Bhi09G000051 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000051
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Description(6-4)DNA photolyase
Locationchr9: 1074741 .. 1077688 (-)
RNA-Seq ExpressionBhi09G000051
SyntenyBhi09G000051
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTCCCGGTAACTTTATCAATTTATCTTTCTTTTTCCAATCCCTACCTTTTTTTTGCTTCTCTCATGGCGACCAATCTTGCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCTTCTGGAAAATCCGAACCTAATCGCCGGAAGGCCACCGCGCCAAAGTGGTGGTCCCCGATCTTCGGCTGGTCTTCCGAACCGGATTACGTCCTTTCTTCCGCCGCGGAACAGTCGGTTCTGAATGCCGAACCGGAGCTCGAAGGTGGAAGAACCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTTCTCCGAATGAAAACGCTGGAGAGCTCCACTTTCCATGACATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATCTACGAAGTTTGGCGCAGTGAGGTATTGTATTGTGTTTTTGGAAATCTGTATCTGTACTGCCTTTTTTCTGTAAATCATCGTAATAACGAAAAATTTGGGGAAGGACGTAATTCTTCATTTCCTAATAAATTTACCTCTTCTCTTGCCTTTTAGAACGTTTAGATTACGGAAACTTCATACCTACTGCAACTATTTTCCGTCTGATTATTGATCGACGACGATTGATTTTACATTGTTTTCTCATTATAATCAGTCTATTTGCATCATTGAAATGGCTGTAGATGAATCATACATCTTGATGTTGACGGCCTAGAAATCTACGCCGGCTGTTGTTAATTTTACAACTAAATAGTGATTAGTGAAGTGATTATCTAAATCTTTCCTTATCGATTCTTCTTGGTGTCAATGGAGTTGAGAAAGAATTTGATGAGATGTTTGAGTAATCATCTCGAGTGGATAATTTACATAATTTTTAAATGGATCTTCACTGTTTAAGTTGGATTATCTATAATTGAATCCAGACGAATTTTCTGTACGGTGAATGATCTAGTTTTTGGATCGAACAATTTATTTGTTTAATTGAGGAGGAATTATTACAATGGTTGTTCTTTTATGGAGAGCTAAAAAATCCCCATCGGTTTTCATTTAATTTGTTACAAAATCTGATGGATTTGAAGACTTTCATGAATTTAATTGGAATGGATTTTGTTAATACATTCAGTTAATCGGATTACAATTCAATTGATCTTAAAAAAATCGTCGTGACATTTATTAATTATTATTTTGGATAAGGTTATTTAATTTAATATTTATTTCGTTAGTTGGGCTTAATTTTCACAATTATATTCGATGTAGTTGAAAAGAAAAAAGTTGAATTAAACAAAATATTATTCTTTTTATTTCTGAAATAAATGTTCTATAAATGAAAAAATTTTAAATAGTCTAACTCAAATATTGAAATTGCCGTCACTTTAATTTGAATATTAAAAAAAAAAATTATGAGAGTTTGTGTTTTGATAAAGCATAAACTATTTAACTAAAATACATTTTATTTTCTTGAAATGTAAGGCGGAAATTTCGGTCTATTATTTTAATCTGCATATTAATTCTGGAAAATAGAAAAAAGTATTTAAAAGAATGACGAATGTCTTTAATTATGTCAAGGGGAGGGTGCTGTTCTATCTAATATATATATATATTTTACTTTCAATAACAAAAATCATGATTATTTAGATTAATTAATTCGAGCAGTTGTTTTCGAATTAGGTCACGAAGTGTAATAAATAAATAATCACAAAGAAGGGAATCTCGATGACTCACGAACACGAGTGATGATAAAATAAGCAAAAATTCTTTCTTTTAGCTATGACTAAATGTTAAGTTAAGAAATGTATTATTATTATTATTATTATTATTTCGTGAAAATATCAGCTACATACAAGTTAAATCACCAACATTACGACGACATTAAATCCTCCTTTAAAATAAGAAGGGGGAATTACTCAATAAATTGAGAAAAACCATCCTAACTTATTATTAATTTTTTTAAAAAATATGTTGTTTTTAGAAAAAGTATTTCAAATGATAAAAATATTTATAAATATAGCAAAATTTTAAAATCTATGACATTGTTACACCCCTGTTACACACCAGGATCTATCCTTGATAAATTTTAAAATTTTGTTATAGTTTTAATATTTTGGTTCATTTTACTATATTTGGAAACAATCCTCGTTTTTATTTATGATACAATTATTTTTCATATATTTATATTTATTTTATATTCATAATTTTTTTTGGTTAATTCATTCTCCAACAACTCCTAAAAATAAATTTTAAGCACTTTAGAAAAAAGATTATGATATAAATTGAAATTAAGCTATTAATCTTAATTTAAGTATATGAAAATAATTAAATGAAAATTTGACATATTAACATTTTATTTAATTTTAAAATAAAAAATTGAAAAAATGACCCAACTAATCCAAATCAACCCAATCTAAATGTTTTATGATTTTGTTGGATTGGGTTCATTATTTAATAAGAATTATTTGAATTGAAGAAATTTATAATCGAACAATTGAATTGGTCTAAACAGTGTTTCAACCCAACCTAACCTAATCCAACCTACGAACACTCCTAATTTAAATAATCTTTGCATAATTGGATTCAACGATCATGGGATGGCTAGAGTTAGAAAACAGAATACGAATTTTTCCTCTGCTGTATATTTGCTGTACATTTGATAAAACCAATACAAGGCTTTAAATAGCCGTTGGAGAGAAAGAATAAAGAGATGAATGGAATAATTTAAATACAGGTGTATACTTTTGATTGGTTGAGTGTAAATATTCTTTCTAATCAATTACTCTTCTAGAAGGAAGGTGACTTGGCAGTGGTGCAATTGACTTGGAGG

mRNA sequence

CCTCTCCCGGTAACTTTATCAATTTATCTTTCTTTTTCCAATCCCTACCTTTTTTTTGCTTCTCTCATGGCGACCAATCTTGCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCTTCTGGAAAATCCGAACCTAATCGCCGGAAGGCCACCGCGCCAAAGTGGTGGTCCCCGATCTTCGGCTGGTCTTCCGAACCGGATTACGTCCTTTCTTCCGCCGCGGAACAGTCGGTTCTGAATGCCGAACCGGAGCTCGAAGGTGGAAGAACCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTTCTCCGAATGAAAACGCTGGAGAGCTCCACTTTCCATGACATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATCTACGAAGTTTGGCGCAGTGAGGTGACTTGGCAGTGGTGCAATTGACTTGGAGG

Coding sequence (CDS)

CCTCTCCCGGTAACTTTATCAATTTATCTTTCTTTTTCCAATCCCTACCTTTTTTTTGCTTCTCTCATGGCGACCAATCTTGCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCTTCTGGAAAATCCGAACCTAATCGCCGGAAGGCCACCGCGCCAAAGTGGTGGTCCCCGATCTTCGGCTGGTCTTCCGAACCGGATTACGTCCTTTCTTCCGCCGCGGAACAGTCGGTTCTGAATGCCGAACCGGAGCTCGAAGGTGGAAGAACCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTTCTCCGAATGAAAACGCTGGAGAGCTCCACTTTCCATGACATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAG

Protein sequence

PLPVTLSIYLSFSNPYLFFASLMATNLAVFHPAPIRASSSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAEQSVLNAEPELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSKK
Homology
[Close]
BLAST of Bhi09G000051 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 35  IRASS-SGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAEQSVLNAEPELEGGRTRSR 94
           IRASS SG   P++ +  +  WW+P+FG  S+PDY+   ++  +V   + ++ G  +  +
Sbjct: 13  IRASSGSGSLNPDQNRKKSAAWWAPLFGLPSDPDYLNIESSCSTVNPDKTDISG--SGQK 72

Query: 95  FAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDR 138
           F  GCFTEEKAK LR KT E+STFHD+MYHSAIASRLASD++ R
Sbjct: 73  FRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDITGR 114

[Close]
BLAST of Bhi09G000051 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-21
Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 0 

Query: 23  MATNLAVFHPAPIRASSSGKSEPNRRK-ATAPKWWSPIFGWSSEPDYVLSSAAEQSVLNA 82
           MAT ++    + IRASS  +S+P R+K  ++  WW+P+FG SSEPDYV         +N 
Sbjct: 1   MATIISCSALSSIRASS--ESDPARKKPVSSVSWWAPLFGMSSEPDYV------NKTVNL 60

Query: 83  EPELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDL 135
           E +L+    RS     C TEEKAK LR KT E+STFHD+MYHSAIASRLASD+
Sbjct: 61  ESDLDKAEKRSLRC--CLTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDV 103

[Close]
BLAST of Bhi09G000051 vs. ExPASy TrEMBL
Match: A0A6J1KTB2 (uncharacterized protein LOC111498038 OS=Cucurbita maxima OX=3661 GN=LOC111498038 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.0e-51
Identity = 103/118 (87.29%), Postives = 110/118 (93.22%), Query Frame = 0 

Query: 23  MATNLAVFHPAPIRASSSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAEQSVLNAE 82
           MATNL VFH APIRASSSGKSEPNRRKA APKWWSPIFGWSSEPDY+ SSAA+Q V NA+
Sbjct: 1   MATNLPVFHVAPIRASSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQPVQNAD 60

Query: 83  PELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSKK 141
           PEL+GGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSK+
Sbjct: 61  PELDGGRAKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSKE 118

[Close]
BLAST of Bhi09G000051 vs. ExPASy TrEMBL
Match: A0A6J1H6P9 (uncharacterized protein LOC111460952 OS=Cucurbita moschata OX=3662 GN=LOC111460952 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.0e-51
Identity = 103/118 (87.29%), Postives = 110/118 (93.22%), Query Frame = 0 

Query: 23  MATNLAVFHPAPIRASSSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAEQSVLNAE 82
           MATNL VFH APIRASSSGKSEPNRRKA APKWWSPIFGWSSEPDY+ SSAA+Q V NA+
Sbjct: 1   MATNLPVFHAAPIRASSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQPVQNAD 60

Query: 83  PELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSKK 141
           PEL+GGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSK+
Sbjct: 61  PELDGGRPKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRSKE 118

[Close]
BLAST of Bhi09G000051 vs. ExPASy TrEMBL
Match: A0A5D3CF29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002310 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50
Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0 

Query: 23  MATNLAVFHPAPIRAS---SSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAE-QSV 82
           MATN AVFHP PIRAS   SSGKS+PNRR A  PKWWSPIFGWSSEPDYV+SSAAE QSV
Sbjct: 1   MATNFAVFHPPPIRASSSASSGKSQPNRRNAAGPKWWSPIFGWSSEPDYVVSSAAEVQSV 60

Query: 83  LNAEPELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRS 141
            NA+PEL+GGRT SRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRS
Sbjct: 61  QNADPELDGGRTGSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRS 120

[Close]
BLAST of Bhi09G000051 vs. ExPASy TrEMBL
Match: A0A1S3CEC0 (uncharacterized protein LOC103499770 OS=Cucumis melo OX=3656 GN=LOC103499770 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50
Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0 

Query: 23  MATNLAVFHPAPIRAS---SSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAE-QSV 82
           MATN AVFHP PIRAS   SSGKS+PNRR A  PKWWSPIFGWSSEPDYV+SSAAE QSV
Sbjct: 1   MATNFAVFHPPPIRASSSASSGKSQPNRRNAAGPKWWSPIFGWSSEPDYVVSSAAEVQSV 60

Query: 83  LNAEPELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRS 141
            NA+PEL+GGRT SRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRS
Sbjct: 61  QNADPELDGGRTGSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDRS 120

[Close]
BLAST of Bhi09G000051 vs. ExPASy TrEMBL
Match: A0A0A0K8X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433380 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.0e-48
Identity = 104/126 (82.54%), Postives = 108/126 (85.71%), Query Frame = 0 

Query: 23  MATNLAVFHPAPIRA-------SSSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAE 82
           MATN AVFHPAPI A       SSSGK +PNR  A APKWWSPIFGWSSEPDYV+SSAAE
Sbjct: 1   MATNFAVFHPAPITASSSSSSSSSSGKYQPNRPNAAAPKWWSPIFGWSSEPDYVVSSAAE 60

Query: 83  -QSVLNAEPELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDL 141
            QS+ NA+PEL GGR RSRFAPGCFTEEKAKLLRMKT ESSTFHDIMYHSAIASRLASDL
Sbjct: 61  VQSIQNADPELHGGRIRSRFAPGCFTEEKAKLLRMKTRESSTFHDIMYHSAIASRLASDL 120

The following BLAST results are available for this feature:
BLAST of Bhi09G000051 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52720.12.9e-2250.96unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G15630.13.2e-2152.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
BLAST of Bhi09G000051 vs. TAIR 10
Match NameE-valueIdentityDescription
BLAST of Bhi09G000051 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KTB24.0e-5187.29uncharacterized protein LOC111498038 OS=Cucurbita maxima OX=3661 GN=LOC111498038... [more]
A0A6J1H6P94.0e-5187.29uncharacterized protein LOC111460952 OS=Cucurbita moschata OX=3662 GN=LOC1114609... [more]
A0A5D3CF292.0e-5087.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEC02.0e-5087.70uncharacterized protein LOC103499770 OS=Cucumis melo OX=3656 GN=LOC103499770 PE=... [more]
A0A0A0K8X07.0e-4882.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433380 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34198OS01G0175100 PROTEINcoord: 23..140
NoneNo IPR availablePANTHERPTHR34198:SF12BNAA05G35680D PROTEINcoord: 23..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000051Bhi09M000051mRNA