Bhi07G000234 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000234
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	heavy metal-associated isoprenylated plant protein 3-like
Location	chr7: 12669208 .. 12669414 (-)
RNA-Seq Expression	Bhi07G000234
Synteny	Bhi07G000234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGTGAAAGCTGAGATTGATGGCAACAAATTGACAGTAACGGGGAAGAAAATAGACGCAACGAAACTCCGTGAGAAACTTTCAAATAAGACGAAGAAGAAAGTGGATTTGATTTCACCACAGCCCAAGAAGGAAAAGGACTCGAAGCTCGAAGATAAGATCGACGATGACCAGACTTCTTCTAATAACAAAAAATCCGACAAGTAA

mRNA sequence

TCTGTGAAAGCTGAGATTGATGGCAACAAATTGACAGTAACGGGGAAGAAAATAGACGCAACGAAACTCCGTGAGAAACTTTCAAATAAGACGAAGAAGAAAGTGGATTTGATTTCACCACAGCCCAAGAAGGAAAAGGACTCGAAGCTCGAAGATAAGATCGACGATGACCAGACTTCTTCTAATAACAAAAAATCCGACAAGTAA

Coding sequence (CDS)

TCTGTGAAAGCTGAGATTGATGGCAACAAATTGACAGTAACGGGGAAGAAAATAGACGCAACGAAACTCCGTGAGAAACTTTCAAATAAGACGAAGAAGAAAGTGGATTTGATTTCACCACAGCCCAAGAAGGAAAAGGACTCGAAGCTCGAAGATAAGATCGACGATGACCAGACTTCTTCTAATAACAAAAAATCCGACAAGTAA

Protein sequence

SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTSSNNKKSDK

Homology

[Close]

BLAST of Bhi07G000234 vs. TAIR 10
Match: AT5G60800.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-09
Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           +VK+E    KLTVTG  +D  KLREKL  KTKKKVDL+SPQPKKEK+ + ++K D+D+  
Sbjct: 55  TVKSESATGKLTVTG-ALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKNKNDEDKKK 114

Query: 61  SNNKK 66
           S  KK
Sbjct: 115 SEEKK 118

[Close]

BLAST of Bhi07G000234 vs. TAIR 10
Match: AT5G60800.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-09
Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           +VK+E    KLTVTG  +D  KLREKL  KTKKKVDL+SPQPKKEK+ + ++K D+D+  
Sbjct: 55  TVKSESATGKLTVTG-ALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKNKNDEDKKK 114

Query: 61  SNNKK 66
           S  KK
Sbjct: 115 SEEKK 118

[Close]

BLAST of Bhi07G000234 vs. TAIR 10
Match: AT2G28090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 5.4e-06
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDD 57
           +V+A+ D NKLT+ G  +D  K+ EKL  K+KKKV+LISP+PKK+     E K +D
Sbjct: 58  TVRADPDSNKLTLIGFIMDPVKIAEKLQKKSKKKVELISPKPKKDTKENNEKKAND 113

[Close]

BLAST of Bhi07G000234 vs. TAIR 10
Match: AT2G36950.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 41.2 bits (95), Expect = 3.9e-04
Identity = 26/44 (59.09%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 2   VKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKE 46
           V A+  GNKL V G KID  KL+EKL  KTK+KV L +P PK E
Sbjct: 80  VTADTGGNKLLVVG-KIDPVKLQEKLEEKTKRKVVLANPPPKVE 122

[Close]

BLAST of Bhi07G000234 vs. ExPASy Swiss-Prot
Match: Q9FJH5 (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=HIPP03 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-08
Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           +VK+E    KLTVTG  +D  KLREKL  KTKKKVDL+SPQPKKEK+ + ++K D+D+  
Sbjct: 55  TVKSESATGKLTVTG-ALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKNKNDEDKKK 114

Query: 61  SNNKK 66
           S  KK
Sbjct: 115 SEEKK 118

[Close]

BLAST of Bhi07G000234 vs. ExPASy Swiss-Prot
Match: Q9ZUV1 (Heavy metal-associated isoprenylated plant protein 1 OS=Arabidopsis thaliana OX=3702 GN=HIPP01 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.6e-05
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDD 57
           +V+A+ D NKLT+ G  +D  K+ EKL  K+KKKV+LISP+PKK+     E K +D
Sbjct: 58  TVRADPDSNKLTLIGFIMDPVKIAEKLQKKSKKKVELISPKPKKDTKENNEKKAND 113

[Close]

BLAST of Bhi07G000234 vs. ExPASy TrEMBL
Match: A0A0A0LSA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G103270 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           SVKAEIDGNKLTV GKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSK +DKIDDDQTS
Sbjct: 62  SVKAEIDGNKLTVMGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKPKDKIDDDQTS 121

Query: 61  SNNKKSDK 69
           SNN KSDK
Sbjct: 122 SNNNKSDK 129

[Close]

BLAST of Bhi07G000234 vs. ExPASy TrEMBL
Match: A0A5A7U7D8 (Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G002580 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           SVKAEIDGNKLTV GKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSK +DKIDDDQTS
Sbjct: 60  SVKAEIDGNKLTVMGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKPKDKIDDDQTS 119

Query: 61  SNNKKSDK 69
           SNN K DK
Sbjct: 120 SNNNKFDK 127

[Close]

BLAST of Bhi07G000234 vs. ExPASy TrEMBL
Match: A0A1S3CIH0 (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103501337 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           SVKAEIDGNKLTV GKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSK +DKIDDDQTS
Sbjct: 60  SVKAEIDGNKLTVMGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKPKDKIDDDQTS 119

Query: 61  SNNKKSDK 69
           SNN K DK
Sbjct: 120 SNNNKFDK 127

[Close]

BLAST of Bhi07G000234 vs. ExPASy TrEMBL
Match: A0A6J1HML5 (heavy metal-associated isoprenylated plant protein 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464956 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           +VKAEI+GNKLTVTG+KIDA+KL EKLSNKTKKKVDLISPQ KKEKDSK + K D+DQTS
Sbjct: 56  TVKAEIEGNKLTVTGEKIDASKLLEKLSNKTKKKVDLISPQSKKEKDSKPKVKGDEDQTS 115

Query: 61  SNNKKSDK 69
           SNN KSDK
Sbjct: 116 SNNNKSDK 123

[Close]

BLAST of Bhi07G000234 vs. ExPASy TrEMBL
Match: A0A6J1HJ75 (heavy metal-associated isoprenylated plant protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464956 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   SVKAEIDGNKLTVTGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKLEDKIDDDQTS 60
           +VKAEI+GNKLTVTG+KIDA+KL EKLSNKTKKKVDLISPQ KKEKDSK + K D+DQTS
Sbjct: 56  TVKAEIEGNKLTVTGEKIDASKLLEKLSNKTKKKVDLISPQSKKEKDSKPKVKGDEDQTS 115

Query: 61  SNNKKSDK 69
           SNN KSDK
Sbjct: 116 SNNNKSDK 123

The following BLAST results are available for this feature:

BLAST of Bhi07G000234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60800.1	1.1e-09	58.46	Heavy metal transport/detoxification superfamily protein	[more]
AT5G60800.2	1.1e-09	58.46	Heavy metal transport/detoxification superfamily protein	[more]
AT2G28090.1	5.4e-06	50.00	Heavy metal transport/detoxification superfamily protein	[more]
AT2G36950.1	3.9e-04	59.09	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Bhi07G000234 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH5	1.5e-08	58.46	Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=...	[more]
Q9ZUV1	7.6e-05	50.00	Heavy metal-associated isoprenylated plant protein 1 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Bhi07G000234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSA4	2.1e-21	94.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G103270 PE=4 SV=1	[more]
A0A5A7U7D8	1.0e-20	92.65	Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. m...	[more]
A0A1S3CIH0	1.0e-20	92.65	heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=365...	[more]
A0A6J1HML5	3.4e-16	82.35	heavy metal-associated isoprenylated plant protein 3 isoform X2 OS=Cucurbita mos...	[more]
A0A6J1HJ75	3.4e-16	82.35	heavy metal-associated isoprenylated plant protein 3 isoform X1 OS=Cucurbita mos...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..46 e-value: 1.0E-6 score: 30.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..68
None	No IPR available	PANTHER	PTHR46413:SF2	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3	coord: 1..67
IPR044594	Heavy metal-associated isoprenylated plant protein 1/3/5/6	PANTHER	PTHR46413	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000234	Bhi07M000234	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding