Bhi10G000989 (gene) Wax gourd (B227) v1

Overview
NameBhi10G000989
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionMitochondrial transcription termination factor family protein
Locationchr10: 29760934 .. 29761254 (+)
RNA-Seq ExpressionBhi10G000989
SyntenyBhi10G000989
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTGATCAATCCCAGGCTTATTAGCTACAGTATTGTCCCAAGGCTTACTGTGATTCTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTATGGGGTATAGTGTCGATGAAAGGCTACATCCTACATTAGAGTTTCTGAAATCTATAGGTTTGAAGGACGTAGATCTTCAAGCAGTTGCAGTTGGCTACCCTGAGGTTTTACGTAGGGATGCTGACAAAGTTTTGAGACTTTGTTTTGATTTCCTGAAGAACTGTGGTTTTCGAGATCCCAGGTAG

mRNA sequence

ATGATTTTGATCAATCCCAGGCTTATTAGCTACAGTATTGTCCCAAGGCTTACTGTGATTCTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTATGGGGTATAGTGTCGATGAAAGGCTACATCCTACATTAGAGTTTCTGAAATCTATAGGTTTGAAGGACGTAGATCTTCAAGCAGTTGCAGTTGGCTACCCTGAGGTTTTACGTAGGGATGCTGACAAAGTTTTGAGACTTTGTTTTGATTTCCTGAAGAACTGTGGTTTTCGAGATCCCAGGTAG

Coding sequence (CDS)

ATGATTTTGATCAATCCCAGGCTTATTAGCTACAGTATTGTCCCAAGGCTTACTGTGATTCTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTATGGGGTATAGTGTCGATGAAAGGCTACATCCTACATTAGAGTTTCTGAAATCTATAGGTTTGAAGGACGTAGATCTTCAAGCAGTTGCAGTTGGCTACCCTGAGGTTTTACGTAGGGATGCTGACAAAGTTTTGAGACTTTGTTTTGATTTCCTGAAGAACTGTGGTTTTCGAGATCCCAGGTAG

Protein sequence

MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEFLKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRDPR
Homology
[Close]
BLAST of Bhi10G000989 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL NPRLISYSI  +LTVI+ FLAS GLD++GMIGKVLVK PFLMGYSVD+RL PT EF
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193

Query: 61  LK-SIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LK S+GL +  +++V + +P++L RD +K+L+  +D+LK CGF D
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGD 238

[Close]
BLAST of Bhi10G000989 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL NPRLISYSI  +LTVI+ FLAS GLD++GMIGKVLVK PFLMGYSVD+RL PT EF
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193

Query: 61  LK-SIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LK S+GL +  +++V + +P++L RD +K+L+  +D+LK CGF D
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGD 238

[Close]
BLAST of Bhi10G000989 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL NPRLISYSI  +LTVI+ FLAS GLD++GMIGKVLVK PFLMGYSVD+RL PT EF
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193

Query: 61  LK-SIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LK S+GL +  +++V + +P++L RD +K+L+  +D+LK CGF D
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGD 238

[Close]
BLAST of Bhi10G000989 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 54.3 bits (129), Expect = 6.9e-08
Identity = 30/97 (30.93%), Postives = 56/97 (57.73%), Query Frame = 0 

Query: 6   PRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEFLKSIG 65
           P +++YS   +LT  ++FL+  GL +E  IG++L + P +M YSV+++L PT+E+ +S+ 
Sbjct: 293 PAILTYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYFRSL- 352

Query: 66  LKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGF 103
             +VD+  +    P+      +  L+   +F    GF
Sbjct: 353 --NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF 384

[Close]
BLAST of Bhi10G000989 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 26/96 (27.08%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 6   PRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEFLKSIG 65
           P+++  S+V  L  ++ FL    ++K+  +G VL+KYP L+G+ ++  +  ++ +L SIG
Sbjct: 169 PQVLHASVVVELAPVVKFLRGLDVEKQD-LGYVLMKYPELLGFKLEGTMSTSVAYLVSIG 228

Query: 66  LKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCG 102
           +   D+  +   YP +L      +++   D+L + G
Sbjct: 229 VSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIG 263

[Close]
BLAST of Bhi10G000989 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.7e-31
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL NPRLISYSI  +LTVI+ FLAS GLD++GMIGKVLVK PFLMGYSVD+RL PT EF
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193

Query: 61  LK-SIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LK S+GL +  +++V + +P++L RD +K+L+  +D+LK CGF D
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGD 238

[Close]
BLAST of Bhi10G000989 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.7e-07
Identity = 30/97 (30.93%), Postives = 56/97 (57.73%), Query Frame = 0 

Query: 6   PRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEFLKSIG 65
           P +++YS   +LT  ++FL+  GL +E  IG++L + P +M YSV+++L PT+E+ +S+ 
Sbjct: 293 PAILTYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYFRSL- 352

Query: 66  LKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGF 103
             +VD+  +    P+      +  L+   +F    GF
Sbjct: 353 --NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF 384

[Close]
BLAST of Bhi10G000989 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-05
Identity = 31/106 (29.25%), Postives = 55/106 (51.89%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           +I   P +++  +  +L   +DF+ +   + +   G VL + P ++ YSV E ++  +EF
Sbjct: 234 IIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSV-EHMNGQVEF 293

Query: 61  LKSI-GLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRDP 106
           LKS  GL    +  +   +P V+    ++ LR   +FLK CGF  P
Sbjct: 294 LKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSP 338

[Close]
BLAST of Bhi10G000989 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.7e-04
Identity = 26/101 (25.74%), Postives = 51/101 (50.50%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           M+   P++I +     +   +++L  FGL  E  +G++L   P LMG S++ER  P +++
Sbjct: 336 MVYDYPKIIGFFSFQVMEKKINYLKEFGLSTE-EVGRLLAYKPHLMGCSIEERWKPLVKY 395

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCG 102
              +G+    ++ + V  P +   D +K +     FL+  G
Sbjct: 396 FYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMG 435

[Close]
BLAST of Bhi10G000989 vs. NCBI nr
Match: XP_031744171.1 (LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 1.8e-37
Identity = 82/104 (78.85%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLI YSIVP+LT I+DF A+FGLDK+G+I KVLVKYPFLMGYSVD+ L PTL+F
Sbjct: 300 MILLNPRLIRYSIVPKLTEIVDFHANFGLDKQGLIDKVLVKYPFLMGYSVDKTLRPTLKF 359

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
            KSIGLKDVDLQA+A GYPEVL RDA+KVL   FDFLKNCGFRD
Sbjct: 360 FKSIGLKDVDLQAIAGGYPEVLCRDANKVLTPNFDFLKNCGFRD 403

[Close]
BLAST of Bhi10G000989 vs. NCBI nr
Match: KAE8646817.1 (hypothetical protein Csa_005087 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 1.8e-37
Identity = 82/104 (78.85%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLI YSIVP+LT I+DF A+FGLDK+G+I KVLVKYPFLMGYSVD+ L PTL+F
Sbjct: 67  MILLNPRLIRYSIVPKLTEIVDFHANFGLDKQGLIDKVLVKYPFLMGYSVDKTLRPTLKF 126

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
            KSIGLKDVDLQA+A GYPEVL RDA+KVL   FDFLKNCGFRD
Sbjct: 127 FKSIGLKDVDLQAIAGGYPEVLCRDANKVLTPNFDFLKNCGFRD 170

[Close]
BLAST of Bhi10G000989 vs. NCBI nr
Match: XP_008448401.1 (PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 6.7e-37
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLISY+IVP+LT I+DF ASFGLDK+G+IGKVLVKYP+L GY+ D+ L PTLEF
Sbjct: 1   MILLNPRLISYNIVPKLTEIVDFRASFGLDKQGLIGKVLVKYPYLTGYNFDKMLRPTLEF 60

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LKSIGL D+ LQA+AVGY EVL RDA+KVLRL FDFLKNCGF D
Sbjct: 61  LKSIGLTDIGLQAIAVGYSEVLCRDANKVLRLNFDFLKNCGFLD 104

[Close]
BLAST of Bhi10G000989 vs. NCBI nr
Match: TYK01057.1 (transcription termination factor MTERF6 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 6.7e-37
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLISY+IVP+LT I+DF ASFGLDK+G+IGKVLVKYP+L GY+ D+ L PTLEF
Sbjct: 28  MILLNPRLISYNIVPKLTEIVDFRASFGLDKQGLIGKVLVKYPYLTGYNFDKMLRPTLEF 87

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LKSIGL D+ LQA+AVGY EVL RDA+KVLRL FDFLKNCGF D
Sbjct: 88  LKSIGLTDIGLQAIAVGYSEVLCRDANKVLRLNFDFLKNCGFLD 131

[Close]
BLAST of Bhi10G000989 vs. NCBI nr
Match: KAA0047800.1 (transcription termination factor MTERF6 [Cucumis melo var. makuwa])

HSP 1 Score: 161.0 bits (406), Expect = 5.6e-36
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLI Y+IVP+LT I+DF A FGLDK+G+IGKVLVKYP+LMGY+ D+ L PTLEF
Sbjct: 28  MILLNPRLIRYNIVPKLTEIVDFRAGFGLDKQGLIGKVLVKYPYLMGYNFDKMLRPTLEF 87

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGF 103
           LKSIGL D+ LQA+AVGY EVL RDA+KVLRL FDFLKNCGF
Sbjct: 88  LKSIGLTDIGLQAIAVGYYEVLCRDANKVLRLNFDFLKNCGF 129

[Close]
BLAST of Bhi10G000989 vs. ExPASy TrEMBL
Match: A0A0A0KE07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117190 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.5e-38
Identity = 82/104 (78.85%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLI YSIVP+LT I+DF A+FGLDK+G+I KVLVKYPFLMGYSVD+ L PTL+F
Sbjct: 54  MILLNPRLIRYSIVPKLTEIVDFHANFGLDKQGLIDKVLVKYPFLMGYSVDKTLRPTLKF 113

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
            KSIGLKDVDLQA+A GYPEVL RDA+KVL   FDFLKNCGFRD
Sbjct: 114 FKSIGLKDVDLQAIAGGYPEVLCRDANKVLTPNFDFLKNCGFRD 157

[Close]
BLAST of Bhi10G000989 vs. ExPASy TrEMBL
Match: A0A5D3BP20 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00710 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.2e-37
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLISY+IVP+LT I+DF ASFGLDK+G+IGKVLVKYP+L GY+ D+ L PTLEF
Sbjct: 28  MILLNPRLISYNIVPKLTEIVDFRASFGLDKQGLIGKVLVKYPYLTGYNFDKMLRPTLEF 87

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LKSIGL D+ LQA+AVGY EVL RDA+KVLRL FDFLKNCGF D
Sbjct: 88  LKSIGLTDIGLQAIAVGYSEVLCRDANKVLRLNFDFLKNCGFLD 131

[Close]
BLAST of Bhi10G000989 vs. ExPASy TrEMBL
Match: A0A1S3BK85 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103490602 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.2e-37
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLISY+IVP+LT I+DF ASFGLDK+G+IGKVLVKYP+L GY+ D+ L PTLEF
Sbjct: 1   MILLNPRLISYNIVPKLTEIVDFRASFGLDKQGLIGKVLVKYPYLTGYNFDKMLRPTLEF 60

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LKSIGL D+ LQA+AVGY EVL RDA+KVLRL FDFLKNCGF D
Sbjct: 61  LKSIGLTDIGLQAIAVGYSEVLCRDANKVLRLNFDFLKNCGFLD 104

[Close]
BLAST of Bhi10G000989 vs. ExPASy TrEMBL
Match: A0A5A7TX97 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00440 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.7e-36
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           MIL+NPRLI Y+IVP+LT I+DF A FGLDK+G+IGKVLVKYP+LMGY+ D+ L PTLEF
Sbjct: 28  MILLNPRLIRYNIVPKLTEIVDFRAGFGLDKQGLIGKVLVKYPYLMGYNFDKMLRPTLEF 87

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGF 103
           LKSIGL D+ LQA+AVGY EVL RDA+KVLRL FDFLKNCGF
Sbjct: 88  LKSIGLTDIGLQAIAVGYYEVLCRDANKVLRLNFDFLKNCGF 129

[Close]
BLAST of Bhi10G000989 vs. ExPASy TrEMBL
Match: A0A5B6Z9F0 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009937 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 0 

Query: 1   MILINPRLISYSIVPRLTVILDFLASFGLDKEGMIGKVLVKYPFLMGYSVDERLHPTLEF 60
           M+L+NPR+ISYSI  +L+ I+DFLAS GL KEGMIGKVLVKYPF+MGYSVD+RL PTLEF
Sbjct: 135 MLLLNPRIISYSIESKLSKIVDFLASLGLTKEGMIGKVLVKYPFIMGYSVDKRLCPTLEF 194

Query: 61  LKSIGLKDVDLQAVAVGYPEVLRRDADKVLRLCFDFLKNCGFRD 105
           LKS+GL ++DLQ VA+ +PEVL RDA+K+LR  F +LK  GF+D
Sbjct: 195 LKSVGLTELDLQRVAISFPEVLCRDANKILRHNFTYLKGHGFKD 238

The following BLAST results are available for this feature:
BLAST of Bhi10G000989 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38160.16.9e-3262.86Mitochondrial transcription termination factor family protein [more]
AT4G38160.26.9e-3262.86Mitochondrial transcription termination factor family protein [more]
AT4G38160.36.9e-3262.86Mitochondrial transcription termination factor family protein [more]
AT4G14605.16.9e-0830.93Mitochondrial transcription termination factor family protein [more]
AT2G44020.11.2e-0727.08Mitochondrial transcription termination factor family protein [more]
BLAST of Bhi10G000989 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL69.7e-3162.86Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
F4JVI39.7e-0730.93Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9FK231.1e-0529.25Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL37.7e-0425.74Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Bhi10G000989 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744171.11.8e-3778.85LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mito... [more]
KAE8646817.11.8e-3778.85hypothetical protein Csa_005087 [Cucumis sativus][more]
XP_008448401.16.7e-3776.92PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial-... [more]
TYK01057.16.7e-3776.92transcription termination factor MTERF6 [Cucumis melo var. makuwa][more]
KAA0047800.15.6e-3676.47transcription termination factor MTERF6 [Cucumis melo var. makuwa][more]
BLAST of Bhi10G000989 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE078.5e-3878.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117190 PE=3 SV=1[more]
A0A5D3BP203.2e-3776.92Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BK853.2e-3776.92transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cuc... [more]
A0A5A7TX972.7e-3676.47Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5B6Z9F01.8e-3269.23Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009937 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 1..30
e-value: 500.0
score: 6.2
coord: 72..103
e-value: 1.2
score: 18.1
coord: 36..67
e-value: 7.1E-7
score: 38.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 19..103
e-value: 2.2E-11
score: 43.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..104
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 1..106
e-value: 1.0E-17
score: 66.1
NoneNo IPR availablePANTHERPTHR13068:SF5TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIALcoord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000989Bhi10M000989mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0032502 developmental process
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0003690 double-stranded DNA binding