Bhi09G002886 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002886
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Transmembrane protein
Location	chr9: 89000628 .. 89003113 (+)
RNA-Seq Expression	Bhi09G002886
Synteny	Bhi09G002886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCGGTCATTATCCTAAAAATAAGAACGTCGTTTCTTTCCCCTAATTTTGGGAAGCTGAAATATCTGAAATTTTGACCTTTCCATTCTGTGCACAGAAATCGCTGGGTTACGGCGACGGGCTGAAGGAAGAAGCTCATGGCGGGAGAAGAGGTTGCTGGTCCGGCAGGCCCTAAGGTTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATGTAATTCTTCGATTCACCTCTTTTATTTTCTGTTTTCGATTATGTGTTCTCCTATTCAGTTTATCATTCCATTCCATTATGTTATTCAGTCATTTTCACCATCGCGATAAACAAGTGGCGGGAGATCGAGCGTAATTCTCTGTTGGAACAACAGCAGAAGCAGCGGTTGAATCATCAATTGTCGGAATCTCGTAATGATTCGGTGCAGAAAGTCGTCGAGTGATCTTAGGTTAGTTTGTTATATTCTTGAATTTCTCAGGTTACATCGCTATTACGATATTAGGATAATGTTGTTGGATTCATAATTGATCATCCTGTGATTATAACTCTGGTGTGAGGTCTACCCCTTTTCTACGGATCACGACTCTGCTTACTTTCTGTAGCAATAATGGAAGCGGAAAACCCTTTTGATGATGTAGCTTTATCAACTATCGCCTATTAGAAGAGAAAGGTGTAGTGATTACACTAATTGAGTGCAAACATATTGAAAGTGTCATTGATGACTGAGGGGGAAGAAACAAACCTCTTTGAGATTAGAATTGTAAAGAAGAAGTAAGTGGGCCGTAACCAAAAAAGAATGGATAAAAATGGTTACCTATCTTTGACTTCTGTCTTATGAATTGTGATTGAGGTGTGCAATATGTATTGTCTTTTGTGATACAGTAGAGAAAAGGGAAACACAAACATATTGAGGAAGAGAATAAGCTCTCAGTCTGGCACACTAAGGCCGAATATTTCATATATATAGCTAGGTTTAAATGGTTACAAGATAGTTGTAAATCAAGACTAAACAAATAAATAATAAACCAAATTCAGATCATCTAAGCAGAATATAAAAAGGGCTTGATTGATAATTTAGTCTAGCTAACATCTTTACAATTTAACATGCGTATTGGCACCTTGAATTGTGGGATTCTGGCCCTTACACAGAGTGGTTCAGGCTTGTATCTGTTGTTGACTTGAAAAATGCTGTTGTAATTACACAACCAAGTGCAGCGCAGCATGATAAGCATGTTCTTTTATGCAGACTAGGCTAGCAGTAGTATTTGTTTTTTTCTGTCTTGTTCTTGATTTCCGTCTTTATCATATTGAGGATGAGCCAGAGAGGACATTATTTGAAAGAGAAAAAATAGTTGAAGTAATTAACTTAAGAATACAGCAGAAGTTATTGACTTTCTAGCTAGTAAACGAGGGATTTTTCTTTTGTGCAAGAGATTGGGCAAGTTTTGGACTTCTAGTTCATTCATTTGATGTATACCCCTTGGATTCAAATACCGTATTGTCTCATCTCAAAACAAAAGGGTGTGTAGTTGACTTTTTTGAGTGGCTATCCTGTCCCTTAGTTCTAATAATTCCCTTCAATTTTAAGATAATGCTTTCCTTTTCCACAAGCCAAGATTTCTAATGGACTTTAAAAAAAATGAGGCCTTAAGCATTTTCGTAGACTTTGTTGCGATAGCAACTAAAGTTTGTATAATGAAAGACTAGCTTATCCAAATTACTGTTCTAGAATATTTTATACTTCACCAAAACATCCTTCTAGGCACATCTGCATTAGTATGTCCTTTTCAATTCAAAAAGTGTCATGATAATTATTTTTATAATCAAAGCTTTAATGCTTTTGTGCTTGATGTGGATATCTTTCGGTGACAGTCATTTTATGGTCATTTGCTTAGTTCCATTACAAAGCTACATCTGCCAGAAATCCTTTGGACTTACATATTTAATTATAATTCATTTCTAGTGGAGGAATTATTGTTCTACACTCTAAATTTTATCACTAATATAACTTATTTTCTTTAAAATAAAAGAAATGGAAGGTATCCCAGAACCTACAAAGGACAGTTAATGTTCTCCTGTTTTATGCAAAATACGTAGATTTAATACTTAATTCAAGGCCCTTATTTTCCCTTTTAAGCTAATCCTTAGTGTTTACATGTCAGGGGTGCTGCTCAAGGATCTTAAGATGCTTTCAGCTCATCAGTTAAGTCCCTCACTTTCCACAAGATTTATCGTCATTGTTAAAACTTAAAAGTACATGTAGGATTTATCTATGTTTTTTAGCTGTGCTGCTGGGTAGATTTGAGCCAACACCAAGGAAATGATGTCTCTGTTAATAGTACTGTGTTTTCCTTCGTCCCTAATCCAGCCATCTCTTCTGTCTCTAATCTCTTTTATATGTACAAGTTCATCATGCTCTAAAGGAAACATCATTTTCAACTTGTACTACCAAAAGCGTTTCTAGTATTAATTTCTCCTTTGCTACCTGTTGGCCA

mRNA sequence

CGTCGGTCATTATCCTAAAAATAAGAACGTCGTTTCTTTCCCCTAATTTTGGGAAGCTGAAATATCTGAAATTTTGACCTTTCCATTCTGTGCACAGAAATCGCTGGGTTACGGCGACGGGCTGAAGGAAGAAGCTCATGGCGGGAGAAGAGGTTGCTGGTCCGGCAGGCCCTAAGGTTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATTCATTTTCACCATCGCGATAAACAAGTGGCGGGAGATCGAGCGTAATTCTCTGTTGGAACAACAGCAGAAGCAGCGGTTGAATCATCAATTGTCGGAATCTCGTAATGATTCGGTGCAGAAAGTCGTCGAGTGATCTTAGGGGTGCTGCTCAAGGATCTTAAGATGCTTTCAGCTCATCAGTTAAGTCCCTCACTTTCCACAAGATTTATCGTCATTGTTAAAACTTAAAAGTACATGTAGGATTTATCTATGTTTTTTAGCTGTGCTGCTGGGTAGATTTGAGCCAACACCAAGGAAATGATGTCTCTGTTAATAGTACTGTGTTTTCCTTCGTCCCTAATCCAGCCATCTCTTCTGTCTCTAATCTCTTTTATATGTACAAGTTCATCATGCTCTAAAGGAAACATCATTTTCAACTTGTACTACCAAAAGCGTTTCTAGTATTAATTTCTCCTTTGCTACCTGTTGGCCA

Coding sequence (CDS)

ATGGCGGGAGAAGAGGTTGCTGGTCCGGCAGGCCCTAAGGTTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATTCATTTTCACCATCGCGATAAACAAGTGGCGGGAGATCGAGCGTAATTCTCTGTTGGAACAACAGCAGAAGCAGCGGTTGAATCATCAATTGTCGGAATCTCGTAATGATTCGGTGCAGAAAGTCGTCGAGTGA

Protein sequence

MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDSVQKVVE

Homology

[Close]

BLAST of Bhi09G002886 vs. TAIR 10
Match: AT1G16916.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-12
Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 8  GPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRNDSVQKVV 67
          GP  PK+LR++YF GAGF+ T AINKWRE+ERNSLL+Q+Q++     +     DSVQK +
Sbjct: 5  GPPAPKMLRMVYFVGAGFLCTFAINKWREMERNSLLKQEQEKNQQGDVGLLPRDSVQKAM 64

Query: 68 E 69
          +
Sbjct: 65 K 65

[Close]

BLAST of Bhi09G002886 vs. ExPASy TrEMBL
Match: A0A5D3DXD1 (Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00850 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60
          M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+Q QKQRLNHQLSESRN
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DSVQKVVE 69
          D+VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]

BLAST of Bhi09G002886 vs. ExPASy TrEMBL
Match: A0A1S3CKG5 (uncharacterized protein LOC103501828 OS=Cucumis melo OX=3656 GN=LOC103501828 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60
          M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+Q QKQRLNHQLSESRN
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DSVQKVVE 69
          D+VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]

BLAST of Bhi09G002886 vs. ExPASy TrEMBL
Match: A0A0A0L208 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625040 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60
          M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DSVQKVVE 69
          D+VQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]

BLAST of Bhi09G002886 vs. ExPASy TrEMBL
Match: A0A090ITT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-23
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60
          M G+EV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES N
Sbjct: 1  MTGKEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DSVQKVVE 69
          D+VQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]

BLAST of Bhi09G002886 vs. ExPASy TrEMBL
Match: A0A6J1C1U1 (uncharacterized protein LOC111006563 OS=Momordica charantia OX=3673 GN=LOC111006563 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21
Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60
          MAGEEV+GPAGPKVLR LYFAGAGF+F IA+NKWRE+ER SLL+Q QKQ LNHQ SE+ N
Sbjct: 1  MAGEEVSGPAGPKVLRFLYFAGAGFVFAIAVNKWREMERRSLLQQHQKQMLNHQFSETPN 60

Query: 61 DSVQKVVE 69
          D+VQKVVE
Sbjct: 61 DAVQKVVE 68

The following BLAST results are available for this feature:

BLAST of Bhi09G002886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16916.1	2.3e-12	54.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi09G002886 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi09G002886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXD1	1.3e-23	86.76	Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]
A0A1S3CKG5	1.3e-23	86.76	uncharacterized protein LOC103501828 OS=Cucumis melo OX=3656 GN=LOC103501828 PE=...	[more]
A0A0A0L208	1.7e-23	86.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625040 PE=4 SV=1	[more]
A0A090ITT6	4.9e-23	85.29	Uncharacterized protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A6J1C1U1	1.6e-21	79.41	uncharacterized protein LOC111006563 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002886	Bhi09M002886	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane