Bhi09G001445 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G001445
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr9: 46931047 .. 46931667 (-)
RNA-Seq Expression	Bhi09G001445
Synteny	Bhi09G001445

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGAACTGCAAAAGGTTTCAGTCAAAACCACAAAGTCCAACAAAGGAACCAAAATTTTCAACACAGGAACAAGAAACCCCGAAATCCAAGGAACTGTGAGAAGTGAAAGCAAGAAAAAAGGGAAACACATCATAGACGTCCCCGATCGGGTCTACAAAATTCAACAAGAAGATGAAATTGAGGTCACTTCAAAACCCACGAACACAAGACGAAAGAAACAAGAGAAGGAAGTAATAGAATTACCAAAAGAAAAAGGAGTGAAATCAAAGCAAAATCACGAACTGGGTTAGTTTCTTTTAGCTTCTAATCCCCAAATTGGCAAAGTCCAAGCAGTCTTCCCCCAACTCGAAAGCTCTTAATCGAAGATCTCCCACAACCCAGTTGGCAAATTGAAGAAACTTGTGCGTCGCTGGGTCTGTACGCTCGGTTTGCTGTTTGTCTTGAACTGCTGGAACACCAGAGTTGAGTGGGTCGCTGTGGGATCGAGTTCGCCGAATCCGCGTGGAGGGTTACTCAACAAAGGTGCTGCACCGTTGCTACTCGTCGCCGGAGGAACGCCCGTCGTCGTGGGTGCTGTAATGCCGCCGCCGGCGATGTTTATTGCCGGAATGAAGTGA

mRNA sequence

ATGAGTGAACTGCAAAAGGTTTCAGTCAAAACCACAAAGTCCAACAAAGGAACCAAAATTTTCAACACAGGAACAAGAAACCCCGAAATCCAAGGAACTGTGAGAAGTGAAAGCAAGAAAAAAGGGAAACACATCATAGACGTCCCCGATCGGGTCTACAAAATTCAACAAGAAGATGAAATTGAGGTCACTTCAAAACCCACGAACACAAGACGAAAGAAACAAGAGAAGGAAGTAATAGAATTACCAAAAGAAAAAGGAGTGAAATCAAAGCAAAATCACGAACTGGTTGGCAAATTGAAGAAACTTGTGCGTCGCTGGGTCTGTACGCTCGGTTTGCTGTTTGTCTTGAACTGCTGGAACACCAGAGTTGAGTGGGTCGCTGTGGGATCGAGTTCGCCGAATCCGCGTGGAGGGTTACTCAACAAAGGTGCTGCACCGTTGCTACTCGTCGCCGGAGGAACGCCCGTCGTCGTGGGTGCTGTAATGCCGCCGCCGGCGATGTTTATTGCCGGAATGAAGTGA

Coding sequence (CDS)

ATGAGTGAACTGCAAAAGGTTTCAGTCAAAACCACAAAGTCCAACAAAGGAACCAAAATTTTCAACACAGGAACAAGAAACCCCGAAATCCAAGGAACTGTGAGAAGTGAAAGCAAGAAAAAAGGGAAACACATCATAGACGTCCCCGATCGGGTCTACAAAATTCAACAAGAAGATGAAATTGAGGTCACTTCAAAACCCACGAACACAAGACGAAAGAAACAAGAGAAGGAAGTAATAGAATTACCAAAAGAAAAAGGAGTGAAATCAAAGCAAAATCACGAACTGGTTGGCAAATTGAAGAAACTTGTGCGTCGCTGGGTCTGTACGCTCGGTTTGCTGTTTGTCTTGAACTGCTGGAACACCAGAGTTGAGTGGGTCGCTGTGGGATCGAGTTCGCCGAATCCGCGTGGAGGGTTACTCAACAAAGGTGCTGCACCGTTGCTACTCGTCGCCGGAGGAACGCCCGTCGTCGTGGGTGCTGTAATGCCGCCGCCGGCGATGTTTATTGCCGGAATGAAGTGA

Protein sequence

MSELQKVSVKTTKSNKGTKIFNTGTRNPEIQGTVRSESKKKGKHIIDVPDRVYKIQQEDEIEVTSKPTNTRRKKQEKEVIELPKEKGVKSKQNHELVGKLKKLVRRWVCTLGLLFVLNCWNTRVEWVAVGSSSPNPRGGLLNKGAAPLLLVAGGTPVVVGAVMPPPAMFIAGMK

Homology

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BLAST of Bhi09G001445 vs. ExPASy TrEMBL
Match: A0A0A0LDY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G765080 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-04
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 1  MSELQKVSV--KTTKSNKGTKIFNTGTRNPEIQGTVRSESKKK 42
          MSELQKVSV  K TKSNK  + FNTG R PEIQG+V SESK+K
Sbjct: 26 MSELQKVSVKLKNTKSNKAIQFFNTGKRKPEIQGSVSSESKQK 68

The following BLAST results are available for this feature:

BLAST of Bhi09G001445 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi09G001445 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi09G001445 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDY0	3.5e-04	72.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G765080 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001445	Bhi09M001445	mRNA