Bhi07G001543 (gene) Wax gourd (B227) v1

Overview
NameBhi07G001543
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCytochrome oxidase assembly protein
Locationchr7: 51780581 .. 51782948 (-)
RNA-Seq ExpressionBhi07G001543
SyntenyBhi07G001543
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAAGGCGGCCCAATAGCTTCAAGCTGCAAATTTCAAAACCTTCCAGCTCAGACCGATTGTGGTCATCCGAATCTGCACGTCAGGACTCTCAGGCGACAGTCGAGCAAATCCAGTAGAAGCGACGCCATTAGGGTTTTGCCTTTCATCCTAATCCTCGAGGTTTGAAGATTACTTTGTCCGGATTGATTCATGATAACCTGTTAAATGATGCGTTAAGATATTTGTAAATTCTTTTCTGCTTTGTAATTTCTCGACGAAAAGATTACTATGTTCTTCTAAGCACGGGGTCGATCAGAACTTCGATTTTTTCTTTATGGTTTGCTAACTTGTCTGATCATGGCGTAGAGTTTAGTTTCTTTCATCAATGTCTGAATTTTTATTATTTATTATTGATGGTAAAGAAAACTCAGGAAATGTAAACGCTAGCTAGTTTTATGCCGAGTTGAACCAACCTACTTGGCGCTTGTCGTTTGCACTTGTATTTTAAGACCAGTGTGATAACCATTTAGTTTTTGACTTTTGGTTCATGAAAAATTAAGCCAATTTCCTCTGAATTTCTTACCATGTTTGCATCTTTCTTAATTTAAAGAAGCAAAAACAAGTTTTTAAAACTACTTTTTTTGGTTTTCTTTACTGGCTTTTTTTTTTTTTTTCTTTTTTTTGAAACATTGGTAAAAAGTAGATGATAAACTAAGAACAAAAAATCAAATAGTTACCAAATGAGCCTTAAGAAATTTGCTGTTACAATAATGTATTAATATTTAATATCACACAATGAAGCAACAATTGTAATCTGTGAATCTGATACCCAGTATAACTGTGGGTGGTCAACGTTTTAATGCAAGAAACCCTTTGTAAGAACCACCTTATTTGAACAGTATCGATAGAAATAGGTGGGTTGCATATTGGTTCCCTAGAGCTCTAAGATACCCATAGTTAGAAGCAAAATACATGCCATATCAAACAAAGTCTTAGATGCTTCCCCATGAAGTTTTTGCACAAGAGTTTGATCATTTGTCGAACCCAATCCTGGTGCCTGGTTCATATGGACTATGCAGTATCCAATTTTTAGTGCCAACCAGTTGGCAAGAGCAACAGTAAGAACCATCCTAGTGGTACTAGCTTGGAGTACGATATTGAAGGTCTGACAATGATCAACATCCAGTGATTAAAAATCTTATCTATTAACTTGACCTTTTAATGAGCTTCTGCCCCATCTGGATATCTCTTCATTTTAAATATCCGTTTACACCTTGCAACCTTAGATGAGAAGCTTGGTTGGCAATAACTTGGACGGCAACAAATTTCTCAGGAAGTTACCTATATCCATAGATATACCATTCGCTGTGGAATCCATTTAGTCTCCCAGGGTTTTGTGCTTCCCGACGATTTATAACCATTCTGTTTCTTGAGGTACCCATGCCTACTCTTTCCTTCACTCGTACATTTAATCCTCTGCTACCATCTTAAGAAAGCAGATATATTGATGGAAAGATCACTCGTAACCATTTTGTTTTTTGTATACTCGTAATTTATTGGGCTTTACATGATAGACCCAAGTATTGCCTAATGGTCTAACAAATTAGAACTTAATGAAATATAACCAGCTAATTGTGTCTACTACAACTAAACAGAACCAGATGAACAGATATTCCAAACAAAACCATCTAAAGTCATTTATATTTCAGTGGCGTTCTTGGAGATGTCTCATTTTCTCCTTTTGTATAACTTGATTAAGTGTGGATCGAATTTTTTCGTTTAGCTTCTTCTAACAAGCCCTCGATTTTCATTTCTATCAATCCATTATTGATCTTTGCAAGACTTGTTCCTTGGGTGAAAACCATTATAGGCCATTGGATAGTATTATAACTGGTTTAATATTGTTAAGTTTGCAGCATTACAGCGGTGTCTTTGCTTGCTAAATGGCTGGACTTTTGGGATATAGGGGCCTTGGACCCAAGACAAAGAATATTGTTGTTGCTGGAGGTTTAACTGCCTTCGTTTTCGGGGTATATTTCTACACAATGAGAGCTGTTGGAGGTTCAGATGAACTTCAAGTAGCCATAGACCAATTTGAAGCACAGAAAAGCGACAAGGATTCAAATGCGTAACCTTGAAATGAGCTTTTTTTTCCATGGATATTCTTGAGACTACAACAATGAGGAAGCCATTGAAAGAGGAGGAAAATGACCACCGAGTTTTGACTCTTTTTTACCGCCCTTATAAATCTGGGAAAATAACGAATTCCTGGGCCTTCATAAACAACAATAATGTGTTTTCCATGAACTCTAAGTAGAAATATTATGTGGGGTTGCTCAGCTAGTTTTTCCATTTTGGGAGTTCAAATGTTATGTACTTTGACAAT

mRNA sequence

ATTAAAGGCGGCCCAATAGCTTCAAGCTGCAAATTTCAAAACCTTCCAGCTCAGACCGATTGTGGTCATCCGAATCTGCACGTCAGGACTCTCAGGCGACAGTCGAGCAAATCCAGTAGAAGCGACGCCATTAGGGTTTTGCCTTTCATCCTAATCCTCGAGCATTACAGCGGTGTCTTTGCTTGCTAAATGGCTGGACTTTTGGGATATAGGGGCCTTGGACCCAAGACAAAGAATATTGTTGTTGCTGGAGGTTTAACTGCCTTCGTTTTCGGGGTATATTTCTACACAATGAGAGCTGTTGGAGGTTCAGATGAACTTCAAGTAGCCATAGACCAATTTGAAGCACAGAAAAGCGACAAGGATTCAAATGCGTAACCTTGAAATGAGCTTTTTTTTCCATGGATATTCTTGAGACTACAACAATGAGGAAGCCATTGAAAGAGGAGGAAAATGACCACCGAGTTTTGACTCTTTTTTACCGCCCTTATAAATCTGGGAAAATAACGAATTCCTGGGCCTTCATAAACAACAATAATGTGTTTTCCATGAACTCTAAGTAGAAATATTATGTGGGGTTGCTCAGCTAGTTTTTCCATTTTGGGAGTTCAAATGTTATGTACTTTGACAAT

Coding sequence (CDS)

ATGGCTGGACTTTTGGGATATAGGGGCCTTGGACCCAAGACAAAGAATATTGTTGTTGCTGGAGGTTTAACTGCCTTCGTTTTCGGGGTATATTTCTACACAATGAGAGCTGTTGGAGGTTCAGATGAACTTCAAGTAGCCATAGACCAATTTGAAGCACAGAAAAGCGACAAGGATTCAAATGCGTAA

Protein sequence

MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKDSNA
Homology
[Close]
BLAST of Bhi07G001543 vs. TAIR 10
Match: AT2G43780.1 (unknown protein; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 6.7e-19
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK 56
          MAG  G+  LGPK KN VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FE QK
Sbjct: 1  MAGFPGFSYLGPKGKNTVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKFEGQK 55

[Close]
BLAST of Bhi07G001543 vs. TAIR 10
Match: AT2G43780.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 6.7e-19
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK 56
          MAG  G+  LGPK KN VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FE QK
Sbjct: 1  MAGFPGFSYLGPKGKNTVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKFEGQK 55

[Close]
BLAST of Bhi07G001543 vs. ExPASy TrEMBL
Match: A0A5A7SUP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002370 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKDS 60
          MAGLLGY GLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAID+FEAQKS+K+S
Sbjct: 1  MAGLLGYSGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDKFEAQKSNKES 60

Query: 61 N 62
          N
Sbjct: 61 N 61

[Close]
BLAST of Bhi07G001543 vs. ExPASy TrEMBL
Match: A0A1S4DW05 (uncharacterized protein LOC103488878 OS=Cucumis melo OX=3656 GN=LOC103488878 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKDS 60
          MAGLLGY GLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAID+FEAQKS+K+S
Sbjct: 1  MAGLLGYSGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDKFEAQKSNKES 60

Query: 61 N 62
          N
Sbjct: 61 N 61

[Close]
BLAST of Bhi07G001543 vs. ExPASy TrEMBL
Match: A0A6J1KHY0 (uncharacterized protein LOC111493381 OS=Cucurbita maxima OX=3661 GN=LOC111493381 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.5e-22
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKDS 60
          MAGLLG RGL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK +KDS
Sbjct: 1  MAGLLGLRGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDS 60

Query: 61 N 62
          N
Sbjct: 61 N 61

[Close]
BLAST of Bhi07G001543 vs. ExPASy TrEMBL
Match: A0A6J1GXM1 (uncharacterized protein LOC111458133 OS=Cucurbita moschata OX=3662 GN=LOC111458133 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.5e-22
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKDS 60
          MAGLLG RGL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK +KDS
Sbjct: 1  MAGLLGLRGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDS 60

Query: 61 N 62
          N
Sbjct: 61 N 61

[Close]
BLAST of Bhi07G001543 vs. ExPASy TrEMBL
Match: A0A0A0KPU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589280 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKDS 60
          MAGLLG+ GLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFE+QK +K+S
Sbjct: 1  MAGLLGFSGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFESQKRNKES 60

Query: 61 N 62
          N
Sbjct: 61 N 61

The following BLAST results are available for this feature:
BLAST of Bhi07G001543 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43780.16.7e-1981.82unknown protein; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bac... [more]
AT2G43780.26.7e-1981.82unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
BLAST of Bhi07G001543 vs. TAIR 10
Match NameE-valueIdentityDescription
BLAST of Bhi07G001543 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SUP42.9e-2293.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DW052.9e-2293.44uncharacterized protein LOC103488878 OS=Cucumis melo OX=3656 GN=LOC103488878 PE=... [more]
A0A6J1KHY08.5e-2293.44uncharacterized protein LOC111493381 OS=Cucurbita maxima OX=3661 GN=LOC111493381... [more]
A0A6J1GXM18.5e-2293.44uncharacterized protein LOC111458133 OS=Cucurbita moschata OX=3662 GN=LOC1114581... [more]
A0A0A0KPU82.5e-2190.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589280 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36744CYTOCHROME OXIDASE ASSEMBLY PROTEINcoord: 1..61
NoneNo IPR availablePANTHERPTHR36744:SF2CYTOCHROME OXIDASE ASSEMBLY PROTEINcoord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M001543Bhi07M001543mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane