Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTAAATGTCAGCGAAACGGAATGTGGCCTTAAAATTAAAGGAGACAGCGAGGGAATGCCATTAGATTACCTTATAGGTTTTATACAACCATACAAGAATGAAAAGCTAAGTCTGGAGATCTTCGTATTCTGTATGTTTGGGACAGTTTTGTTTGCAAATCTTCGAGGGTATGTGGTTGTGAAAATGGCCAAATTCTTTCCACCAATTCAGCATGGGGCTAACTCCATTTCACCCATCTTGGCAGAAACAATCATGTCTTTAAAATTTTGTATGACACAAATGAAAGGAAAGTTCTTTGGTTGTACGCCATTGTTATATGTTCAGTTGTTAAGTCATCTAACGTGTCTGGCTGACTTCGGATACCCAGAGGTAAAATTCTCAAGTCCATGGTTTACAACTAGGAATCTGACTTCAAAGTTTAGGGTCATCAAGCGCAAAGTTGATGCATCAAATAAAGAATCATGGGTGTCTTTCCTGAAAAGTTTGAAAAATGAAGACATAATATGGAGGGCCCCTTGGATGCCATCAAAGCCAATGGTCCACAGGTGTGGCAAATTTCATAATGTCCAACTTTTGGGCCCTTGGGGAGGTACTAACTATGCACAAATTGATCAACTGAAAAATAATGTCAACAATTTACAACAACTAGTTTTGGATTTGAACAAGACACTTGATGCACTTACTAAACAAGTTGTCGAATAA
mRNA sequence
ATGGGCCTAAATGTCAGCGAAACGGAATGTGGCCTTAAAATTAAAGGAGACAGCGAGGGAATGCCATTAGATTACCTTATAGGTTTTATACAACCATACAAGAATGAAAAGCTAAGTCTGGAGATCTTCGTATTCTGTATGTTTGGGACAGTTTTGTTTGCAAATCTTCGAGGGTATGTGGTTGTGAAAATGGCCAAATTCTTTCCACCAATTCAGCATGGGGCTAACTCCATTTCACCCATCTTGGCAGAAACAATCATGTCTTTAAAATTTTGTATGACACAAATGAAAGGAAAGTTCTTTGGTTGTACGCCATTGTTATATGTTCAGTTGTTAAGTCATCTAACGTGTCTGGCTGACTTCGGATACCCAGAGGTAAAATTCTCAAGTCCATGGTTTACAACTAGGAATCTGACTTCAAAGTTTAGGGTCATCAAGCGCAAAGTTGATGCATCAAATAAAGAATCATGGGTGTCTTTCCTGAAAAGTTTGAAAAATGAAGACATAATATGGAGGGCCCCTTGGATGCCATCAAAGCCAATGGTCCACAGGTGTGGCAAATTTCATAATGTCCAACTTTTGGGCCCTTGGGGAGGTACTAACTATGCACAAATTGATCAACTGAAAAATAATGTCAACAATTTACAACAACTAGTTTTGGATTTGAACAAGACACTTGATGCACTTACTAAACAAGTTGTCGAATAA
Coding sequence (CDS)
ATGGGCCTAAATGTCAGCGAAACGGAATGTGGCCTTAAAATTAAAGGAGACAGCGAGGGAATGCCATTAGATTACCTTATAGGTTTTATACAACCATACAAGAATGAAAAGCTAAGTCTGGAGATCTTCGTATTCTGTATGTTTGGGACAGTTTTGTTTGCAAATCTTCGAGGGTATGTGGTTGTGAAAATGGCCAAATTCTTTCCACCAATTCAGCATGGGGCTAACTCCATTTCACCCATCTTGGCAGAAACAATCATGTCTTTAAAATTTTGTATGACACAAATGAAAGGAAAGTTCTTTGGTTGTACGCCATTGTTATATGTTCAGTTGTTAAGTCATCTAACGTGTCTGGCTGACTTCGGATACCCAGAGGTAAAATTCTCAAGTCCATGGTTTACAACTAGGAATCTGACTTCAAAGTTTAGGGTCATCAAGCGCAAAGTTGATGCATCAAATAAAGAATCATGGGTGTCTTTCCTGAAAAGTTTGAAAAATGAAGACATAATATGGAGGGCCCCTTGGATGCCATCAAAGCCAATGGTCCACAGGTGTGGCAAATTTCATAATGTCCAACTTTTGGGCCCTTGGGGAGGTACTAACTATGCACAAATTGATCAACTGAAAAATAATGTCAACAATTTACAACAACTAGTTTTGGATTTGAACAAGACACTTGATGCACTTACTAAACAAGTTGTCGAATAA
Protein sequence
MGLNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVVKMAKFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFGYPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMVHRCGKFHNVQLLGPWGGTNYAQIDQLKNNVNNLQQLVLDLNKTLDALTKQVVE
Homology
BLAST of Bhi10G001322 vs. NCBI nr
Match:
KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 188.7 bits (478), Expect = 5.6e-44
Identity = 86/203 (42.36%), Postives = 122/203 (60.10%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ +E + +K+KG E +P DYLI Q Y +E L + C++G V+F GYV
Sbjct: 125 VHATEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDR 184
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFG 122
K+ K F ++ G N I PILAET SL +C + +GK C PLLY+ + SH+ A+F
Sbjct: 185 KVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFR 244
Query: 123 YPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMV 182
P + FSSPW RN S+F + KE+W+SF L +E++IW+A WMP K ++
Sbjct: 245 CPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVI 304
Query: 183 HRCGKFHNVQLLGPWGGTNYAQI 206
+RCG FH+V LLGPWGG NY +
Sbjct: 305 YRCGDFHSVPLLGPWGGVNYTPL 327
BLAST of Bhi10G001322 vs. NCBI nr
Match:
KAA0056623.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 184.9 bits (468), Expect = 8.1e-43
Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0
Query: 6 SETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVVKMA 65
+E + +K+KG E +P DYLI Q Y +E L + C++G V+F GYV K+
Sbjct: 149 TEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDGKVI 208
Query: 66 KFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFGYPE 125
K F ++ G N I PILA+T SL +C + +GKF C PLLY+ + SH+ A+F P
Sbjct: 209 KLFFEMERGVNPIIPILAKTFRSLNYCRNKGEGKFNCCVPLLYIWIQSHIKFSAEFRCPR 268
Query: 126 VKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMVHRC 185
+ FSSPW RN S+F + KE+W+SF L +E++IW+A WMP K ++RC
Sbjct: 269 LDFSSPWNLMRNTISEFCMTVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAAIYRC 328
Query: 186 GKFHNVQLLGPWGGTNYAQI 206
FH+V LLGPWGG NY +
Sbjct: 329 EDFHSVPLLGPWGGVNYTPL 348
BLAST of Bhi10G001322 vs. NCBI nr
Match:
KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 181.8 bits (460), Expect = 6.8e-42
Identity = 86/211 (40.76%), Postives = 122/211 (57.82%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ +E + +K KG E +P DYLI Q Y +E L + C++G V+F GYV
Sbjct: 96 VHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDR 155
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQ--------MKGKFFGCTPLLYVQLLSH 122
K+ K F ++ G N I PILAET SL +C + ++GK C PLLY+ + SH
Sbjct: 156 KVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSH 215
Query: 123 LTCLADFGYPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAP 182
+ A+F P + FSSPW RN S+F + KE+W+SF L +E++IW+A
Sbjct: 216 IKFPAEFRCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQ 275
Query: 183 WMPSKPMVHRCGKFHNVQLLGPWGGTNYAQI 206
WMP K +++RCG FH+V LLGPWGG NY +
Sbjct: 276 WMPLKAVIYRCGDFHSVPLLGPWGGVNYTPL 306
BLAST of Bhi10G001322 vs. NCBI nr
Match:
KAA0036949.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 180.3 bits (456), Expect = 2.0e-41
Identity = 86/207 (41.55%), Postives = 120/207 (57.97%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ +E + +K KG E +P DYLI Q Y +E L + C++G V+F GYV
Sbjct: 96 VHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDR 155
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQ--------MKGKFFGCTPLLYVQLLSH 122
K+ K F ++ G N I PILAET SL +C + ++GK C PLLY+ + SH
Sbjct: 156 KVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSH 215
Query: 123 LTCLADFGYPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAP 182
+ A+F P + FSSPW RN S+F + KE+W+SF L +E++IW+A
Sbjct: 216 IKFPAEFRCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQ 275
Query: 183 WMPSKPMVHRCGKFHNVQLLGPWGGTN 202
WMP K +++RCG FHNV LLGPWGG N
Sbjct: 276 WMPLKAVIYRCGDFHNVPLLGPWGGVN 302
BLAST of Bhi10G001322 vs. NCBI nr
Match:
XP_022147190.1 (uncharacterized protein LOC111016201 [Momordica charantia])
HSP 1 Score: 179.1 bits (453), Expect = 4.4e-41
Identity = 82/207 (39.61%), Postives = 120/207 (57.97%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ E E +K KG++ +P++Y+ + NE+ L + C+F VLF + YV
Sbjct: 152 ISAXEIEKHVKRKGENTCLPIEYIXSLQXRFVNEERELSLLALCLFNLVLFPXVSXYVEE 211
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFG 122
+ K F ++ G N + PILAET +L FC ++ GKF GC LLY+ +LSH+ C +F
Sbjct: 212 XVVKLFVKVEMGVNLVIPILAETFRALNFCRSRGVGKFIGCAQLLYIWILSHINCPPEFK 271
Query: 123 YPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMV 182
P+VKFS W +NL +F KE W F L+ ED+ WRA WM +KPM+
Sbjct: 272 CPQVKFSRSWSRLQNLMLEFNQADWSQIHPGKEEWSIFFAGLRPEDVEWRARWMSTKPMM 331
Query: 183 HRCGKFHNVQLLGPWGGTNYAQIDQLK 210
+RCGKFH++ LLGPWG +YA + L+
Sbjct: 332 YRCGKFHSLSLLGPWGCVSYAPLMVLR 358
BLAST of Bhi10G001322 vs. ExPASy TrEMBL
Match:
A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 2.7e-44
Identity = 86/203 (42.36%), Postives = 122/203 (60.10%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ +E + +K+KG E +P DYLI Q Y +E L + C++G V+F GYV
Sbjct: 125 VHATEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDR 184
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFG 122
K+ K F ++ G N I PILAET SL +C + +GK C PLLY+ + SH+ A+F
Sbjct: 185 KVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFR 244
Query: 123 YPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMV 182
P + FSSPW RN S+F + KE+W+SF L +E++IW+A WMP K ++
Sbjct: 245 CPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVI 304
Query: 183 HRCGKFHNVQLLGPWGGTNYAQI 206
+RCG FH+V LLGPWGG NY +
Sbjct: 305 YRCGDFHSVPLLGPWGGVNYTPL 327
BLAST of Bhi10G001322 vs. ExPASy TrEMBL
Match:
A0A5A7UL51 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0
Query: 6 SETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVVKMA 65
+E + +K+KG E +P DYLI Q Y +E L + C++G V+F GYV K+
Sbjct: 149 TEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDGKVI 208
Query: 66 KFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFGYPE 125
K F ++ G N I PILA+T SL +C + +GKF C PLLY+ + SH+ A+F P
Sbjct: 209 KLFFEMERGVNPIIPILAKTFRSLNYCRNKGEGKFNCCVPLLYIWIQSHIKFSAEFRCPR 268
Query: 126 VKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMVHRC 185
+ FSSPW RN S+F + KE+W+SF L +E++IW+A WMP K ++RC
Sbjct: 269 LDFSSPWNLMRNTISEFCMTVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAAIYRC 328
Query: 186 GKFHNVQLLGPWGGTNYAQI 206
FH+V LLGPWGG NY +
Sbjct: 329 EDFHSVPLLGPWGGVNYTPL 348
BLAST of Bhi10G001322 vs. ExPASy TrEMBL
Match:
A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42
Identity = 86/211 (40.76%), Postives = 122/211 (57.82%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ +E + +K KG E +P DYLI Q Y +E L + C++G V+F GYV
Sbjct: 96 VHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDR 155
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQ--------MKGKFFGCTPLLYVQLLSH 122
K+ K F ++ G N I PILAET SL +C + ++GK C PLLY+ + SH
Sbjct: 156 KVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSH 215
Query: 123 LTCLADFGYPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAP 182
+ A+F P + FSSPW RN S+F + KE+W+SF L +E++IW+A
Sbjct: 216 IKFPAEFRCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQ 275
Query: 183 WMPSKPMVHRCGKFHNVQLLGPWGGTNYAQI 206
WMP K +++RCG FH+V LLGPWGG NY +
Sbjct: 276 WMPLKAVIYRCGDFHSVPLLGPWGGVNYTPL 306
BLAST of Bhi10G001322 vs. ExPASy TrEMBL
Match:
A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1)
HSP 1 Score: 180.3 bits (456), Expect = 9.6e-42
Identity = 86/207 (41.55%), Postives = 120/207 (57.97%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ +E + +K KG E +P DYLI Q Y +E L + C++G V+F GYV
Sbjct: 96 VHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDR 155
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQ--------MKGKFFGCTPLLYVQLLSH 122
K+ K F ++ G N I PILAET SL +C + ++GK C PLLY+ + SH
Sbjct: 156 KVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSH 215
Query: 123 LTCLADFGYPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAP 182
+ A+F P + FSSPW RN S+F + KE+W+SF L +E++IW+A
Sbjct: 216 IKFPAEFRCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQ 275
Query: 183 WMPSKPMVHRCGKFHNVQLLGPWGGTN 202
WMP K +++RCG FHNV LLGPWGG N
Sbjct: 276 WMPLKAVIYRCGDFHNVPLLGPWGGVN 302
BLAST of Bhi10G001322 vs. ExPASy TrEMBL
Match:
A0A6J1CZG4 (uncharacterized protein LOC111016201 OS=Momordica charantia OX=3673 GN=LOC111016201 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 2.1e-41
Identity = 82/207 (39.61%), Postives = 120/207 (57.97%), Query Frame = 0
Query: 3 LNVSETECGLKIKGDSEGMPLDYLIGFIQPYKNEKLSLEIFVFCMFGTVLFANLRGYVVV 62
++ E E +K KG++ +P++Y+ + NE+ L + C+F VLF + YV
Sbjct: 152 ISAXEIEKHVKRKGENTCLPIEYIXSLQXRFVNEERELSLLALCLFNLVLFPXVSXYVEE 211
Query: 63 KMAKFFPPIQHGANSISPILAETIMSLKFCMTQMKGKFFGCTPLLYVQLLSHLTCLADFG 122
+ K F ++ G N + PILAET +L FC ++ GKF GC LLY+ +LSH+ C +F
Sbjct: 212 XVVKLFVKVEMGVNLVIPILAETFRALNFCRSRGVGKFIGCAQLLYIWILSHINCPPEFK 271
Query: 123 YPEVKFSSPWFTTRNLTSKFRVIKRKVDASNKESWVSFLKSLKNEDIIWRAPWMPSKPMV 182
P+VKFS W +NL +F KE W F L+ ED+ WRA WM +KPM+
Sbjct: 272 CPQVKFSRSWSRLQNLMLEFNQADWSQIHPGKEEWSIFFAGLRPEDVEWRARWMSTKPMM 331
Query: 183 HRCGKFHNVQLLGPWGGTNYAQIDQLK 210
+RCGKFH++ LLGPWG +YA + L+
Sbjct: 332 YRCGKFHSLSLLGPWGCVSYAPLMVLR 358
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T5S7 | 2.7e-44 | 42.36 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=... | [more] |
A0A5A7UL51 | 3.9e-43 | 42.50 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 P... | [more] |
A0A5A7T1W2 | 3.3e-42 | 40.76 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7T6E2 | 9.6e-42 | 41.55 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=... | [more] |
A0A6J1CZG4 | 2.1e-41 | 39.61 | uncharacterized protein LOC111016201 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |