Bhi06G000498 (gene) Wax gourd (B227) v1

Overview
NameBhi06G000498
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionskin secretory protein xP2
Locationchr6: 13369550 .. 13370360 (+)
RNA-Seq ExpressionBhi06G000498
SyntenyBhi06G000498
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCTTGCAGTCTTTCTCTATATACATTAGAGGATTTCTGCAACCTTCAGAATCCTAAATAAATCATTCCCTCTTTTTCTTTTCCTCTTCTTTTTCAATTCAATTTCCCCATCTCAAATCAGTAACAATGGCCCGTCAATTGGTTCTCCTCGCTCTCCTCTTCACCGCCGTCGTCGGCATTGTCTCAGCCGCCGAAGCCCCCACCGCCTCCCCTGCTTCCTCCCCTGCAGCCGATGACCATGCAGTCTCCGATGCCGAAAAGACTCCTGCAGCTGCTCCTTCCAAGTCTCCCGCCGCCGCCACCACCGCCCCAATCGCCGCCACTCCATCCGCCGCCGGTGCTCCCGAAGGAGCTGCTTCTTCCCCCCAGGCTGAGGCTGAATCCCCTGCTGCCGGTGGCCCTGCTTCCGGCCCTGCTGGTGATGAGTCTTCTTCTGATTCCCCTGCTGGAGCCCCTGAATCCGACGCCGACGTGTCATCTCCACCTTCCCCAACTGGACCTGCCGCCGGACCTGCTGACGGACCAGCCAGCGACGGCGAAGCTGCTGCTGATGCACCCGCTGACTCACCCACTGATGCAGCGAGTGGGGGTTCTTTCCTGAAAGTGTCCGTTGCCGCCGTTGCTGGGATTTCAGCCGTTGCTGGATTCTTTGCCTTCTAAGCTTTTTTAATTTAATGTGAGATGGATTTGAATTGTATTTGAAGAGATTAATGATTCTGTTATTAAATATTATTTGTATTTGATGATTCTCTGAGAGAGGGATGATCATATTATCTTTTGAATCTTCATTACTTGATATTCCATGTTTTT

mRNA sequence

GGTCTTGCAGTCTTTCTCTATATACATTAGAGGATTTCTGCAACCTTCAGAATCCTAAATAAATCATTCCCTCTTTTTCTTTTCCTCTTCTTTTTCAATTCAATTTCCCCATCTCAAATCAGTAACAATGGCCCGTCAATTGGTTCTCCTCGCTCTCCTCTTCACCGCCGTCGTCGGCATTGTCTCAGCCGCCGAAGCCCCCACCGCCTCCCCTGCTTCCTCCCCTGCAGCCGATGACCATGCAGTCTCCGATGCCGAAAAGACTCCTGCAGCTGCTCCTTCCAAGTCTCCCGCCGCCGCCACCACCGCCCCAATCGCCGCCACTCCATCCGCCGCCGGTGCTCCCGAAGGAGCTGCTTCTTCCCCCCAGGCTGAGGCTGAATCCCCTGCTGCCGGTGGCCCTGCTTCCGGCCCTGCTGGTGATGAGTCTTCTTCTGATTCCCCTGCTGGAGCCCCTGAATCCGACGCCGACGTGTCATCTCCACCTTCCCCAACTGGACCTGCCGCCGGACCTGCTGACGGACCAGCCAGCGACGGCGAAGCTGCTGCTGATGCACCCGCTGACTCACCCACTGATGCAGCGAGTGGGGGTTCTTTCCTGAAAGTGTCCGTTGCCGCCGTTGCTGGGATTTCAGCCGTTGCTGGATTCTTTGCCTTCTAAGCTTTTTTAATTTAATGTGAGATGGATTTGAATTGTATTTGAAGAGATTAATGATTCTGTTATTAAATATTATTTGTATTTGATGATTCTCTGAGAGAGGGATGATCATATTATCTTTTGAATCTTCATTACTTGATATTCCATGTTTTT

Coding sequence (CDS)

ATGGCCCGTCAATTGGTTCTCCTCGCTCTCCTCTTCACCGCCGTCGTCGGCATTGTCTCAGCCGCCGAAGCCCCCACCGCCTCCCCTGCTTCCTCCCCTGCAGCCGATGACCATGCAGTCTCCGATGCCGAAAAGACTCCTGCAGCTGCTCCTTCCAAGTCTCCCGCCGCCGCCACCACCGCCCCAATCGCCGCCACTCCATCCGCCGCCGGTGCTCCCGAAGGAGCTGCTTCTTCCCCCCAGGCTGAGGCTGAATCCCCTGCTGCCGGTGGCCCTGCTTCCGGCCCTGCTGGTGATGAGTCTTCTTCTGATTCCCCTGCTGGAGCCCCTGAATCCGACGCCGACGTGTCATCTCCACCTTCCCCAACTGGACCTGCCGCCGGACCTGCTGACGGACCAGCCAGCGACGGCGAAGCTGCTGCTGATGCACCCGCTGACTCACCCACTGATGCAGCGAGTGGGGGTTCTTTCCTGAAAGTGTCCGTTGCCGCCGTTGCTGGGATTTCAGCCGTTGCTGGATTCTTTGCCTTCTAA

Protein sequence

MARQLVLLALLFTAVVGIVSAAEAPTASPASSPAADDHAVSDAEKTPAAAPSKSPAAATTAPIAATPSAAGAPEGAASSPQAEAESPAAGGPASGPAGDESSSDSPAGAPESDADVSSPPSPTGPAAGPADGPASDGEAAADAPADSPTDAASGGSFLKVSVAAVAGISAVAGFFAF
Homology
BLAST of Bhi06G000498 vs. TAIR 10
Match: AT5G14380.1 (arabinogalactan protein 6 )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 71/178 (39.89%), Postives = 94/178 (52.81%), Query Frame = 0

Query: 1   MARQLVLLALLFTAVVGIVSAAEAPTASPASSPAADDHAVSDAEKTPAAAPSKSPAAATT 60
           MARQ V+L LL T  +    AA+AP+ASP  SP            +P AAP+K+P A T 
Sbjct: 1   MARQFVVLVLL-TLTIATAFAADAPSASPKKSP------------SPTAAPTKAPTATTK 60

Query: 61  APIAATPSAAGAPE-GAASSPQAEAESPAAGGPASGPAGDESSSDSPAGAPESDADVSSP 120
           AP A T + A AP+  +ASSP  +A SPAA GP      D+ S+ SP+ + E+   VSSP
Sbjct: 61  APSAPTKAPAAAPKSSSASSP--KASSPAAEGPV---PEDDYSASSPSDSAEAPT-VSSP 120

Query: 121 PSPTGPAAGPADGPASDGEAAADAPADSPTDAASGGSFLKVSVAAVAGISAVAGFFAF 178
           P+PT            D  +AAD P+D PT  +     +  +  +V G  A  GFF F
Sbjct: 121 PAPT-----------PDSTSAADGPSDGPTAESPKSGAVTTAKFSVVGTVATVGFFFF 148

BLAST of Bhi06G000498 vs. TAIR 10
Match: AT3G01700.1 (arabinogalactan protein 11 )

HSP 1 Score: 44.7 bits (104), Expect = 9.2e-05
Identity = 74/178 (41.57%), Postives = 98/178 (55.06%), Query Frame = 0

Query: 1   MARQLVLLALLFTAVVGIVSAAEAPTASPASSPAADDHAVSDAEKTPAAAPSKSPAAATT 60
           MAR  V++ALL  A VG V AA+AP+A+                  P A+P+KSP   T 
Sbjct: 1   MARLFVVVALLALA-VGTVFAADAPSAA------------------PTASPTKSP---TK 60

Query: 61  APIAATPSAAGAPEGAASSPQAEAESPAAGGPASGPAGDESSSDSPAGAPESDADVSSPP 120
           AP AA  S+A AP+  ASSP AE  +P           D+ S+ SP+ + E+   VSSPP
Sbjct: 61  APAAAPKSSAAAPK--ASSPVAEEPTPE----------DDYSAASPSDSAEAPT-VSSPP 120

Query: 121 SPTGPAAGP-ADGPASDGEAAADAPADSPTDAASGGSFLKVSVAAVAGISAVAGFFAF 178
           +PT  A GP +DGP+SDG AAA++P    T      + +K+S   +AG  A AGFF F
Sbjct: 121 APTPEADGPSSDGPSSDGPAAAESPKSGAT------TNVKLS---IAGTVAAAGFFIF 134

BLAST of Bhi06G000498 vs. ExPASy Swiss-Prot
Match: Q9LY91 (Classical arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=AGP6 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 71/178 (39.89%), Postives = 94/178 (52.81%), Query Frame = 0

Query: 1   MARQLVLLALLFTAVVGIVSAAEAPTASPASSPAADDHAVSDAEKTPAAAPSKSPAAATT 60
           MARQ V+L LL T  +    AA+AP+ASP  SP            +P AAP+K+P A T 
Sbjct: 1   MARQFVVLVLL-TLTIATAFAADAPSASPKKSP------------SPTAAPTKAPTATTK 60

Query: 61  APIAATPSAAGAPE-GAASSPQAEAESPAAGGPASGPAGDESSSDSPAGAPESDADVSSP 120
           AP A T + A AP+  +ASSP  +A SPAA GP      D+ S+ SP+ + E+   VSSP
Sbjct: 61  APSAPTKAPAAAPKSSSASSP--KASSPAAEGPV---PEDDYSASSPSDSAEAPT-VSSP 120

Query: 121 PSPTGPAAGPADGPASDGEAAADAPADSPTDAASGGSFLKVSVAAVAGISAVAGFFAF 178
           P+PT            D  +AAD P+D PT  +     +  +  +V G  A  GFF F
Sbjct: 121 PAPT-----------PDSTSAADGPSDGPTAESPKSGAVTTAKFSVVGTVATVGFFFF 148

BLAST of Bhi06G000498 vs. ExPASy TrEMBL
Match: A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 9.8e-39
Identity = 135/194 (69.59%), Postives = 147/194 (75.77%), Query Frame = 0

Query: 1   MARQLVLLALLFT-AVVGIVSAAEAPTASPASSPAADDHAV----SDAEKTPAAAPSKSP 60
           MARQ +LLALLF+ AV+GIVSAAEAP ASPASSPA+   A     SD  KTPAAAPSK+P
Sbjct: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60

Query: 61  AAATTAPIAATPSAAGAPEGAASSPQA-----EAESPAAGGPASGPAGDESSS-----DS 120
           AAA  APIA TPSAAGAP+GAAS+P A     EA+SP AGGPAS PAGDESSS      +
Sbjct: 61  AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120

Query: 121 PAGAPESDADVSSPPSPTGPAAGPADGPASDGEAAADAPADSPTD--AASGGSFLKVSVA 178
           PAGAP SDA+VSSPPSPTGPAAGPA       +AAADAPADSP D  A SGGS +KVSVA
Sbjct: 121 PAGAPASDAEVSSPPSPTGPAAGPA------SDAAADAPADSPADSPAPSGGSLVKVSVA 180

BLAST of Bhi06G000498 vs. ExPASy TrEMBL
Match: A0A0A0KUB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-30
Identity = 110/165 (66.67%), Postives = 128/165 (77.58%), Query Frame = 0

Query: 22  AEAPTASPASSPAADDHAVSDAEKTPAAAPSKSPAAATTAPIAATPSAAGAPEGAASSPQ 81
           A +P +SPASSP A D   SD  KTPAAAPSKSPAAA  APIAATPSAAGAP+GAAS+P 
Sbjct: 84  ASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPS 143

Query: 82  A-----EAESPAAGGPASGPAGDESSSD-SPAGAPESDADVSSPPSPTGPAAGPADGPAS 141
           A     EA++P AGGPAS PAGDESSS  +PAGAPE  ADVSSPPSPTGPAAGP     +
Sbjct: 144 AKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAPE--ADVSSPPSPTGPAAGPTSDAVA 203

Query: 142 D--GEAAADAPADSPTDA-ASGGSFLKVSVAAVAGISAVAGFFAF 178
           D   +++AD+PAD+P+D+ A+GGS +KVSVAAVAGIS + G F F
Sbjct: 204 DAPADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 246

BLAST of Bhi06G000498 vs. ExPASy TrEMBL
Match: A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.0e-28
Identity = 107/155 (69.03%), Postives = 115/155 (74.19%), Query Frame = 0

Query: 35  ADDHAVSDAEKTPAAAPSKSPAAATTAPIAATPSAAGAPEGAASSPQA-----EAESPAA 94
           A D   SD  KTPAAAPSK+PAAA  APIA TPSAAGAP+GAAS+P A     EA+SP A
Sbjct: 4   AADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVA 63

Query: 95  GGPASGPAGDESSS-----DSPAGAPESDADVSSPPSPTGPAAGPADGPASDGEAAADAP 154
           GGPAS PAGDESSS      +PAGAP SDA+VSSPPSPTGPAAGPA       +AAADAP
Sbjct: 64  GGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPA------SDAAADAP 123

Query: 155 ADSPTD--AASGGSFLKVSVAAVAGISAVAGFFAF 178
           ADSP D  A SGGS +KVSVAAVAGIS V G F F
Sbjct: 124 ADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF 152

BLAST of Bhi06G000498 vs. ExPASy TrEMBL
Match: A0A6J1BWF7 (brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 8.3e-22
Identity = 117/202 (57.92%), Postives = 139/202 (68.81%), Query Frame = 0

Query: 1   MARQLVLLALLFTAVVGIVSAAEAPTASPASSP-------AADDHAVSDAEKTPAAAPSK 60
           MARQLV+LALLF AVVG+VSAA+AP+ +PA++P       A D  A       PAAAPSK
Sbjct: 1   MARQLVVLALLFAAVVGVVSAAKAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK 60

Query: 61  S-----PAAA-TTAPIAATPSAAGAPEGAASSPQAE------AESPAAGGPASGPAGDES 120
           S     PAAA + AP +ATP AA AP+GAASSP A+      AES  AG PAS PA D  
Sbjct: 61  SNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGTKAESAPAGSPASSPAADGP 120

Query: 121 SSD-SPAGAPESDADVSSPPSPTGPAAGPADGPASDGEA---AADAPA-DSPTDA-ASGG 178
           +SD SPA +P++ ADVSSPPSP+GPA   AD  A+D +A   AA  PA D+PTDA ASG 
Sbjct: 121 ASDESPAASPDA-ADVSSPPSPSGPA---ADSDAADADADAPAAGGPAGDAPTDAPASGA 180

BLAST of Bhi06G000498 vs. ExPASy TrEMBL
Match: A0A6J1FDY2 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.4e-16
Identity = 108/229 (47.16%), Postives = 126/229 (55.02%), Query Frame = 0

Query: 1   MARQLVLLALLFTAVVGIVSAAE------------------APTASP---------ASSP 60
           MARQL+LLAL+F  VVGIVSAA                   A  A+P         ASSP
Sbjct: 76  MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTAAAAAPSPAHAHKGAASSP 135

Query: 61  AAD----------DHAVSDAEKTPAAAPS------KSPAAATTAPIAATPSAAGAPEGAA 120
            AD            A + A K  A AP       K+ A A  A   A  + AGAP+  A
Sbjct: 136 KADAGAPKADAGAPEADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADA 195

Query: 121 SSPQAEAESP--------AAGGPASGPAGDESSSDSPAGAPESDADVSSPPSPTGPAAGP 178
            +P+AEA +P         A GPASGPAG+E S+DSPAG+PESDAD SSPPSP+GPAA  
Sbjct: 196 GAPEAEAGAPKASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAA-- 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G14380.11.1e-0539.89arabinogalactan protein 6 [more]
AT3G01700.19.2e-0541.57arabinogalactan protein 11 [more]
Match NameE-valueIdentityDescription
Q9LY911.5e-0439.89Classical arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=AGP6 PE=2... [more]
Match NameE-valueIdentityDescription
A0A1S3CA929.8e-3969.59skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1[more]
A0A0A0KUB82.9e-3066.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1[more]
A0A5D3CDS46.0e-2869.03Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A6J1BWF78.3e-2257.92brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4... [more]
A0A6J1FDY22.4e-1647.16skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000498Bhi06M000498mRNA