATWQDETSGSGKM 266

[Close]

BLAST of Bhi11G000069 vs. ExPASy TrEMBL
Match: A0A1S3BLD8 (uncharacterized protein LOC103490842 OS=Cucumis melo OX=3656 GN=LOC103490842 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.7e-133
Identity = 253/269 (94.05%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNP---SSSSLFTIRATADNGAGI 60
           MSSMALFSPSSHLSTLSPSSHH THFSFRPFSSLRTRNP   SSSSLFTIRATADNGAGI
Sbjct: 1   MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGI 60

Query: 61  SGGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEE-VEVVSKFEDPKWINGT 120
           SGGSA VAVETPVEQKDPEPA      +ESLAGTNGSVAAAEE VEVVSKFEDPKW+NGT
Sbjct: 61  SGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGT 120

Query: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180
           WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP
Sbjct: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180

Query: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240
           EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL
Sbjct: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240

Query: 241 KKLIDETTFYDKQWQATWQDE-NSGSGKM 265
           KKLIDETTFYDKQWQATWQDE +SGSGKM
Sbjct: 241 KKLIDETTFYDKQWQATWQDETSSGSGKM 263

[Close]

BLAST of Bhi11G000069 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.8e-133
Identity = 252/269 (93.68%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNP---SSSSLFTIRATADNGAGI 60
           MSSMALFSPSSHLSTLSPSSHH THFSFRPFSSLRTRNP   SSSSLFTIRATADNGAGI
Sbjct: 1   MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGI 60

Query: 61  SGGSAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEE-VEVVSKFEDPKWINGT 120
           SGGSA VAVETPVEQKDPEPA      +ESLAGTNGSVAAAEE VEVVSKFEDPKW+NGT
Sbjct: 61  SGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGT 120

Query: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180
           WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP
Sbjct: 121 WDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLP 180

Query: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240
           EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL
Sbjct: 181 EAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETL 240

Query: 241 KKLIDETTFYDKQWQATWQDE-NSGSGKM 265
           KKLIDETTFYDKQWQATWQDE +SGSGK+
Sbjct: 241 KKLIDETTFYDKQWQATWQDETSSGSGKI 263

[Close]

BLAST of Bhi11G000069 vs. ExPASy TrEMBL
Match: A0A6J1HQ78 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465096 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.4e-119
Identity = 227/264 (85.98%), Postives = 237/264 (89.77%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGG 60
           MSSMALFSP S LS+LSPSSHHRTHF  RPFSSLR+RNPSS         ADNGAGISGG
Sbjct: 1   MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS------WVAADNGAGISGG 60

Query: 61  SAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLN 120
           S  VAVE  V QKDPEPA    E++ESLA TNGSVAA EEV VVSKFEDPKW+NGTWDLN
Sbjct: 61  S--VAVEPAVVQKDPEPA---VEKKESLAETNGSVAAVEEVVVVSKFEDPKWVNGTWDLN 120

Query: 121 QFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAEL 180
           QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+
Sbjct: 121 QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEI 180

Query: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI 240
           LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI
Sbjct: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI 240

Query: 241 DETTFYDKQWQATWQDENSGSGKM 265
           DETTFYDKQWQATWQDE  GSGK+
Sbjct: 241 DETTFYDKQWQATWQDETKGSGKV 253

[Close]

BLAST of Bhi11G000069 vs. ExPASy TrEMBL
Match: A0A6J1EC24 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431193 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.4e-119
Identity = 226/264 (85.61%), Postives = 237/264 (89.77%), Query Frame = 0


Query: 1   MSSMALFSPSSHLSTLSPSSHHRTHFSFRPFSSLRTRNPSSSSLFTIRATADNGAGISGG 60
           MSSMALFSP S LS+LSPSSHHRTHF  RPFSSLR+RNPSS         ADNGAGISGG
Sbjct: 1   MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS------WVAADNGAGISGG 60

Query: 61  SAAVAVETPVEQKDPEPAKAVSEEQESLAGTNGSVAAAEEVEVVSKFEDPKWINGTWDLN 120
           S  VAVE+ V QKDPEP   V E+QE LA TNGSVAA EEV VVSKFEDPKW+NGTWDLN
Sbjct: 61  S--VAVESAVVQKDPEP---VVEKQEILAETNGSVAAVEEVVVVSKFEDPKWVNGTWDLN 120

Query: 121 QFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAEL 180
           QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+
Sbjct: 121 QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEI 180

Query: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLI 240
           LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLI
Sbjct: 181 LNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFIAVVGVLLIRKNEDIETLKKLI 240

Query: 241 DETTFYDKQWQATWQDENSGSGKM 265
           DETTFYDKQWQATWQDE  GSGK+
Sbjct: 241 DETTFYDKQWQATWQDETKGSGKV 253

The following BLAST results are available for this feature:

BLAST of Bhi11G000069 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17600.1	2.4e-78	59.85	Chlorophyll A-B binding family protein	[more]
AT5G47110.1	4.8e-74	57.20	Chlorophyll A-B binding family protein	[more]

BLAST of Bhi11G000069 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYX1	3.4e-77	59.85	Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis ...	[more]
Q6NKS4	6.7e-73	57.20	Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis ...	[more]

BLAST of Bhi11G000069 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906355.1	3.1e-144	100.00	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hisp...	[more]
XP_004147237.1	3.5e-135	95.13	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativu...	[more]
XP_008448777.1	5.5e-133	94.05	PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]	[more]
KAA0041046.1	1.6e-132	93.68	uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_022923520.1	1.7e-118	85.61	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita mosc...	[more]

BLAST of Bhi11G000069 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D8	1.7e-135	95.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017160 PE=4 SV=1	[more]
A0A1S3BLD8	2.7e-133	94.05	uncharacterized protein LOC103490842 OS=Cucumis melo OX=3656 GN=LOC103490842 PE=...	[more]
A0A5A7TG76	7.8e-133	93.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HQ78	8.4e-119	85.98	light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita ma...	[more]
A0A6J1EC24	8.4e-119	85.61	light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita mo...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..93
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 35..262
None	No IPR available	PANTHER	PTHR14154:SF87	LIGHT-HARVESTING COMPLEX-LIKE PROTEIN 3 ISOTYPE 1, CHLOROPLASTIC-RELATED	coord: 35..262
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 134..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000069	Bhi11M000069	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding