Bhi06G001547 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G001547
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like
Location	chr6: 50811549 .. 50813056 (-)
RNA-Seq Expression	Bhi06G001547
Synteny	Bhi06G001547

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTATTTACTACTGTTCCCACTCTTAACCTTTACTCCTCATTTTAACCTTTAATTTCCTCTCTCTCCTCACTGTTTAACTCTCAGTTTTCTTTCACTTCCTTCTCTCTTCAAAAACAAAATCTCTCTCTCTTCTCTAATAATTTCCCCATTTCCCTCTCTTCATACCATAAAACTCTCTCATCACTCACCCTTTTCCCCTTCTATCCTCTTCTTCTAAGAAACACAATATCAAAAACAACCCCCAAAACAAAAACATGTTTTTGGAAAAGAAGTCATTTTGATCAAAGTTGTTGGATTTTGGGCTATTTTGGGCTATTTTTCTTCTATTGTTTTGGTTTTTTTTTTTTTTTAAAAAAAAAATTCTCACTTTCAATTTTATGATCATCAATGACGTTAATCCCTTTATGATCACCTCCCCCTTCACATTGTTCTTCTTCTTGATCATCTCTTCTTGCCATGCAAATTAAAACCCACTTCTTAGTTGAAAAAAGAAAAAAAAAAACCCTAAAATGAGAAGTGGGTTCTCTTCAAAACCCTAAAAGATGAGATCTTCCTCACACCGATAACAAAAAGTTTCAATCTTTATAAACGTTTCCTCATTTCTCTTTCTTTTTCAATTACTTTCATTGATATATATTTTTTTAGATGGATTTGTTTTCAGAATCATCATCCAATCCTCCTACTACTTATACCACTACTGCCACGGTCGCCGCCACCGCACCACCCACCGCCTCCGCCTCTGCCGCCACACCAAGCCGGTACGAGAATCAAAAACGGAGAGATTGGAACACGTTTTGTCAATACCTCCGGAACCACCGGCCGCCGTTGGCTCTTCAGATGTGCAGCGGCGCTCACGTGCTGGAATTCCTCCGGTACTTAGATCAGTTCGGGAAGACGAAAGTACACAACCAAACCTGCCCCTTCTTCGGGCTGCCCAACCCACCTGCCCCCTGCCCGTGCCCGCTGAGACAAGCGTGGGGCAGCTTAGACGCCTTGATCGGTCGGCTCCGGGCAGCTTATGAAGAGAACGGCGGTCGGGCGGAGGGAAATCCGTTTGGAGCAAGAGCGGTTCGTTTGTATTTAAGGGAAGTTCGTGATTTTCAAGCGAAAGCAAGAGGTGTTAGTTATGAGAAGAAGAGAAAAAGGCCAAAGCAAAAAGTTACTAATTCTTCAGCAACTCATGATCATCAAAATCCTACAACTTGAAATTCTTATATATATATATATATATAAATATATATATTGTGTATGAGAAAAGAATTGTAGTCTCTCTATTTTTAATTTTGAATTATTGCAAACATCGAGATGAAGATTTGAACCTTATAGAAGGTTTTTCTCTTTTTTCTCTCGCAAATGATCTTAAGCTATGTTCAAGTTGACTTTTTATTTTATTTCCATATGTTCTAGGTAAATATTTATGATTATGATATAAGTATTGGAGTATGTTAATCTCTATGGTATTATTTAGTAGAGGGTTTTTTTTCCTTCTTTTGATCTTGAGGTGAT

mRNA sequence

GCCTATTTACTACTGTTCCCACTCTTAACCTTTACTCCTCATTTTAACCTTTAATTTCCTCTCTCTCCTCACTGTTTAACTCTCAGTTTTCTTTCACTTCCTTCTCTCTTCAAAAACAAAATCTCTCTCTCTTCTCTAATAATTTCCCCATTTCCCTCTCTTCATACCATAAAACTCTCTCATCACTCACCCTTTTCCCCTTCTATCCTCTTCTTCTAAGAAACACAATATCAAAAACAACCCCCAAAACAAAAACATGTTTTTGGAAAAGAAGTCATTTTGATCAAAGTTGTTGGATTTTGGGCTATTTTGGGCTATTTTTCTTCTATTGTTTTGGTTTTTTTTTTTTTTTAAAAAAAAAATTCTCACTTTCAATTTTATGATCATCAATGACGTTAATCCCTTTATGATCACCTCCCCCTTCACATTGTTCTTCTTCTTGATCATCTCTTCTTGCCATGCAAATTAAAACCCACTTCTTAGTTGAAAAAAGAAAAAAAAAAACCCTAAAATGAGAAGTGGGTTCTCTTCAAAACCCTAAAAGATGAGATCTTCCTCACACCGATAACAAAAAGTTTCAATCTTTATAAACGTTTCCTCATTTCTCTTTCTTTTTCAATTACTTTCATTGATATATATTTTTTTAGATGGATTTGTTTTCAGAATCATCATCCAATCCTCCTACTACTTATACCACTACTGCCACGGTCGCCGCCACCGCACCACCCACCGCCTCCGCCTCTGCCGCCACACCAAGCCGGTACGAGAATCAAAAACGGAGAGATTGGAACACGTTTTGTCAATACCTCCGGAACCACCGGCCGCCGTTGGCTCTTCAGATGTGCAGCGGCGCTCACGTGCTGGAATTCCTCCGGTACTTAGATCAGTTCGGGAAGACGAAAGTACACAACCAAACCTGCCCCTTCTTCGGGCTGCCCAACCCACCTGCCCCCTGCCCGTGCCCGCTGAGACAAGCGTGGGGCAGCTTAGACGCCTTGATCGGTCGGCTCCGGGCAGCTTATGAAGAGAACGGCGGTCGGGCGGAGGGAAATCCGTTTGGAGCAAGAGCGGTTCGTTTGTATTTAAGGGAAGTTCGTGATTTTCAAGCGAAAGCAAGAGGTGTTAGTTATGAGAAGAAGAGAAAAAGGCCAAAGCAAAAAGTTACTAATTCTTCAGCAACTCATGATCATCAAAATCCTACAACTTGAAATTCTTATATATATATATATATATAAATATATATATTGTGTATGAGAAAAGAATTGTAGTCTCTCTATTTTTAATTTTGAATTATTGCAAACATCGAGATGAAGATTTGAACCTTATAGAAGGTTTTTCTCTTTTTTCTCTCGCAAATGATCTTAAGCTATGTTCAAGTTGACTTTTTATTTTATTTCCATATGTTCTAGGTAAATATTTATGATTATGATATAAGTATTGGAGTATGTTAATCTCTATGGTATTATTTAGTAGAGGGTTTTTTTTCCTTCTTTTGATCTTGAGGTGAT

Coding sequence (CDS)

ATGGATTTGTTTTCAGAATCATCATCCAATCCTCCTACTACTTATACCACTACTGCCACGGTCGCCGCCACCGCACCACCCACCGCCTCCGCCTCTGCCGCCACACCAAGCCGGTACGAGAATCAAAAACGGAGAGATTGGAACACGTTTTGTCAATACCTCCGGAACCACCGGCCGCCGTTGGCTCTTCAGATGTGCAGCGGCGCTCACGTGCTGGAATTCCTCCGGTACTTAGATCAGTTCGGGAAGACGAAAGTACACAACCAAACCTGCCCCTTCTTCGGGCTGCCCAACCCACCTGCCCCCTGCCCGTGCCCGCTGAGACAAGCGTGGGGCAGCTTAGACGCCTTGATCGGTCGGCTCCGGGCAGCTTATGAAGAGAACGGCGGTCGGGCGGAGGGAAATCCGTTTGGAGCAAGAGCGGTTCGTTTGTATTTAAGGGAAGTTCGTGATTTTCAAGCGAAAGCAAGAGGTGTTAGTTATGAGAAGAAGAGAAAAAGGCCAAAGCAAAAAGTTACTAATTCTTCAGCAACTCATGATCATCAAAATCCTACAACTTGA

Protein sequence

MDLFSESSSNPPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKVTNSSATHDHQNPTT

Homology

[Close]

BLAST of Bhi06G001547 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-68
Identity = 128/167 (76.65%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MDLFSESSSNPPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPP 60
           MDL S   +  P + T         PP++       SRYENQKRRDWNTFCQYLRNHRPP
Sbjct: 1   MDLISHQPNKNPNSST------QLTPPSS-------SRYENQKRRDWNTFCQYLRNHRPP 60

Query: 61  LALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGR 120
           L+L  CSGAHVLEFLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIGR
Sbjct: 61  LSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKR 168
           LRAAYEENGG  E NPFG+RAVRL+LREVRDFQAKARGVSYEKKRKR
Sbjct: 121 LRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARGVSYEKKRKR 154

[Close]

BLAST of Bhi06G001547 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-67
Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MDLFSESSSN-PPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRP 60
           MDL S++ +N  P T  +T T      P++ +S  + SRYENQKRRDWNTFCQYLRNH P
Sbjct: 1   MDLISQNHNNRNPNTSLSTQT------PSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHP 60

Query: 61  PLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIG 120
           PL+L  CSGAHVL+FLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIG
Sbjct: 61  PLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKVTNSS 177
           RLRAAYEENGG  E +PFG+R+VR++LREVRDFQAK+RGVSYEKKRKR   K    S
Sbjct: 121 RLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSRGVSYEKKRKRVNNKQITQS 171

[Close]

BLAST of Bhi06G001547 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-65
Identity = 127/178 (71.35%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 9   SNPPTTYTTTATVAATAPPTASAS-AATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCS 68
           SN  ++ T      AT P ++S+S +A  SRYENQKRRDWNTF QYLRNHRPPL+L  CS
Sbjct: 24  SNNSSSVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCS 83

Query: 69  GAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEE 128
           GAHVLEFLRYLDQFGKTKVH   C F+G PNPPAPCPCPLRQAWGSLDALIGRLRAA+EE
Sbjct: 84  GAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEE 143

Query: 129 NGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKR---PKQKVTNSSATHDHQ 183
           NGG+ E NPFGARAVRLYLREVRD Q+KARGVSYEKK+++   P    ++SSA   HQ
Sbjct: 144 NGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPSSSTSSSSAVASHQ 201

[Close]

BLAST of Bhi06G001547 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 244.2 bits (622), Expect = 8.3e-65
Identity = 121/154 (78.57%), Postives = 130/154 (84.42%), Query Frame = 0


Query: 16  TTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCSGAHVLEFL 75
           TTT T ++++  +  +     SRYENQKRRDWNTF QYLRNHRPPL+L  CSGAHVLEFL
Sbjct: 26  TTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFL 85

Query: 76  RYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAEGN 135
           RYLDQFGKTKVH   CPFFG PNPPAPC CPLRQAWGSLDALIGRLRAA+EENGG  E N
Sbjct: 86  RYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETN 145

Query: 136 PFGARAVRLYLREVRDFQAKARGVSYE-KKRKRP 169
           PFGARAVRLYLREVRD QAKARG+SYE KKRKRP
Sbjct: 146 PFGARAVRLYLREVRDSQAKARGISYEKKKRKRP 179

[Close]

BLAST of Bhi06G001547 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-61
Identity = 111/149 (74.50%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 26  PPTASASAATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCSGAHVLEFLRYLDQFGKTK 85
           P   S+  ATPSRYE+QKRRDWNTF QYL+NH+PPLAL  CSGAHV+EFL+YLDQFGKTK
Sbjct: 19  PSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTK 78

Query: 86  VHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAEGNPFGARAVRLY 145
           VH   CP+FG   PP+PC CPL+QAWGSLDALIGRLRAAYEENGGR + NPF ARAVR+Y
Sbjct: 79  VHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIY 138

Query: 146 LREVRDFQAKARGVSYE-KKRKRPKQKVT 174
           LREVR+ QAKARG+ YE KKRKRP    T
Sbjct: 139 LREVRESQAKARGIPYEKKKRKRPPTVTT 167

[Close]

BLAST of Bhi06G001547 vs. ExPASy Swiss-Prot
Match: Q6NNI3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 OS=Arabidopsis thaliana OX=3702 GN=LSH1 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.3e-67
Identity = 128/167 (76.65%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MDLFSESSSNPPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPP 60
           MDL S   +  P + T         PP++       SRYENQKRRDWNTFCQYLRNHRPP
Sbjct: 1   MDLISHQPNKNPNSST------QLTPPSS-------SRYENQKRRDWNTFCQYLRNHRPP 60

Query: 61  LALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGR 120
           L+L  CSGAHVLEFLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIGR
Sbjct: 61  LSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKR 168
           LRAAYEENGG  E NPFG+RAVRL+LREVRDFQAKARGVSYEKKRKR
Sbjct: 121 LRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARGVSYEKKRKR 154

[Close]

BLAST of Bhi06G001547 vs. ExPASy Swiss-Prot
Match: Q7XDD0 (Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.9e-67
Identity = 122/158 (77.22%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 23  ATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCSGAHVLEFLRYLDQFG 82
           AT   +ASA+ A+PSRYE+QKRRDWNTF QYLRNHRPPL+L  CSGAHVLEFLRYLDQFG
Sbjct: 25  ATGATSASAAGASPSRYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLEFLRYLDQFG 84

Query: 83  KTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAEGNPFGARAV 142
           KTKVH   CPFFG P PPAPCPCPLRQAWGSLDAL+GRLRAAYEENGGR E NPFGARAV
Sbjct: 85  KTKVHAPACPFFGHPAPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPENNPFGARAV 144

Query: 143 RLYLREVRDFQAKARGVSYEKKRKRPKQKVTNSSATHD 181
           RLYLREVR+ QA+ARGVSYEKK+++     ++++A HD
Sbjct: 145 RLYLREVREHQARARGVSYEKKKRKKPPHPSSAAAAHD 182

[Close]

BLAST of Bhi06G001547 vs. ExPASy Swiss-Prot
Match: Q9M836 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 OS=Arabidopsis thaliana OX=3702 GN=LSH2 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.9e-66
Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MDLFSESSSN-PPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRP 60
           MDL S++ +N  P T  +T T      P++ +S  + SRYENQKRRDWNTFCQYLRNH P
Sbjct: 1   MDLISQNHNNRNPNTSLSTQT------PSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHP 60

Query: 61  PLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIG 120
           PL+L  CSGAHVL+FLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIG
Sbjct: 61  PLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKVTNSS 177
           RLRAAYEENGG  E +PFG+R+VR++LREVRDFQAK+RGVSYEKKRKR   K    S
Sbjct: 121 RLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSRGVSYEKKRKRVNNKQITQS 171

[Close]

BLAST of Bhi06G001547 vs. ExPASy Swiss-Prot
Match: B8AH02 (Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64
Identity = 121/164 (73.78%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 22  AATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCSGAHVLEFLRYLDQF 81
           A+++    +A+  TPSRYE QKRRDWNTF QYLRNHRPPL L  CSGAHVLEFLRYLDQF
Sbjct: 57  ASSSAGGGAATPQTPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQF 116

Query: 82  GKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAEGNPFGARA 141
           GKTKVH   CPFFG PNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGGR E NPF  RA
Sbjct: 117 GKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRA 176

Query: 142 VRLYLREVRDFQAKARGVSYE-KKRKRPKQKVTNSSATHDHQNP 185
           VRLYLREVR+ QA+ARGVSYE KKRK+P+   T+    H H  P
Sbjct: 177 VRLYLREVREHQARARGVSYEKKKRKKPQPADTSGGGGHPHPPP 220

[Close]

BLAST of Bhi06G001547 vs. ExPASy Swiss-Prot
Match: Q0DZF3 (Protein G1-like3 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L3 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64
Identity = 121/164 (73.78%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 22  AATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRPPLALQMCSGAHVLEFLRYLDQF 81
           A+++    +A+  TPSRYE QKRRDWNTF QYLRNHRPPL L  CSGAHVLEFLRYLDQF
Sbjct: 57  ASSSAGGGAATPQTPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQF 116

Query: 82  GKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAEGNPFGARA 141
           GKTKVH   CPFFG PNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGGR E NPF  RA
Sbjct: 117 GKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRA 176

Query: 142 VRLYLREVRDFQAKARGVSYE-KKRKRPKQKVTNSSATHDHQNP 185
           VRLYLREVR+ QA+ARGVSYE KKRK+P+   T+    H H  P
Sbjct: 177 VRLYLREVREHQARARGVSYEKKKRKKPQPADTSGGGGHPHPPP 220

[Close]

BLAST of Bhi06G001547 vs. ExPASy TrEMBL
Match: A0A0A0LG60 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009550 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.0e-86
Identity = 166/188 (88.30%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 1   MDLFSESSSNPPT-TYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHRP 60
           MDLFSESSSN  T T TTT T   TA  T +ASA TPSRYENQKRRDWNTFCQYLRNHRP
Sbjct: 1   MDLFSESSSNNSTPTTTTTTTTPPTATTTTAASATTPSRYENQKRRDWNTFCQYLRNHRP 60

Query: 61  PLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIG 120
           PLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIG
Sbjct: 61  PLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKV-TNSSAT 180
           RLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQK+ T+S+ T
Sbjct: 121 RLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKINTSSTTT 180

Query: 181 HDHQNPTT 187
           HDH   +T
Sbjct: 181 HDHHQDST 188

[Close]

BLAST of Bhi06G001547 vs. ExPASy TrEMBL
Match: A0A5D3BFP5 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001100 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.6e-86
Identity = 167/189 (88.36%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MDLFSESSSN--PPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHR 60
           MDLFSESSSN   PTT TTT T   TA  +A+ASA TPSRYENQKRRDWNTFCQYLRNHR
Sbjct: 1   MDLFSESSSNNDNPTT-TTTTTTPPTATTSAAASATTPSRYENQKRRDWNTFCQYLRNHR 60

Query: 61  PPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALI 120
           PPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALI
Sbjct: 61  PPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALI 120

Query: 121 GRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKV-TNSSA 180
           GRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQK+ T+S+ 
Sbjct: 121 GRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKINTSSTT 180

Query: 181 THDHQNPTT 187
           THDH   +T
Sbjct: 181 THDHHQDST 188

[Close]

BLAST of Bhi06G001547 vs. ExPASy TrEMBL
Match: A0A1S3C396 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2-like OS=Cucumis melo OX=3656 GN=LOC103496393 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.6e-86
Identity = 167/189 (88.36%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MDLFSESSSN--PPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRNHR 60
           MDLFSESSSN   PTT TTT T   TA  +A+ASA TPSRYENQKRRDWNTFCQYLRNHR
Sbjct: 1   MDLFSESSSNNDNPTT-TTTTTTPPTATTSAAASATTPSRYENQKRRDWNTFCQYLRNHR 60

Query: 61  PPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALI 120
           PPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALI
Sbjct: 61  PPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALI 120

Query: 121 GRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKV-TNSSA 180
           GRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQK+ T+S+ 
Sbjct: 121 GRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKINTSSTT 180

Query: 181 THDHQNPTT 187
           THDH   +T
Sbjct: 181 THDHHQDST 188

[Close]

BLAST of Bhi06G001547 vs. ExPASy TrEMBL
Match: A0A6J1HLQ5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465684 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.4e-81
Identity = 160/186 (86.02%), Postives = 165/186 (88.71%), Query Frame = 0


Query: 1   MDLFSESSSNPPTTYTTTATVAA-----TAPPTASAS-----AATPSRYENQKRRDWNTF 60
           MDLFSESSSN PT Y TT T AA     TA P+ S+S     AATPSRYENQKRRDWNTF
Sbjct: 1   MDLFSESSSN-PTPYDTTNTAAAAAAVVTACPSPSSSSSATAAATPSRYENQKRRDWNTF 60

Query: 61  CQYLRNHRPPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQA 120
           CQYLRNHRPPL+L MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQA
Sbjct: 61  CQYLRNHRPPLSLPMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQA 120

Query: 121 WGSLDALIGRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQ 177
           WGSLDALIGRLRAAYEENGGR E NPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQ
Sbjct: 121 WGSLDALIGRLRAAYEENGGRPESNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQ 180

[Close]

BLAST of Bhi06G001547 vs. ExPASy TrEMBL
Match: A0A6J1KC51 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493577 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.3e-81
Identity = 156/182 (85.71%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 1   MDLFSESSSN----PPTTYTTTATVAATAPPTASASAATPSRYENQKRRDWNTFCQYLRN 60
           MDLFS+SSSN    PPTT TTT T AA +P  +S+S  TPSRYENQKRRDWNTFCQYLRN
Sbjct: 74  MDLFSKSSSNPIPIPPTTTTTTITAAACSP--SSSSTTTPSRYENQKRRDWNTFCQYLRN 133

Query: 61  HRPPLALQMCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDA 120
           HRPPLALQMCSGAHVLEFLRYLD FGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDA
Sbjct: 134 HRPPLALQMCSGAHVLEFLRYLDHFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDA 193

Query: 121 LIGRLRAAYEENGGRAEGNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKVTNSS 179
           LIGRLRAA+EENGGR E NPFGARAVRLYLREVRDFQ KARGVSYEKKRKRPKQK     
Sbjct: 194 LIGRLRAAFEENGGRPEANPFGARAVRLYLREVRDFQTKARGVSYEKKRKRPKQKQKQEG 253

The following BLAST results are available for this feature:

BLAST of Bhi06G001547 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28490.1	1.6e-68	76.65	Protein of unknown function (DUF640)	[more]
AT3G04510.1	1.4e-67	71.75	Protein of unknown function (DUF640)	[more]
AT2G31160.1	1.3e-65	71.35	Protein of unknown function (DUF640)	[more]
AT3G23290.2	8.3e-65	78.57	Protein of unknown function (DUF640)	[more]
AT1G07090.1	1.9e-61	74.50	Protein of unknown function (DUF640)	[more]

BLAST of Bhi06G001547 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NNI3	2.3e-67	76.65	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q7XDD0	3.9e-67	77.22	Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1	[more]
Q9M836	1.9e-66	71.75	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
B8AH02	1.4e-64	73.78	Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1	[more]
Q0DZF3	1.4e-64	73.78	Protein G1-like3 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L3 PE=1 SV=1	[more]

BLAST of Bhi06G001547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG60	3.0e-86	88.30	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009550 PE=3 S...	[more]
A0A5D3BFP5	8.6e-86	88.36	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C396	8.6e-86	88.36	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HLQ5	6.4e-81	86.02	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KC51	8.3e-81	85.71	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 32..151 e-value: 1.3E-65 score: 219.2
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 38..165 score: 83.004524
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..186
None	No IPR available	PANTHER	PTHR31165:SF15	PROTEIN G1-LIKE5	coord: 13..180
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 13..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001547	Bhi06M001547	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus