Bhi10G000661 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000661
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	SWR1 complex subunit 6
Location	chr10: 17237452 .. 17240308 (+)
RNA-Seq Expression	Bhi10G000661
Synteny	Bhi10G000661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGATTAGATGTATCAATAATCACTTTATGCCTCTCAACTCCACGGTGGACTTGGTACTCCGACCGCCGTCTGTGTAAATATCCTGTTCAAATAAACGACGGTCGCCGGAGTTGGGAACAGTGAACATTCAACGAAAGTCCGTCGACTTGCATTCCGCCCTTCTTCTTCTTCTCCGATTCGTAGGGTTTGGAACTCTCTCTCTCTTGCTCACTTCAGTTTCGTTCTCACACTTTAACATTACAATCGAATAGATACCGTCTTTCGAACAGTGTTCAAAATCAATTTCGGAGGGCTCGAACAAATTATTATGCAAAACCTAGGGTTTTTCTCTTACTACAAATCTTCTAACGCGATTTTGTATTTTATAATTTCTGATGAGAATTCTCTACCTGTTTCAGTTCATCGCGCTAATTTCAGTCGCTTCGTTTTCTCATTCACGGATCTGAGTGTACGGTTTGTAGCTAGCGATGGATGATGATGCTACGAATCCATTCCGACGCATGTCGAGCCGCAATCGTAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCGAGCAGCGACAACCGTACTCAGGTTTGTTTGGTGAACTAGATTTTGCTTCTTTGTTGTGAGTTATTGATGCGATATAATTGATTAGTTGAAACCTGGACTCTATATCTACAGTGTACATGTTATTTTTGGTTTCTCTGCTCTTCCAGGCAGCTCTTGCTCGTCTCGAGGCACTGGAAAATGATAATGCCGGAGTGGAAGCAGTCGAAAACATTGACGATGAGGATGCTTCTCTCGATGATGATGAGCAAGGTTAATATGATGTTATTCATTCATCTATTTTCCGCCTTGGCTTTTTTCTTGAAGGGCGTTCTCTTCAATTATGCATCTATCAAATGTTAGACATCTAATATTTTCTCATTCCTTTCCGTTGTACTGCTTATTTCCATATTCTATTTCGTAGTAGGCATTGCCTTTGTTACGTCGAGTCTTATTATTTGTTAATCCAGAACCAGATATTTCTCAAGTTTTAGACTTTGGTGTATGCTCGAGAAAATGTTCATTTTCTCCATCCTTAGAATTGCTGTACTTCTGTTATGGTTTGGAAGATGGCCAGCAACAAAACTCAGATATTGCTTTGGCCATGGAGTTTTAGTACTCAGTTAATTGTCCAAATTTTTGCAATGGTACTTGGATTACTACTCGGCCACTGAGGATGAGATATTTCAGGTTCATTTATGTGGGTTTTTCTAGGGATTTTACAATTCCTGAGTGTTGGTGTGATAATGAGAGCATTTAACAATGCAGCTCTCAGAATTGGAATTTGGTGATTGGGTTGAGCTTACTTGCTACAAATTCTTGCCCACCTACTTGGCAAGAAGATAGGTGGAGAAGTAATTTAGAAGACTCTGGTGATATGATTCTCTTAATTCTTGGACAAGTTCAGATGATATCCGGTTTTCTTATTAGTCCTGAACTGGTGGCTTTTGTGTACAAGTGGTGCTGAAGAAATCAAGATCATGTTTTTCCAAGGGGCGGGTAGGTTATAAATGTGGAATAAGAGTGTGGTTTGGGTTGTCTTTCTCAAAACTCCCAAGGACAGCATCACCAAGCCAGCTGTTGTTTAGTCATCCTTTTTGGTGAAGAGCCAAGTTGGTGTTGGCTAATTGCCGTAAAGGCTATCCCATGGGGGTTTTGGGAAGGTTTAAACTATAGAATTTTTTGAGAGAAGTGTCACAATTTTGAGGAGATGTGATTTTTCATCATTTTCTTGGTATCATCTTGGTGAACTTATTTCAGATTATTTGAATCTATTCTCTCTTTCTTTTCCTTTTTTTATTTTTCGAATTGCTGTAGTTCTTTTGTAGGCTCTATAGGCTTCAAAGTCAGTTGATATATCATCTCTTTCGTCCCTCCTTTCGTACTCGTGTGTTTCATTGTGTTTAGTTCCGTATAGAGAAATCACTTGAAAATGAAATTCATCTCCATGGAATAATAGAACCTGTCAACTTAAATTCTATTTTCTTGCGTCCATAATGTATTTGCATTGATTAGAACAGATCGAATTATATTTTTCTATACCTTCGTGTGTTGTTTGGAATTTAGTGTCACTAATCTTTACCCCTTTTTAACCCCAATACAGCATACATACAGAAGCGGCAATCAAAGGGCACTAAGCGCAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAGGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGTTTGGATCAAACATTTTCTGCTTTGTGGCCTTATTAGATTACAATAAAAAAAAGTTTATTTTGATGTTGAGCTACATATACACTATTATTCTTCTTTCAAAAAACAGGCAAATTTGGAGTCTTTGCCTCCACATGTTCCATCATACTTAAAGGCAGCCGTCGGACCTCCAAGCTCGACCTCCCGCCGGCATTTCTGCACGGTTTGTGGTTTTGCTGCTAGCTACACGTGCATAAGGTGTGGAATCCGCTTTTGTTCCTGTCGTTGCCAGAATATACATAATGATACTCGTTGTTTGAAATTTGTTGCCTGATAGTGATAGGTGGGAGGCTTGTAGATTGTAGTGAACTCGCTACTCAATTCTCTGTAAATTACAATGTAGCTATAATACTTTTTTTTGTGATACACATTCAGCTTGTTCTATCAATTAAGAGCTTGTTTGGAATGACTTTCAGATGCAATCCCGTGAATGCCATGAGACAAGCTATCTCATGA

mRNA sequence

CAACGATTAGATGTATCAATAATCACTTTATGCCTCTCAACTCCACGGTGGACTTGGTACTCCGACCGCCGTCTGTGTAAATATCCTGTTCAAATAAACGACGGTCGCCGGAGTTGGGAACAGTGAACATTCAACGAAAGTCCGTCGACTTGCATTCCGCCCTTCTTCTTCTTCTCCGATTCGTAGGTTCATCGCGCTAATTTCAGTCGCTTCGTTTTCTCATTCACGGATCTGAGTGTACGGTTTGTAGCTAGCGATGGATGATGATGCTACGAATCCATTCCGACGCATGTCGAGCCGCAATCGTAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCGAGCAGCGACAACCGTACTCAGGCAGCTCTTGCTCGTCTCGAGGCACTGGAAAATGATAATGCCGGAGTGGAAGCAGTCGAAAACATTGACGATGAGGATGCTTCTCTCGATGATGATGAGCAAGCATACATACAGAAGCGGCAATCAAAGGGCACTAAGCGCAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAGGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGCAAATTTGGAGTCTTTGCCTCCACATGTTCCATCATACTTAAAGGCAGCCGTCGGACCTCCAAGCTCGACCTCCCGCCGGCATTTCTGCACGGTTTGTGGTTTTGCTGCTAGCTACACGTGCATAAGATGCAATCCCGTGAATGCCATGAGACAAGCTATCTCATGA

Coding sequence (CDS)

ATGGATGATGATGCTACGAATCCATTCCGACGCATGTCGAGCCGCAATCGTAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCGAGCAGCGACAACCGTACTCAGGCAGCTCTTGCTCGTCTCGAGGCACTGGAAAATGATAATGCCGGAGTGGAAGCAGTCGAAAACATTGACGATGAGGATGCTTCTCTCGATGATGATGAGCAAGCATACATACAGAAGCGGCAATCAAAGGGCACTAAGCGCAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAGGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGCAAATTTGGAGTCTTTGCCTCCACATGTTCCATCATACTTAAAGGCAGCCGTCGGACCTCCAAGCTCGACCTCCCGCCGGCATTTCTGCACGGTTTGTGGTTTTGCTGCTAGCTACACGTGCATAAGATGCAATCCCGTGAATGCCATGAGACAAGCTATCTCATGA

Protein sequence

MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDEDASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCNPVNAMRQAIS

Homology

[Close]

BLAST of Bhi10G000661 vs. TAIR 10
Match: AT5G37055.1 (HIT-type Zinc finger family protein )

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-49
Identity = 103/150 (68.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           M+++ +N  RR+S+R RKVA KM AAL S+DNRTQAA+ARLEALENDN  +E ++  DDE
Sbjct: 1   MEEEMSN--RRVSNRTRKVATKMAAALTSNDNRTQAAIARLEALENDNGAIEVIDLNDDE 60

Query: 61  DASLD-DDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYL 120
           +ASLD DD+  Y+QK+Q KG+KRKTRQAKALEA+KAPK+F+ELL EANLESLP HVP+YL
Sbjct: 61  EASLDEDDDLGYLQKKQHKGSKRKTRQAKALEARKAPKSFLELLQEANLESLPSHVPTYL 120

Query: 121 KAAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           KAAVGPPSS+SRR+FC+VCG+ A Y C  C
Sbjct: 121 KAAVGPPSSSSRRYFCSVCGYIAGYNCCLC 148

[Close]

BLAST of Bhi10G000661 vs. ExPASy Swiss-Prot
Match: Q9FHW2 (SWR1 complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=SWC6 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-48
Identity = 103/150 (68.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           M+++ +N  RR+S+R RKVA KM AAL S+DNRTQAA+ARLEALENDN  +E ++  DDE
Sbjct: 1   MEEEMSN--RRVSNRTRKVATKMAAALTSNDNRTQAAIARLEALENDNGAIEVIDLNDDE 60

Query: 61  DASLD-DDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYL 120
           +ASLD DD+  Y+QK+Q KG+KRKTRQAKALEA+KAPK+F+ELL EANLESLP HVP+YL
Sbjct: 61  EASLDEDDDLGYLQKKQHKGSKRKTRQAKALEARKAPKSFLELLQEANLESLPSHVPTYL 120

Query: 121 KAAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           KAAVGPPSS+SRR+FC+VCG+ A Y C  C
Sbjct: 121 KAAVGPPSSSSRRYFCSVCGYIAGYNCCLC 148

[Close]

BLAST of Bhi10G000661 vs. ExPASy Swiss-Prot
Match: Q54NW0 (Zinc finger HIT domain-containing protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=znhit1 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 13  SSRNRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVEAVENIDDEDASLDDDEQ 72
           SS+ +    K     +  D R    +   ARLE+L++DN         D+ED   +DDE 
Sbjct: 14  SSKRKSQISKRYRVTSEEDRRNLKEKVISARLESLDDDNEQQPIGSRGDEEDNDYNDDEN 73

Query: 73  AYIQKRQ-SKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSS 132
             +     +K      R+ K  E K     F ++L ++ LE+ P HVP+Y+ +    PS 
Sbjct: 74  EIVYTTPVNKKRLFIAREKKKNEKKSMNLNFNDVLEKSYLETFPDHVPTYI-SVQSKPSI 133

Query: 133 TSRRHFCTVCGFAASYTCIRCN 151
              RHFC++CG+  +YTC +C+
Sbjct: 134 FPPRHFCSICGYIGAYTCKQCS 154

[Close]

BLAST of Bhi10G000661 vs. ExPASy Swiss-Prot
Match: Q8R331 (Zinc finger HIT domain-containing protein 1 OS=Mus musculus OX=10090 GN=Znhit1 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 41/113 (36.28%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 40  RLEALENDNAGVE---AVENIDDEDASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAP 99
           +LEALENDN   +    +  +       DDD     +K++++G   K R           
Sbjct: 31  QLEALENDNFQDDPHAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLR---------FR 90

Query: 100 KTFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           K F  LL E NL +     P+YL A  GPP S  +R FC VCGF + YTC+ C
Sbjct: 91  KNFQALLEEQNLSA--SEGPNYLTACAGPP-SRPQRPFCAVCGFPSPYTCVSC 131

[Close]

BLAST of Bhi10G000661 vs. ExPASy Swiss-Prot
Match: Q24JY4 (Zinc finger HIT domain-containing protein 1 OS=Bos taurus OX=9913 GN=ZNHIT1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 46/143 (32.17%), Postives = 65/143 (45.45%), Query Frame = 0


Query: 10  RRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVE---AVENIDDEDASLDD 69
           ++ S R++    + V   A+   R      +LEALENDN   +    +  +       DD
Sbjct: 4   KKTSVRSQDPGQRRVLDRAARQRRIN---RQLEALENDNFQDDPHAGLPQLGKRLPQFDD 63

Query: 70  DEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPP 129
           D     +K++++G   K R           K F  LL E NL       P+YL A  GPP
Sbjct: 64  DADTGKKKKKTRGDHFKLR---------FRKNFQALLEEQNLS--VAEGPNYLTACAGPP 123

Query: 130 SSTSRRHFCTVCGFAASYTCIRC 150
            S  +R FC VCGF + YTC+ C
Sbjct: 124 -SRPQRPFCAVCGFPSPYTCVSC 131

[Close]

BLAST of Bhi10G000661 vs. ExPASy Swiss-Prot
Match: O43257 (Zinc finger HIT domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ZNHIT1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 46/143 (32.17%), Postives = 65/143 (45.45%), Query Frame = 0


Query: 10  RRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVE---AVENIDDEDASLDD 69
           ++ S R++    + V   A+   R      +LEALENDN   +    +  +       DD
Sbjct: 4   KKTSVRSQDPGQRRVLDRAARQRRIN---RQLEALENDNFQDDPHAGLPQLGKRLPQFDD 63

Query: 70  DEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPP 129
           D     +K++++G   K R           K F  LL E NL       P+YL A  GPP
Sbjct: 64  DADTGKKKKKTRGDHFKLR---------FRKNFQALLEEQNLS--VAEGPNYLTACAGPP 123

Query: 130 SSTSRRHFCTVCGFAASYTCIRC 150
            S  +R FC VCGF + YTC+ C
Sbjct: 124 -SRPQRPFCAVCGFPSPYTCVSC 131

[Close]

BLAST of Bhi10G000661 vs. NCBI nr
Match: XP_038901863.1 (SWR1 complex subunit 6 [Benincasa hispida] >XP_038901864.1 SWR1 complex subunit 6 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE
Sbjct: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK
Sbjct: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 149

[Close]

BLAST of Bhi10G000661 vs. NCBI nr
Match: XP_023512985.1 (SWR1 complex subunit 6 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATN FRRMSSR RKVAPKMVAALASSDNR+QAALARLEALENDNAG+E +ENIDDE
Sbjct: 21  MDDDATNSFRRMSSRTRKVAPKMVAALASSDNRSQAALARLEALENDNAGLELIENIDDE 80

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEA+LESLPPHVPSYLK
Sbjct: 81  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEASLESLPPHVPSYLK 140

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 141 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 169

[Close]

BLAST of Bhi10G000661 vs. NCBI nr
Match: XP_022943643.1 (SWR1 complex subunit 6 [Cucurbita moschata] >XP_022943644.1 SWR1 complex subunit 6 [Cucurbita moschata] >XP_022943645.1 SWR1 complex subunit 6 [Cucurbita moschata] >XP_022943647.1 SWR1 complex subunit 6 [Cucurbita moschata] >XP_022943648.1 SWR1 complex subunit 6 [Cucurbita moschata] >XP_023512986.1 SWR1 complex subunit 6 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023512987.1 SWR1 complex subunit 6 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATN FRRMSSR RKVAPKMVAALASSDNR+QAALARLEALENDNAG+E +ENIDDE
Sbjct: 1   MDDDATNSFRRMSSRTRKVAPKMVAALASSDNRSQAALARLEALENDNAGLELIENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEA+LESLPPHVPSYLK
Sbjct: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEASLESLPPHVPSYLK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 149

[Close]

BLAST of Bhi10G000661 vs. NCBI nr
Match: XP_004143171.1 (SWR1 complex subunit 6 [Cucumis sativus] >XP_011657114.1 SWR1 complex subunit 6 [Cucumis sativus] >XP_031743058.1 SWR1 complex subunit 6 [Cucumis sativus] >KGN47046.1 hypothetical protein Csa_020987 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68
Identity = 144/149 (96.64%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDD+TNPFRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAGVE VENIDDE
Sbjct: 1   MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK
Sbjct: 61  DASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 148

[Close]

BLAST of Bhi10G000661 vs. NCBI nr
Match: KAG7010486.1 (SWR1 complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATN FRRMSSR RKVAPKMVAALASSDNR+QAALARLEALENDNAG+E +ENIDDE
Sbjct: 58  MDDDATNSFRRMSSRTRKVAPKMVAALASSDNRSQAALARLEALENDNAGLELIENIDDE 117

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEA+LESLPPHVPSYLK
Sbjct: 118 DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEASLESLPPHVPSYLK 177

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 178 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 206

[Close]

BLAST of Bhi10G000661 vs. ExPASy TrEMBL
Match: A0A6J1FTL5 (SWR1 complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111448349 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.3e-69
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATN FRRMSSR RKVAPKMVAALASSDNR+QAALARLEALENDNAG+E +ENIDDE
Sbjct: 1   MDDDATNSFRRMSSRTRKVAPKMVAALASSDNRSQAALARLEALENDNAGLELIENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEA+LESLPPHVPSYLK
Sbjct: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEASLESLPPHVPSYLK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 149

[Close]

BLAST of Bhi10G000661 vs. ExPASy TrEMBL
Match: A0A0A0KH15 (HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181510 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.3e-69
Identity = 144/149 (96.64%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDD+TNPFRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAGVE VENIDDE
Sbjct: 1   MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK
Sbjct: 61  DASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 148

[Close]

BLAST of Bhi10G000661 vs. ExPASy TrEMBL
Match: A0A6J1JHH9 (SWR1 complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111484534 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 141/149 (94.63%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATN FRRMSSR RKVAPKMVAALASSDNR+QAALARLEALENDNAG+E +ENIDDE
Sbjct: 1   MDDDATNSFRRMSSRTRKVAPKMVAALASSDNRSQAALARLEALENDNAGLELIENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEA+LESLPPHVPSY+K
Sbjct: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEASLESLPPHVPSYIK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 149

[Close]

BLAST of Bhi10G000661 vs. ExPASy TrEMBL
Match: A0A1S3CKL9 (SWR1 complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103501880 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDD+TNPFRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAG+E VENIDDE
Sbjct: 1   MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGMEVVENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSY K
Sbjct: 61  DASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYFK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSSTSRRHFCTVCGFAASYTCIRC
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 148

[Close]

BLAST of Bhi10G000661 vs. ExPASy TrEMBL
Match: A0A6J1D2Z0 (SWR1 complex subunit 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017095 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 140/149 (93.96%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MDDDATNPFRRMSSRNRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEAVENIDDE 60
           MDDDATN FRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAG+E VENIDDE
Sbjct: 1   MDDDATNSFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGMELVENIDDE 60

Query: 61  DASLDDDEQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPHVPSYLK 120
           DASLDDD+ AYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPP+VPSYLK
Sbjct: 61  DASLDDDDLAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLESLPPYVPSYLK 120

Query: 121 AAVGPPSSTSRRHFCTVCGFAASYTCIRC 150
           AAVGPPSS+SRRHFCTVCGFAA+YTCIRC
Sbjct: 121 AAVGPPSSSSRRHFCTVCGFAATYTCIRC 149

The following BLAST results are available for this feature:

BLAST of Bhi10G000661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37055.1	1.9e-49	68.67	HIT-type Zinc finger family protein	[more]

BLAST of Bhi10G000661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHW2	2.7e-48	68.67	SWR1 complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=SWC6 PE=1 SV=1	[more]
Q54NW0	1.3e-07	30.99	Zinc finger HIT domain-containing protein 1 homolog OS=Dictyostelium discoideum ...	[more]
Q8R331	1.2e-05	36.28	Zinc finger HIT domain-containing protein 1 OS=Mus musculus OX=10090 GN=Znhit1 P...	[more]
Q24JY4	1.8e-04	32.17	Zinc finger HIT domain-containing protein 1 OS=Bos taurus OX=9913 GN=ZNHIT1 PE=2...	[more]
O43257	1.8e-04	32.17	Zinc finger HIT domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ZNHIT1 PE...	[more]

BLAST of Bhi10G000661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901863.1	2.5e-72	100.00	SWR1 complex subunit 6 [Benincasa hispida] >XP_038901864.1 SWR1 complex subunit ...	[more]
XP_023512985.1	1.3e-68	95.30	SWR1 complex subunit 6 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022943643.1	1.3e-68	95.30	SWR1 complex subunit 6 [Cucurbita moschata] >XP_022943644.1 SWR1 complex subunit...	[more]
XP_004143171.1	1.3e-68	96.64	SWR1 complex subunit 6 [Cucumis sativus] >XP_011657114.1 SWR1 complex subunit 6 ...	[more]
KAG7010486.1	1.3e-68	95.30	SWR1 complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Bhi10G000661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTL5	6.3e-69	95.30	SWR1 complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111448349 PE=4 SV=1	[more]
A0A0A0KH15	6.3e-69	96.64	HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181510 PE...	[more]
A0A6J1JHH9	1.1e-68	94.63	SWR1 complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111484534 PE=4 SV=1	[more]
A0A1S3CKL9	4.1e-68	95.30	SWR1 complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103501880 PE=4 SV=1	[more]
A0A6J1D2Z0	2.0e-67	93.96	SWR1 complex subunit 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017095...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR13093:SF1	BNACNNG31940D PROTEIN	coord: 1..150
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 131..150 e-value: 4.0E-6 score: 26.6
IPR039723	Vps71/ZNHIT1	PANTHER	PTHR13093	ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 1	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000661	Bhi10M000661	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043486	histone exchange
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000812	Swr1 complex
molecular_function	GO:0031491	nucleosome binding