Bhi09G000148 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G000148
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein THYLAKOID ASSEMBLY 8, chloroplastic
Location	chr9: 3850449 .. 3851853 (-)
RNA-Seq Expression	Bhi09G000148
Synteny	Bhi09G000148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTTATCTTGCAGGGAGTAGTCTTCCCTAGATTATAAATTCAGGGTTGTTACGACATAAGAATTAAGTATATACATACCTTATAAAAAATTTGGCATCAACATATTACTTACCATCCTAAGCTAAATTTAAGCACAGCTCAACGGTAAAGACACCTCTTCCCCCAAGAGTTCATATACTCGAATTCATACCTCACTAAAGGAAGAAAAAAACAGAAAAAAGGAATACAAGCAGGTTATTGGGCTCATTTCCAACTAACAGCCCAACAGAATAAGTCGAGTAGACAAGTTACAAGGCCCAACATTACCCAACTAAGGGCCCAATTGAAAAACACATCAATGGGCCAAGCCCAAGTTCTGTTACACATTCAGTTTCCCCCTCAACGCTCAGCAAGGGCATTACAGTCATTGCAAAATCCCCAATCTGCACTCCGCCATGGCTTCTTCAATTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGTTTCCGCCGCGGCTGCCGTCGCCGTTTCCCTTCCGGTACGCTGTGGCCCTCGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCCATTCAATCTCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCTCCCTGAAGGAGCTCCTCCGGCAGGACCGGTGCGCCCTCGCCTTGGAGGTTTTCGCCGTAATCCGATCGGAGTATGGCGCCGATTTGGGGATGTACGCGGAGGTGGCGGCGGCGCTGTCGAGGAACGGAGCAGCGGAGGAAATCGACCGGCTGGTTTGCGACTTGGACGGCGGAGATGTGCTGATTCAGTGGGATGATAAGGGTTTGATTAAGTTGATCAAGGCGGTGATTAGTGGGGATAGAAGGGAATCAACGGTCAGGATTTATCGGATGATGAGGAGGAACGGTTGGGGATCTACCATCAAAGCTGATGATTATTTGGTTAGGGTCTTGAGCAAGGGTTTAAGGAGGTTTGGGGAAATGGAGTTGGCTGATGAGATCAATAGGGAATTTCAAGATTTAGTGGGCAATGTTTGAAAATTTTGTAAGTTGGTACATTGACACAAAATGTTTTTTATTTTATTTTATTTTATTTTATTACTATTTTTTTTTAATTCTCTGTCTGTGTTGTATTATAAAATTGCAATATTATGAGGTGTTTGGCTTACCAACTTCATAAGTTGATGTTAACTTAGACTATGTTTACACGGAAAAGTAATAAATGAATAGTAATCTAAAAAGTGGATCAGAATGAATATTTTTATTTACCTTGTGTTTTGCATTTGTAACGACATGTGGGGGCCATTGTCCAAATAGTAGAGGG

mRNA sequence

GTCTTATCTTGCAGGGAGTAGTCTTCCCTAGATTATAAATTCAGGGTTGTTACGACATAAGAATTAAGTATATACATACCTTATAAAAAATTTGGCATCAACATATTACTTACCATCCTAAGCTAAATTTAAGCACAGCTCAACGGTAAAGACACCTCTTCCCCCAAGAGTTCATATACTCGAATTCATACCTCACTAAAGGAAGAAAAAAACAGAAAAAAGGAATACAAGCAGGTTATTGGGCTCATTTCCAACTAACAGCCCAACAGAATAAGTCGAGTAGACAAGTTACAAGGCCCAACATTACCCAACTAAGGGCCCAATTGAAAAACACATCAATGGGCCAAGCCCAAGTTCTGTTACACATTCAGTTTCCCCCTCAACGCTCAGCAAGGGCATTACAGTCATTGCAAAATCCCCAATCTGCACTCCGCCATGGCTTCTTCAATTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGTTTCCGCCGCGGCTGCCGTCGCCGTTTCCCTTCCGGTACGCTGTGGCCCTCGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCCATTCAATCTCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCTCCCTGAAGGAGCTCCTCCGGCAGGACCGGTGCGCCCTCGCCTTGGAGGTTTTCGCCGTAATCCGATCGGAGTATGGCGCCGATTTGGGGATGTACGCGGAGGTGGCGGCGGCGCTGTCGAGGAACGGAGCAGCGGAGGAAATCGACCGGCTGGTTTGCGACTTGGACGGCGGAGATGTGCTGATTCAGTGGGATGATAAGGGTTTGATTAAGTTGATCAAGGCGGTGATTAGTGGGGATAGAAGGGAATCAACGGTCAGGATTTATCGGATGATGAGGAGGAACGGTTGGGGATCTACCATCAAAGCTGATGATTATTTGGTTAGGGTCTTGAGCAAGGGTTTAAGGAGGTTTGGGGAAATGGAGTTGGCTGATGAGATCAATAGGGAATTTCAAGATTTAGTGGGCAATGTTTGAAAATTTTGTAAGTTGGTACATTGACACAAAATGTTTTTTATTTTATTTTATTTTATTTTATTACTATTTTTTTTTAATTCTCTGTCTGTGTTGTATTATAAAATTGCAATATTATGAGGTGTTTGGCTTACCAACTTCATAAGTTGATGTTAACTTAGACTATGTTTACACGGAAAAGTAATAAATGAATAGTAATCTAAAAAGTGGATCAGAATGAATATTTTTATTTACCTTGTGTTTTGCATTTGTAACGACATGTGGGGGCCATTGTCCAAATAGTAGAGGG

Coding sequence (CDS)

ATGGCTTCTTCAATTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGTTTCCGCCGCGGCTGCCGTCGCCGTTTCCCTTCCGGTACGCTGTGGCCCTCGGGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCCATTCAATCTCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCTCCCTGAAGGAGCTCCTCCGGCAGGACCGGTGCGCCCTCGCCTTGGAGGTTTTCGCCGTAATCCGATCGGAGTATGGCGCCGATTTGGGGATGTACGCGGAGGTGGCGGCGGCGCTGTCGAGGAACGGAGCAGCGGAGGAAATCGACCGGCTGGTTTGCGACTTGGACGGCGGAGATGTGCTGATTCAGTGGGATGATAAGGGTTTGATTAAGTTGATCAAGGCGGTGATTAGTGGGGATAGAAGGGAATCAACGGTCAGGATTTATCGGATGATGAGGAGGAACGGTTGGGGATCTACCATCAAAGCTGATGATTATTTGGTTAGGGTCTTGAGCAAGGGTTTAAGGAGGTTTGGGGAAATGGAGTTGGCTGATGAGATCAATAGGGAATTTCAAGATTTAGTGGGCAATGTTTGA

Protein sequence

MASSIHSTFLKSQISIPIPVSAAAAVAVSLPVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFAVIRSEYGADLGMYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDKGLIKLIKAVISGDRRESTVRIYRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDLVGNV

Homology

[Close]

BLAST of Bhi09G000148 vs. TAIR 10
Match: AT3G27750.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 9.5e-47
Identity = 103/191 (53.93%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 32  VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLV 91
           +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +     LS T   L RL+K+DL+
Sbjct: 31  IRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVS-----LSLTLRPLRRLIKSDLI 90

Query: 92  ASLKELLRQDRCALALEVFAVIRSEY-GADLGMYAEVAAALSRNGAAEEIDRLVCDLDGG 151
           + L+ELLRQD C LA+ V + +R+EY   DL +YA++  AL+RN   +EIDRL+ ++DG 
Sbjct: 91  SVLRELLRQDYCTLAVHVLSTLRTEYPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGI 150

Query: 152 DVLIQWDDKGLIKLIKAVISGDRRESTVRIYRMMRRNGWGS-TIKADDYLVRVLSKGLRR 211
           D   + DDK L KLI+AV+  +RRES VR+Y +MR +GWGS + +AD+Y+  VLSKGL R
Sbjct: 151 DQ--RSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLR 210

Query: 212 FGEMELADEIN 218
            GE +LA +++
Sbjct: 211 LGEPDLASQVS 214

[Close]

BLAST of Bhi09G000148 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-17
Identity = 69/206 (33.50%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 39  NRGPLVKGRTLSIEAIQAIQSLKRAE--------------RSDPTKLQQVLSTTLSRLLK 98
           NR PL +GR LSIEAIQA+Q+LKRA                S    L +V+ +   RLLK
Sbjct: 495 NRKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLK 554

Query: 99  ADLVASLKELLRQDRCALALEVFAVIRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVC 158
            D+VA L+ELLRQ+ C+LAL+VF  IR E  Y   + MY ++   ++ N   EE++ L  
Sbjct: 555 FDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYS 614

Query: 159 DLDGGDVL---IQWDDKGLIKLIKAVISGDRRESTVRIYRMMRRNGWGSTIKADDYLVRV 218
            +     L   I+W +     L+  +++    +  +  Y  M+  G+    + D    RV
Sbjct: 615 AMKSEKGLMAEIEWFN----TLLTILLNHKLFDLVMDCYAFMQSIGY----EPDRASFRV 674

Query: 219 LSKGLRRFGEMELADEINREFQDLVG 226
           L  GL   GEM L+  + ++  +  G
Sbjct: 675 LVLGLESNGEMGLSAIVRQDAHEYYG 692

[Close]

BLAST of Bhi09G000148 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-09
Identity = 50/177 (28.25%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 49  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFA 108
           +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ++  L ++++ 
Sbjct: 1   MSKEGLIAAKELKRLQ-TQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYE 60

Query: 109 VIRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDKGLIKLIKAVI 168
           V+R E  Y  D+  Y ++   L+RN   +E  ++  DL   +VL  +D      L++  +
Sbjct: 61  VVRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVL--FDQHTFGDLVRGFL 120

Query: 169 SGDRRESTVRIYRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDL 224
             +     +R+Y  MR     S  +      RV+ KGL  +   EL +++  +F +L
Sbjct: 121 DNELPLEAMRLYGEMRE----SPDRPLSLPFRVILKGLVPY--PELREKVKDDFLEL 168

[Close]

BLAST of Bhi09G000148 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 53/187 (28.34%), Postives = 97/187 (51.87%), Query Frame = 0


Query: 40  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQD 99
           RGPL +G+ L   EA+  I  LKR  + D  KL + + T + RLLK D++A + EL RQ+
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRL-KEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 100 RCALALEVFAVIRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDK 159
             ALA+++F VI+ +  Y  D+ MY ++  +L+++   +E   L   +   ++    D +
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFP--DSQ 182

Query: 160 GLIKLIKAVISGDRRESTVRIYRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEI 219
              ++I+  +        + +Y  M +    S    ++   RVL KGL       L +++
Sbjct: 183 TYTEVIRGFLRDGCPADAMNVYEDMLK----SPDPPEELPFRVLLKGL--LPHPLLRNKV 240

Query: 220 NREFQDL 224
            ++F++L
Sbjct: 243 KKDFEEL 240

[Close]

BLAST of Bhi09G000148 vs. ExPASy Swiss-Prot
Match: Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-45
Identity = 103/191 (53.93%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 32  VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLV 91
           +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +     LS T   L RL+K+DL+
Sbjct: 31  IRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVS-----LSLTLRPLRRLIKSDLI 90

Query: 92  ASLKELLRQDRCALALEVFAVIRSEY-GADLGMYAEVAAALSRNGAAEEIDRLVCDLDGG 151
           + L+ELLRQD C LA+ V + +R+EY   DL +YA++  AL+RN   +EIDRL+ ++DG 
Sbjct: 91  SVLRELLRQDYCTLAVHVLSTLRTEYPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGI 150

Query: 152 DVLIQWDDKGLIKLIKAVISGDRRESTVRIYRMMRRNGWGS-TIKADDYLVRVLSKGLRR 211
           D   + DDK L KLI+AV+  +RRES VR+Y +MR +GWGS + +AD+Y+  VLSKGL R
Sbjct: 151 DQ--RSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLR 210

Query: 212 FGEMELADEIN 218
            GE +LA +++
Sbjct: 211 LGEPDLASQVS 214

[Close]

BLAST of Bhi09G000148 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.5e-08
Identity = 50/177 (28.25%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 49  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFA 108
           +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ++  L ++++ 
Sbjct: 1   MSKEGLIAAKELKRLQ-TQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYE 60

Query: 109 VIRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDKGLIKLIKAVI 168
           V+R E  Y  D+  Y ++   L+RN   +E  ++  DL   +VL  +D      L++  +
Sbjct: 61  VVRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVL--FDQHTFGDLVRGFL 120

Query: 169 SGDRRESTVRIYRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDL 224
             +     +R+Y  MR     S  +      RV+ KGL  +   EL +++  +F +L
Sbjct: 121 DNELPLEAMRLYGEMRE----SPDRPLSLPFRVILKGLVPY--PELREKVKDDFLEL 168

[Close]

BLAST of Bhi09G000148 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 53/187 (28.34%), Postives = 97/187 (51.87%), Query Frame = 0


Query: 40  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQD 99
           RGPL +G+ L   EA+  I  LKR  + D  KL + + T + RLLK D++A + EL RQ+
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRL-KEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 100 RCALALEVFAVIRSE--YGADLGMYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDK 159
             ALA+++F VI+ +  Y  D+ MY ++  +L+++   +E   L   +   ++    D +
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFP--DSQ 182

Query: 160 GLIKLIKAVISGDRRESTVRIYRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEI 219
              ++I+  +        + +Y  M +    S    ++   RVL KGL       L +++
Sbjct: 183 TYTEVIRGFLRDGCPADAMNVYEDMLK----SPDPPEELPFRVLLKGL--LPHPLLRNKV 240

Query: 220 NREFQDL 224
            ++F++L
Sbjct: 243 KKDFEEL 240

[Close]

BLAST of Bhi09G000148 vs. ExPASy TrEMBL
Match: A0A6J1GQS0 (protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456620 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 8.0e-102
Identity = 198/226 (87.61%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MASSIHSTFLKSQISIPIPVSAAAAVAVSLPVRCGPRDNRGPLVKGRTLSIEAIQAIQSL 60
           MA S+HSTFLKSQI IPIP+SAAA V VSLPVRCGPRDNRGPLVKGRTLS EAIQAIQSL
Sbjct: 1   MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSL 60

Query: 61  KRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFAVIRSEYGADLGM 120
           KRAE+SDPTKL+QVLSTTLSRLLKADLVA+LKELLRQDRCALALEVFAV+RSEYGADLGM
Sbjct: 61  KRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSEYGADLGM 120

Query: 121 YAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDKGLIKLIKAVISGDRRESTVRIYRM 180
           YAEVAAALSRNGA EEIDRLVCDL+  D +IQ DDKGLIKLIKAVI GDRRESTVRIYRM
Sbjct: 121 YAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRM 180

Query: 181 MRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDLVGN 227
           M+R+GWGSTIKADDY VRVLSKGLRR GEME+ADE+N +FQDLVG+
Sbjct: 181 MKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDLVGS 226

[Close]

BLAST of Bhi09G000148 vs. ExPASy TrEMBL
Match: A0A6J1JTE8 (protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488709 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 197/226 (87.17%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MASSIHSTFLKSQISIPIPVSAAAAVAVSLPVRCGPRDNRGPLVKGRTLSIEAIQAIQSL 60
           MA S+HSTFLKSQI IPIP+SA A V VSLPVRCGPRDNRGPLVKGRTLS EAIQAIQSL
Sbjct: 1   MAFSLHSTFLKSQIPIPIPISATATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSL 60

Query: 61  KRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFAVIRSEYGADLGM 120
           KRAE+SDPTKL+QVLSTTLSRLLKADLVA+LKELLRQDRCALALEVFAV+RSEYG DLGM
Sbjct: 61  KRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSEYGVDLGM 120

Query: 121 YAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQWDDKGLIKLIKAVISGDRRESTVRIYRM 180
           YAEVAAALSRNGA EEIDRLVCDL+  D +IQ DDKGLIKLIKAVI GDRRESTVRIYRM
Sbjct: 121 YAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRM 180

Query: 181 MRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDLVGN 227
           M+R+GWGSTIKADDY+VRVLSKGLRR GEME+ADEIN +FQDLVG+
Sbjct: 181 MKRSGWGSTIKADDYMVRVLSKGLRRLGEMEMADEINMQFQDLVGS 226

[Close]

BLAST of Bhi09G000148 vs. ExPASy TrEMBL
Match: A0A1S3CGD3 (uncharacterized protein LOC103500597 OS=Cucumis melo OX=3656 GN=LOC103500597 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 202/230 (87.83%), Postives = 217/230 (94.35%), Query Frame = 0


Query: 1   MASSIHSTFLKSQISIPIPVS-AAAAVAVSLPVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASS+HSTFLKSQISIPIP S A AAVAVS  VRCGPRDNRGPLVKGRTLSIEAIQAIQS
Sbjct: 28  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 87

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFAVIRSEYGADLG 120
           LKRAERSDPTKLQQVLSTTLSRLLKADLVA+LKELLRQ+RCALALEVFAVIRSEY A+LG
Sbjct: 88  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSEYRAELG 147

Query: 121 MYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQW--DDKGLIKLIKAVISGDRRESTVRI 180
           +YAEVAAALSRNGAAEEIDRLVCDLDG D +I+W  DDKGLIKLIKAVISG+RRESTVRI
Sbjct: 148 LYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 207

Query: 181 YRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDLVGNV 228
           YRMMRRNGWGS IK DDY+++V+SKGLRR GE+ELADEINREFQDLVG++
Sbjct: 208 YRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEINREFQDLVGSL 257

[Close]

BLAST of Bhi09G000148 vs. ExPASy TrEMBL
Match: A0A5A7V0E2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002110 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 201/230 (87.39%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 1   MASSIHSTFLKSQISIPIPVS-AAAAVAVSLPVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASS+ STFLKSQISIPIP S A AAVAVS  VRCGPRDNRGPLVKGRTLSIEAIQAIQS
Sbjct: 1   MASSLRSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFAVIRSEYGADLG 120
           LKRAERSDPTKLQQVLSTTLSRLLKADLVA+LKELLRQ+RCALALEVFAVIRSEY A+LG
Sbjct: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSEYRAELG 120

Query: 121 MYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQW--DDKGLIKLIKAVISGDRRESTVRI 180
           +YAEVAAALSRNGAAEEIDRLVCDLDG D +I+W  DDKGLIKLIKAVISG+RRESTVRI
Sbjct: 121 LYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180

Query: 181 YRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDLVGNV 228
           YRMMRRNGWGS IK DDY+++V+SKGLRR GE+ELADEINREFQDLVG++
Sbjct: 181 YRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGELELADEINREFQDLVGSL 230

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BLAST of Bhi09G000148 vs. ExPASy TrEMBL
Match: A0A0A0K6N6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447050 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 199/229 (86.90%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MASSIHSTFLKSQISIPIPVSAAAA-VAVSLPVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60
           MASS+HSTFLKSQISIPIP S A + VAVS  VRCGPRDNRGPLVKGRTLSIEAIQAIQS
Sbjct: 1   MASSLHSTFLKSQISIPIPASTATSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQS 60

Query: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVASLKELLRQDRCALALEVFAVIRSEYGADLG 120
           LKRAERSDPTKLQQVLSTTLSRLLKADLVA+LKELLRQ+RCALALEVFAVI+SEY A+LG
Sbjct: 61  LKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSEYRAELG 120

Query: 121 MYAEVAAALSRNGAAEEIDRLVCDLDGGDVLIQW--DDKGLIKLIKAVISGDRRESTVRI 180
           +YAEVAAALSRNGAAEEIDRLV DLDGGD +I+W  DDKGLIKLIKAVISG+RRESTVRI
Sbjct: 121 LYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRI 180

Query: 181 YRMMRRNGWGSTIKADDYLVRVLSKGLRRFGEMELADEINREFQDLVGN 227
           YRMMRR GWGS IKADDY+++VLSKGLRR GE+ELADEINREF+DLVG+
Sbjct: 181 YRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVGS 229

The following BLAST results are available for this feature:

BLAST of Bhi09G000148 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27750.1	9.5e-47	53.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G09320.1	3.5e-17	33.50	Vacuolar sorting protein 9 (VPS9) domain	[more]
AT1G62350.1	4.6e-09	28.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G46870.1	1.3e-08	28.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Bhi09G000148 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVW6	1.3e-45	53.93	Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T...	[more]
Q1PFH7	6.5e-08	28.25	Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX...	[more]
Q9STF9	1.9e-07	28.34	Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Bhi09G000148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQS0	8.0e-102	87.61	protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JTE8	2.3e-101	87.17	protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CGD3	3.0e-101	87.83	uncharacterized protein LOC103500597 OS=Cucumis melo OX=3656 GN=LOC103500597 PE=...	[more]
A0A5A7V0E2	2.0e-100	87.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K6N6	1.7e-99	86.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447050 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 48..223 e-value: 6.6E-29 score: 102.8
None	No IPR available	PANTHER	PTHR47594:SF3	PROTEIN THYLAKOID ASSEMBLY 8, CHLOROPLASTIC	coord: 19..224
IPR044190	Protein THYLAKOID ASSEMBLY 8-like	PANTHER	PTHR47594	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 19..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000148	Bhi09M000148	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding