Bhi08G001477 (gene) Wax gourd (B227) v1

Overview
NameBhi08G001477
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr8: 52378227 .. 52380591 (-)
RNA-Seq ExpressionBhi08G001477
SyntenyBhi08G001477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGCTTCGTAGTTGGGGATAACCAGTGAAGGTTTGGGCATTTGTCCATTTCCCATCTGATCAAAGAATTGAGAGGTGAAGGACCAAGCGAGTGAGAGAGAAATGGAGGGAAGGGGAATTATGAGTCCCAAAAGATCCCGATTTTCTCCGAAAATGACCAAAAAGGGTACTCCACAGCCAGCAAAACCAGCCAAGAACAAACATCCCAGAAATGTTACTGGATCCAAAATAGAAGTCACTCCAATTCCAAACCCAACGCCACCAAGGGCAGCCACAAATCCTAGTCCAAACCACAGCAAAACTCAGTCCAGATCGGAACCATCGTCCCCGATTCCACCTCCAACTCCAACTCCGACGACAAGAAGTCAACCCACCACCCCTTCTTCTTCAAATACCAATGTTGTAAGACAAGGTGGACTCTCCTTTGATAACCCTTCTGTTTCAAAATCCTTTCATTCTCCAAAAGATTATCACAAAAGTTCTCCGGGCTCTTGGTTGGGTCTTCAGAAAGATGTCAACACTAGTCCTGATCCTTCTTCCCCTGCTTCTTCTCATACTGCTTCTGATCTTAGTGATCGCTTGTTACAACGCCTTTCTTTTGACGGTCAGCTTTCGTATTACTTCACACCTTTTTTTTTTTTCTTTTGTAAAATTTTCATCCTACACTCATGAATCTCAACTCCATCCAAACATTTGTAAACTATTATAGGTTTCAAATTCAAGTACTATATATAAATATATATACTTAAAAGGCTGTCAGATGGTATACCATTAAATTTACCTTCACCTATAAATTTAAGTTTTTGGGTCAACTGGTGGTTTAATATGATAACAGATCAAGTAGTCCAAGAGATGTTGTGTTTCCACTTGTTGGGTCTTCTTTATATTTCAAGCCCACAAGTGAAAAGGTATTAGATGATATATAATATTAAATTTACTTCACGTATAAAAAGTTTTTATATCAATTGGTGATTTAAGAACCTTCTATACATTTAGGGTGGAATCAAAATTTGGTGAAAATTGAGGAACATTTTTATTTTAAAATTATAAATAAAAATATAAGCTTAATTAAATTACAAGTTAACTTGGCACTCCATCAATTTAATCAATGAAATTTTTATTTTATTTTTTAAATTTACATACCTACTGGAAACAAAATCACTTAAATCTAGTTTAAATGTTGTTAATTTAAACTTTTGTTTATCTGTAATAGATCGCGATGGATGAAATTTTGCTATATCATATAAATATTTTATTTATTTTGTTATACTTAAAAATAACCCTTATAACAACTTAGTTATACTTATTGATTAGGCTTATTCAACCTTGCTTTTTTAGTTTAGTTGTGATATGTATATATATCTTCAAGCTATATGATCTAGTTTTGTTGATATTTTCTTTGAGTGGTTATAGATTTGGTTGAAATAATCTAGTACTCTTTCTAAAAGAAATCACATGTGTAGGTAAAGATGTTGCGGACATCCTTCAAGGAAAGTCAATATATGATATAATGGGCTCAAATAAAAAGGAAGAAACATCTCAAAGCATTGATGGTTTGAGAGTACTTCAAATTTACAAGGAAATTGCATCTCATCGCCAAGAAAACTTATTCGTTGAACCTTACTTCAGAAAGCTCAATGCATTATGGGATGAACTCTCATTCTATATTACTGATTTGGCTCAATGTTCCAGCGGCGGTGCAATTCAAAATGTTAGTGAGCTTACGGAGAGACAAAAGGTTGTGCAATTTCTTGTGGGATTAAATGATTCTTATGCCACAATTTGCGGCCAAATCCTTGTTAAGAGGCCATTTCCGACGGTGGAGGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGCTGCATTAGAAACTGTGGCTGCAAAAGTAATCCAAAGCAATTGGCTTCTTAAAAATCAAAATAGTCGATCCAATAATAATCGTGGTATTGATCAAGAAGTTGATAATGCTAACCTTGGATCTCCTATGTGAAGTTGAAGATTTTCAGCTCAATGAAAATTCAGGGTTAATGTTTTATTTATTTTTTTATTTAAATTCCTTTTCCTTTCGGTCTTATTCATATGAATATTCTTTGCTTTTGCATCCTTAATATGTTTCATAATTGCTATTGAATTGCACTGTTCTGACACATTTTTTTTTTTTTTTTTTTTGTGTTTTCTCCATGAAGGTAAACTAGTCCAAACTATTGATCATCATGGTGAGACTTCACGAGGAAAATGTGTTACCTCTACAATGGTCGAGTCAGATAATGTATTTTACTTCTTCATTATGTGTGGCTTGTTTCAAGTGAATAAGAGTATTAATGTGACTCATTTATTCGAGCCCTTCTTG

mRNA sequence

CAAGCTTCGTAGTTGGGGATAACCAGTGAAGGTTTGGGCATTTGTCCATTTCCCATCTGATCAAAGAATTGAGAGGTGAAGGACCAAGCGAGTGAGAGAGAAATGGAGGGAAGGGGAATTATGAGTCCCAAAAGATCCCGATTTTCTCCGAAAATGACCAAAAAGGGTACTCCACAGCCAGCAAAACCAGCCAAGAACAAACATCCCAGAAATGTTACTGGATCCAAAATAGAAGTCACTCCAATTCCAAACCCAACGCCACCAAGGGCAGCCACAAATCCTAGTCCAAACCACAGCAAAACTCAGTCCAGATCGGAACCATCGTCCCCGATTCCACCTCCAACTCCAACTCCGACGACAAGAAGTCAACCCACCACCCCTTCTTCTTCAAATACCAATGTTGTAAGACAAGGTGGACTCTCCTTTGATAACCCTTCTGTTTCAAAATCCTTTCATTCTCCAAAAGATTATCACAAAAGTTCTCCGGGCTCTTGGTTGGGTCTTCAGAAAGATGTCAACACTAGTCCTGATCCTTCTTCCCCTGCTTCTTCTCATACTGCTTCTGATCTTAGTGATCGCTTGTTACAACGCCTTTCTTTTGACGGTAAAGATGTTGCGGACATCCTTCAAGGAAAGTCAATATATGATATAATGGGCTCAAATAAAAAGGAAGAAACATCTCAAAGCATTGATGGTTTGAGAGTACTTCAAATTTACAAGGAAATTGCATCTCATCGCCAAGAAAACTTATTCGTTGAACCTTACTTCAGAAAGCTCAATGCATTATGGGATGAACTCTCATTCTATATTACTGATTTGGCTCAATGTTCCAGCGGCGGTGCAATTCAAAATGTTAGTGAGCTTACGGAGAGACAAAAGGTTGTGCAATTTCTTGTGGGATTAAATGATTCTTATGCCACAATTTGCGGCCAAATCCTTGTTAAGAGGCCATTTCCGACGGTGGAGGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGCTGCATTAGAAACTGTGGCTGCAAAAGTAATCCAAAGCAATTGGCTTCTTAAAAATCAAAATAGTCGATCCAATAATAATCGTGGTATTGATCAAGAAGTTGATAATGCTAACCTTGGATCTCCTATGTGAAGTTGAAGATTTTCAGCTCAATGAAAATTCAGGGTAAACTAGTCCAAACTATTGATCATCATGGTGAGACTTCACGAGGAAAATGTGTTACCTCTACAATGGTCGAGTCAGATAATGTATTTTACTTCTTCATTATGTGTGGCTTGTTTCAAGTGAATAAGAGTATTAATGTGACTCATTTATTCGAGCCCTTCTTG

Coding sequence (CDS)

ATGGAGGGAAGGGGAATTATGAGTCCCAAAAGATCCCGATTTTCTCCGAAAATGACCAAAAAGGGTACTCCACAGCCAGCAAAACCAGCCAAGAACAAACATCCCAGAAATGTTACTGGATCCAAAATAGAAGTCACTCCAATTCCAAACCCAACGCCACCAAGGGCAGCCACAAATCCTAGTCCAAACCACAGCAAAACTCAGTCCAGATCGGAACCATCGTCCCCGATTCCACCTCCAACTCCAACTCCGACGACAAGAAGTCAACCCACCACCCCTTCTTCTTCAAATACCAATGTTGTAAGACAAGGTGGACTCTCCTTTGATAACCCTTCTGTTTCAAAATCCTTTCATTCTCCAAAAGATTATCACAAAAGTTCTCCGGGCTCTTGGTTGGGTCTTCAGAAAGATGTCAACACTAGTCCTGATCCTTCTTCCCCTGCTTCTTCTCATACTGCTTCTGATCTTAGTGATCGCTTGTTACAACGCCTTTCTTTTGACGGTAAAGATGTTGCGGACATCCTTCAAGGAAAGTCAATATATGATATAATGGGCTCAAATAAAAAGGAAGAAACATCTCAAAGCATTGATGGTTTGAGAGTACTTCAAATTTACAAGGAAATTGCATCTCATCGCCAAGAAAACTTATTCGTTGAACCTTACTTCAGAAAGCTCAATGCATTATGGGATGAACTCTCATTCTATATTACTGATTTGGCTCAATGTTCCAGCGGCGGTGCAATTCAAAATGTTAGTGAGCTTACGGAGAGACAAAAGGTTGTGCAATTTCTTGTGGGATTAAATGATTCTTATGCCACAATTTGCGGCCAAATCCTTGTTAAGAGGCCATTTCCGACGGTGGAGGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGCTGCATTAGAAACTGTGGCTGCAAAAGTAATCCAAAGCAATTGGCTTCTTAAAAATCAAAATAGTCGATCCAATAATAATCGTGGTATTGATCAAGAAGTTGATAATGCTAACCTTGGATCTCCTATGTGA

Protein sequence

MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPRNVTGSKIEVTPIPNPTPPRAATNPSPNHSKTQSRSEPSSPIPPPTPTPTTRSQPTTPSSSNTNVVRQGGLSFDNPSVSKSFHSPKDYHKSSPGSWLGLQKDVNTSPDPSSPASSHTASDLSDRLLQRLSFDGKDVADILQGKSIYDIMGSNKKEETSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDELSFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYSEIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRSNNNRGIDQEVDNANLGSPM
Homology
BLAST of Bhi08G001477 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-08
Identity = 31/102 (30.39%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 199 LRVLQIYKEIASHRQENLFVEPYFRKLNALWDELSFYITDLAQCSSGG----AIQNVSEL 258
           L++ Q+ + +A+ RQ    VE YF KL+ +W ELS Y   + +C  GG      +   E 
Sbjct: 125 LKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEY-APIPECKCGGCNCECTKRAEEA 184

Query: 259 TERQKVVQFLVG--LNDSYATICGQILVKRPFPTVEEAYSEI 295
            E+++  +FL+G  LN  +  +  +I+ ++P P++ EA++ +
Sbjct: 185 REKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMV 225

BLAST of Bhi08G001477 vs. ExPASy TrEMBL
Match: A0A0A0LRE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.2e-65
Identity = 175/367 (47.68%), Postives = 226/367 (61.58%), Query Frame = 0

Query: 1   MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPR---NVTGSKIEVTPIPNPTPPRAA 60
           M+ RGIM PKRS+FSPK  +K     AK +  K+P+   N   S         P P  AA
Sbjct: 1   MDERGIMGPKRSQFSPKPNRKPIDPEAKKSAKKNPKKDPNFPSSS-------KPKPQAAA 60

Query: 61  TNPSPNHSKTQSRSE--PSSPIPPPTP--TPTTRSQPTTPSSS-------NTNVVRQGGL 120
           TNP+ N +KT   SE   S+P PPPTP  TP  +SQP TPSS        N +  R+   
Sbjct: 61  TNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPRRSKS 120

Query: 121 SFDNPSVSKSF---------HSPKDYHKSSPGSWLG-LQKDVNTSPDPSSPASSHTASDL 180
               PS +            +S K + K+SP S     QK V T+ DP SP  S ++ D+
Sbjct: 121 QPATPSSASKINFVRRIDNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPGYSDSSHDI 180

Query: 181 SDRLLQRLSFDGKDVADILQGKSIYDIMGSN--KKEETSQSIDGLRVLQIYKEIASHRQE 240
            DRLLQRLS +GKD+ DIL+G +I D+MGSN  K+E +S+++  L +LQIY++IASHRQ 
Sbjct: 181 GDRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQKIASHRQG 240

Query: 241 NLFVEPYFRKLNALWDELSFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATI 300
           NL VE YF+KL  LW+++  Y ++  +      I   SELTER KV+QF +GLND Y+ I
Sbjct: 241 NLSVERYFKKLKKLWNDIGIYSSESVE-----GIAFWSELTERDKVIQFFIGLNDYYSII 300

Query: 301 CGQILVKRPFPTVEEAYSEIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRSNNNRGI 342
           C QILV +PFPTVEEAYSEII EEKRREL  AL TVAA+VIQS++   + N+  N N GI
Sbjct: 301 CSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSYQNGSSNNGDNKNLGI 355

BLAST of Bhi08G001477 vs. ExPASy TrEMBL
Match: A0A0A0LU31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.3e-62
Identity = 180/372 (48.39%), Postives = 222/372 (59.68%), Query Frame = 0

Query: 4   RGIMSP--------KRSRFSPKMTKKGTPQPAKPAKNKHPR---NVTGSKIEVTPIPNPT 63
           RGI  P        ++   SP  TKK T    K + NKHP    N   S         P 
Sbjct: 12  RGIFDPHFKSPVNRRKINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSS-------KPK 71

Query: 64  PPRAATNPSPNHSKTQSRSEPSSPIPPPTPTPTTR---SQPTTPS-------SSNTNVVR 123
           P  AA N +PN     S S PSSP PPPTP PTTR   SQP TPS       S   +  R
Sbjct: 72  PQAAARNSNPN-----SNSAPSSPAPPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTR 131

Query: 124 QGGLSFDNPSVSK---------SFHSPKDYHKSSPGSWLGL-QKDVNTSPDPSSPASSHT 183
           +       PS S          + +SPK   K SP S     +K V T+  P+SPASS  
Sbjct: 132 KTKCQPTMPSSSSKNNVVRRIYNDNSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDP 191

Query: 184 ASDLSDRLLQRLSFDGKDVADILQGKSIYDIMGS-NKKEETS-QSIDGLRVLQIYKEIAS 243
           ++D+  RLLQ LSF+GKD+ DIL+G SI D+MGS NKKEE+S +++  L +LQIY++IAS
Sbjct: 192 SNDIGHRLLQGLSFEGKDLDDILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIAS 251

Query: 244 HRQENLFVEPYFRKLNALWDELSFYITDLAQ-CSSGGAIQNVSELTERQKVVQFLVGLND 303
           HRQ NL VE YF+KL  LW+++  Y +D AQ  SS G I   SELTER KV+QF +GLND
Sbjct: 252 HRQGNLSVERYFKKLKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLND 311

Query: 304 SYATICGQILVKRPFPTVEEAYSEIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRSN 342
            Y+ IC QILV +PFPTVEEAYSEII EEKRREL  AL  +AA+VIQS++   + N+  N
Sbjct: 312 YYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGIMAAQVIQSSYQYGSSNNGDN 371

BLAST of Bhi08G001477 vs. ExPASy TrEMBL
Match: A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.5e-46
Identity = 158/390 (40.51%), Postives = 212/390 (54.36%), Query Frame = 0

Query: 4   RGIMSPKRSRFSPKMTK---KGTPQ-PAKP-----------AKNKH-----------PRN 63
           RG++SP RSR SP+  +    G P  P++P           A+ +H            R 
Sbjct: 50  RGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRA 109

Query: 64  VTGSKIEVTPIPNPTPPRA-ATNPSPNHSKTQSR-----------SEPSSP--------- 123
              S   + P P PT P   +  P+PN    Q +           ++PSSP         
Sbjct: 110 TKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQPQRLRN 169

Query: 124 --IPPPTPTPTTRSQPTTPSSSNTNVVRQGGLSFDNPSVSKSFHSPKDYHKSSPGSWLGL 183
              PP  PTP +++  TTP       +     S D+P+ +    SP   H  SPGS    
Sbjct: 170 GVEPPRGPTPISKN--TTPKPKPAIAIASASRS-DSPAANS---SPSSKHLPSPGS--AQ 229

Query: 184 QKDVNTSPDPSSPASSHTASDLSD----RLLQRLSFDGKDVAD-ILQGKSIYDIMGSNKK 243
             D+       SP S  T + L+D      LQRLS DGKD+A  IL   SIY+ +GS+  
Sbjct: 230 HHDMKN----HSPYSGGTYTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTM 289

Query: 244 EETSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDELSFYITDLAQCSSGGAIQ 303
           EE+ QS +  R+ QIYK+IASHRQEN  V  YF KL  LWDEL  Y  D+ QC S GA++
Sbjct: 290 EESFQS-NAPRIFQIYKDIASHRQENSSVTSYFTKLKILWDELETYSDDVPQCCSCGAME 349

Query: 304 NVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYSEIIGEEKRRELVAALET 340
            +S   ER+KV+QFL+GLN+SY+TIC QIL+ +PFPT+E+AYS II EEKR ELV +LE 
Sbjct: 350 KLSGHVEREKVMQFLMGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEM 409

BLAST of Bhi08G001477 vs. ExPASy TrEMBL
Match: A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-40
Identity = 147/351 (41.88%), Postives = 195/351 (55.56%), Query Frame = 0

Query: 7   MSPKRSRFSP-----KMTKKGTPQPAKPAKNKHPRNVTGSKIEVTPI-PNP--TPPRAAT 66
           MSP+R   +P       T +  PQP    +   P + + +   + P  PN    P R A 
Sbjct: 36  MSPRRRPTTPINPNELRTHRKEPQPTVVKRPTKPTDRSSNPPRIDPSRPNSKLAPSRPAA 95

Query: 67  NPSPNHSKTQSRSEPSSPIPPPTPTPTTRSQPTTPSSSNTNVVRQGGLSFDNPSVSKSFH 126
            PSPN  K  +++ P +     +P PT   +P TP S +      G  S  + S +K   
Sbjct: 96  -PSPNERKLDTKTAPKTTTRFSSPRPT---KPITPPSKSNGKGASGSGSRSDFSRAKPSD 155

Query: 127 SPKDYHKSSPGSWLGLQKD---VNTSPDPSSPASSHTASDLSDRLLQRLSFDGKDVADI- 186
           S K   K+     L  Q+D   V +  D S  A   T SD     L +LS D KD+A+I 
Sbjct: 156 SQKGTPKNLRSGRLNDQQDEQIVRSYSDGSYGA--RTLSDPDVHKLHQLSLDDKDLANIV 215

Query: 187 LQGKSIYDIMGSNKKEE--TSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDEL 246
           L    +Y+ + S  KEE  +SQ  +  R+ QIYKEIASH Q N  +  Y  KL ALWDEL
Sbjct: 216 LHANLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDEL 275

Query: 247 SFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYS 306
             YI D  +CS  G+ +  SE  ER+KV+QFL+GLNDSY+TIC QIL  +PFPTVE+A  
Sbjct: 276 EAYI-DTPKCSC-GSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACC 335

Query: 307 EIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRSNNNRGIDQEVDNANL 344
            I+ EEKRRELV +LE VAAKVIQ+NWLL+N +S + +N    +EVD+ NL
Sbjct: 336 AILREEKRRELVLSLEIVAAKVIQNNWLLQNGHSINGDN----EEVDHMNL 374

BLAST of Bhi08G001477 vs. ExPASy TrEMBL
Match: A0A6J1C7L7 (uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008986 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-26
Identity = 116/316 (36.71%), Postives = 162/316 (51.27%), Query Frame = 0

Query: 1   MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPRNVTGSKIEVTPIPNPTPPRAATNP 60
           M GRG++SP +SRFS   +       A P    +  + T  +     + NP   +  T+ 
Sbjct: 4   MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSAT-RRSTAARVVNP-KQQQTTHT 63

Query: 61  SPNHSKTQSRSEPSSPIPPPTPTPTTRSQPT----TPSSSNTNVVRQGGLSFDNPSVSKS 120
            P       R+  +S  P PTP   +R +PT     P+  N N   +  ++    S + +
Sbjct: 64  KPTFGSNAIRATKNSS-PKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTIAKITTSRNSN 123

Query: 121 FHSPKDYHK----------SSPGSWLGLQKDVNTSPDPSSPASSHTASDLSDRL--LQRL 180
            +  +   +          SS GS  G  +D N +        S T       +  LQ+L
Sbjct: 124 VNGVQQQPRGPTLISVASGSSHGS--GHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQL 183

Query: 181 SFDGKDVAD-ILQGKSIYDIMGSNKKEETSQSIDGLRVLQIYKEIASHRQENLFVEPYFR 240
           S DGK  A  + +  S+ + +G   KEE S   +  R+L+IYK+IASHRQ N  +  YF 
Sbjct: 184 SIDGKHHAKMVFRANSMDESVGPYTKEECSPQSNAERILEIYKDIASHRQGNSSITSYFT 243

Query: 241 KLNALWDELSFYITDLAQCSSGGAI-QNVSELTERQKVVQFLVGLNDSYATICGQILVKR 299
           KL  LW+EL  Y +DL QC S  A  Q  S+L ER+KV+QFLVGLNDSY+TIC QIL+ R
Sbjct: 244 KLETLWEELETY-SDLPQCCSYSATDQKPSKLVEREKVMQFLVGLNDSYSTICSQILLIR 303

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G21280.16.0e-0830.39CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LRE69.2e-6547.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1[more]
A0A0A0LU317.3e-6248.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1[more]
A0A6J1C5Z89.5e-4640.51uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1GTG42.7e-4041.88serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1C7L74.9e-2636.71uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..87
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 191..324
NoneNo IPR availablePANTHERPTHR34222:SF6OS02G0671800 PROTEINcoord: 191..324

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001477Bhi08M001477mRNA