Bhi11G000059 (gene) Wax gourd (B227) v1

Overview
NameBhi11G000059
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 1692233 .. 1692736 (+)
RNA-Seq ExpressionBhi11G000059
SyntenyBhi11G000059
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCCTAGCAATCGCCGACCATCTCCTCTTCAGCCGGCATCGTCATCCGATCAAGCCGCCACCAGCTCATCGGTCGTTCGTTCGTGGGCCATCGTTCGCACAGGTCAGCTCGATCTCGTCAGCAAGTAGAGATCGTCCAAATCTCCTCCGTCGCGCCCCGATCTCGCCCAGCCGGTCAGATTTGTGTCCGAAACCATCGTCTGCCCAGCCACTCCTCCGCGCGCCACACGTCGTCGAGGATTTCGCCCAGCAACTCTCGCGGGTTCTTATACGTATCATTCGTGGGTTTCTTCCTCTCCGCCCCTTGCCAAAGTCGCCACGTTCGCCAGATCTAAAGCCATCTCCGTCGAAGCGTCGTCGCCTCAGTCATTCACACTCTGCTGATGGCAGACCCTGTCTGTTGCCGTCCAAGATCTCGGCCAGCGTCTTAGCTCCGCCACTGCCGTTGTCTTGCTCTCATCGGATTCTCAAGATTTGTGTAAGATTGGGTTCTTTTAGGTGA

mRNA sequence

ATGTGCCTAGCAATCGCCGACCATCTCCTCTTCAGCCGGCATCGTCATCCGATCAAGCCGCCACCAGCTCATCGGTCGTTCGTTCGTGGGCCATCGTTCGCACAGGTCAGCTCGATCTCGTCAGCAAGTAGAGATCGTCCAAATCTCCTCCGTCGCGCCCCGATCTCGCCCAGCCGGTCAGATTTGTGTCCGAAACCATCGTCTGCCCAGCCACTCCTCCGCGCGCCACACGTCGTCGAGGATTTCGCCCAGCAACTCTCGCGGGTTCTTATACGTATCATTCGTGGGTTTCTTCCTCTCCGCCCCTTGCCAAAGTCGCCACGTTCGCCAGATCTAAAGCCATCTCCGTCGAAGCGTCGTCGCCTCAGTCATTCACACTCTGCTGATGGCAGACCCTGTCTGTTGCCGTCCAAGATCTCGGCCAGCGTCTTAGCTCCGCCACTGCCGTTGTCTTGCTCTCATCGGATTCTCAAGATTTGTGTAAGATTGGGTTCTTTTAGGTGA

Coding sequence (CDS)

ATGTGCCTAGCAATCGCCGACCATCTCCTCTTCAGCCGGCATCGTCATCCGATCAAGCCGCCACCAGCTCATCGGTCGTTCGTTCGTGGGCCATCGTTCGCACAGGTCAGCTCGATCTCGTCAGCAAGTAGAGATCGTCCAAATCTCCTCCGTCGCGCCCCGATCTCGCCCAGCCGGTCAGATTTGTGTCCGAAACCATCGTCTGCCCAGCCACTCCTCCGCGCGCCACACGTCGTCGAGGATTTCGCCCAGCAACTCTCGCGGGTTCTTATACGTATCATTCGTGGGTTTCTTCCTCTCCGCCCCTTGCCAAAGTCGCCACGTTCGCCAGATCTAAAGCCATCTCCGTCGAAGCGTCGTCGCCTCAGTCATTCACACTCTGCTGATGGCAGACCCTGTCTGTTGCCGTCCAAGATCTCGGCCAGCGTCTTAGCTCCGCCACTGCCGTTGTCTTGCTCTCATCGGATTCTCAAGATTTGTGTAAGATTGGGTTCTTTTAGGTGA

Protein sequence

MCLAIADHLLFSRHRHPIKPPPAHRSFVRGPSFAQVSSISSASRDRPNLLRRAPISPSRSDLCPKPSSAQPLLRAPHVVEDFAQQLSRVLIRIIRGFLPLRPLPKSPRSPDLKPSPSKRRRLSHSHSADGRPCLLPSKISASVLAPPLPLSCSHRILKICVRLGSFR
Homology
[Close]
BLAST of Bhi11G000059 vs. NCBI nr
Match: XP_038906236.1 (uncharacterized protein LOC120092102 [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 8.5e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 1   MCLAIADHLLFSRHRHPIKPPPAHRSFVRGPSFAQVSSISSASRDRPNLLRRAPISPSRS 60
           MCLAIADHLLFSRHRHPIKPPPAHRSFVRGPSFAQVSSISSASRDRPNLLRRAPISPSRS
Sbjct: 1   MCLAIADHLLFSRHRHPIKPPPAHRSFVRGPSFAQVSSISSASRDRPNLLRRAPISPSRS 60

Query: 61  DLCPKPSSAQPLLRAPHVVEDFAQQLSRVLIRIIRGFLPLRPLPKSPRSPDLKPSPSKRR 120
           DLCPKPSSAQPLLRAPHVVEDFAQQLSRVLIRIIRGFLPLRPLPKSPRSPDLKPSPSKRR
Sbjct: 61  DLCPKPSSAQPLLRAPHVVEDFAQQLSRVLIRIIRGFLPLRPLPKSPRSPDLKPSPSKRR 120

Query: 121 RLSHSHSADGRPCLLPSKISASVLAPPLPLSCSHRILKICVRLGSFR 168
           RLSHSHSADGRPCLLPSKISASVLAPPLPLSCSHRILKICVRLGSFR
Sbjct: 121 RLSHSHSADGRPCLLPSKISASVLAPPLPLSCSHRILKICVRLGSFR 167

The following BLAST results are available for this feature:
BLAST of Bhi11G000059 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000059 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000059 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906236.18.5e-87100.00uncharacterized protein LOC120092102 [Benincasa hispida][more]
BLAST of Bhi11G000059 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000059Bhi11M000059mRNA