Bhi06G000273 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000273
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein SPIRAL1-like 3
Location	chr6: 7530688 .. 7534347 (-)
RNA-Seq Expression	Bhi06G000273
Synteny	Bhi06G000273

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAACTAGCATCTTAGGCCTGTGCTGGGAAGACGTTCTGCTAGCTTCTTACATTTTGCTCTGTCTCTTCCTCTTGATCCCATTTTCATTTCGAGAAGATTTTCCAGGTACCCATTTCAAATCTCCACTTTCCCAATTCAGATTCACATTTCTTTAGGGTTTTTTTTTTCTCACCGTTCTAATATTTTGTTTGTGTTGTTTTTGTTTACTAATTTGATTTCTTTTCTTTAATCTTTAATGAAACTGTTGAGATTTCATGAGGTTGAAATCACATGTGATCCTTGTTTTGTTCGGTATTGAATGGATTGAAATGTTTGAAATGCTTGTTGCGTTGATGGATGATCTGAGAGCTTAAAATTATAGCACGCTCGTGGGTAATGGACTTGGAAGAAGAAGGTTGGGAATATTTGAAGCATGATACAAATAATGCATAGAAATTAATGTTGTCGAAGTATTGATATAATCAAATGTACCGTAATCTTACATTTTTGAGGTGATTGATGATTTAAGATGGTATGGTGCTAGAGTGCGAGGTACTTTGTTAGAGCACAAGTAAGGTTGTATTAAAGTATTGATTTACTCAGATTTACTATCACTCATCGGCTTAAGGTTTGGAAATTTTTTTTAAAGATAGAATGGTCAACTTTTTATGATGGACCCAAATTTAAAACCTATATCAATTATACATTTAACTGAGATTAGAAGGAAGGTAGAAAAAAAAAAAAAAAAAAAAAAGCCCACTTTTTAACCAACAATGAAAAATCTGAACTTAGAGATCAAAATGTTTCATCTCCTATAATTGTTAATTAACTTGATATTTTATGTTTTCCTAGTGGAATGCATTTAGTATTTTATATTAAATTTATATATTCTAAAAAATAATAAGAAAAAAGAGTATCCCAACGTGTCCATGTCCTAGGCTTTTTAAAATTGGCGTAGTGTCATATCCGTGTCCCCATCCGTGCTTCTTAGGTTAGAGTAAATGGTGTAGGTATAAGTTTATCCATTGAAATACTATTAACATAATAGAGTCGGCTTCGTAGTCCTCAACAGAGGCCTACTATTTAAATTATAGAATGTGCTTGATAGTCTTTAGGAGTTGGCTTTGCATCATATTTGCTTAAACATGTATGCATTATCTATATACTGTTATTGCTGTATTAACCAAATGTATCATATTGCATTTTTTTCTTATGATTTGGTTTCTCTCTGACTTCTCTGGATGTTCTTACCTTTCTGGCATTGCTCCCTTTAGTTAAACGTGTGATCACTATAATTACAACTGGGTTTTATGTTGTTGTATTACAAGGAGAAACAAAAGGCTTGAAAATGAGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGGAATGGAGAGCCAGCCAACGACGTGCAACCTTCTCAGAAATCCTATGGATCTTCTCAGCTGGTTGCTTCTACTTCGCCACTGACCGATAAACAGACACCGGCTGGCATTCCGGGGCATCTTACTAACAATTACTATAGAGCAGATGGGCAGAACTGTGGCAACTTTATCACGGTTAGCCTCCTTGTTTTACTTGTGTTGGCTTGCAATGTTTTGTGTTGATAGTTATTCACACAAGTATCCTGACCTTCCACTGTCATAAATATAACATCATAACTCATCAAAAGTCATCAAGTTGCAATGCTTGAGGAAGTGGAGAAATCATTTTTTCTCCCTTGACATGGGTTTTTACCATACTAATTCGTTAACTATACTAGTCTCGAAACTTTCGTAGAAATAACAATTTAGTTTTTGAACTTTAGTTAGTAACGATTTGGCCTGTATATTTACAAATCTGTAATAATTTGGTCTCTAAACTTCAATAACTAATATACGCAATAATTTAGTTCTTGTACTCTATAATTTTTAACGATTTAGTCCATATCAAAAAAATTAGTATGGGTTTTTACCATACTAATTCGTTAACTATATTAGTCTATGAACTTTCGTAGAAATAACAATTTAGTTTTTGAAATTTAGTTGGTAACGATTTAGCCTTTATTTTTACAAATCTGTAATAATTTGGTCTCTAAACTTCAATAACTAATATACGCAATAATTTAGTTCTTATACTCTATAATTTTTAACGATTTAGTCCATATCAAAAAAATTTGTAGGTTTTAATTAAAAAAAATTATACATAGATCAATAAATTGATCCGAGATCATTTTTTTTATAAACTATAAATAATAAGTTATTATGTAATAAAGTTTTTTGTTGAGATTTAACATAATAGGGACTAAGTTATAACAAATTTCAAAGTATAGTGATTAAATTGTTACTTGTTAAAGTTTAGGGACTAAATTGTTATAATTTGAAATTGCAAGGACTAAATCACTATTAACTATAGTTGAGGGACTAAATTGTTACGTCAATAAAAGTTCTAAGGGCAAAAGATGTTTAAGTTGGGTCAAAACTCAAAAGTGAAGGCAGAGAGGAGATAACTGAGGCCATACTTGAAAGAGAAGGGAATGAAACAGTAGGCAGGGAAGAATGTTGGACCAAAAATTAAGGTAGAGGGGAAACTACTGAAATAAAATAGGAAGATTGATTATGTTTCAGTAAACCAAAGGGTGAAAAAGACATTGTATCAGTTACATCTACATGAGGTTCTCACCTGCCCTTTTCTTAGAACTTCATTGTGGATAATGGATATAACCAAAGAAAACATTCTGGTAACAATAGATGTGCTCAAGAACATTAATTATTATATATGAATGAACTCAAATTTTGCAAAATACGGATGAGATCCTCAAAATACTACAGAAGCACATCCCTACTTCACAACTAACTTGGATGATACTTAAGGAGTCTTTGGTCCACTTACTTTCATAAGTTGGTGTTAAATAACCCAATTTCAACGGTGTTTACTATTGAAATTTACACTTTATCAAGAAATTTCATCTTCCCCTCTTTCCCTCTTCTAGACATTTATCAAGGAACTTTATTTTACGACTCTACACCCCAAACCTAAACTTAACTGTTTCAATATCAGGTATCATGAGAAAGATTCAAATTCCATTTTTAATATGAAGTTCTTGACATTGTTTTGTCCAAGTGTCCTGATTCTGAATCAATGGTTGATCATGGCTTTATTTCAATTTTGAATCCCCATTCATTTATAACCATTGGAATGTAAATGTTGGTGTATGTGCGAGCAGGATCGTCCATCGACCAAAGTTCATGCTGCACCTGGTGGCGGATCTTCTCTGGATTTCCTTTTCGGGAACGGTAGGAGCTAAGTTGGTTAAGTACCTAGAAAGACCCTTCACTGGCACTGGAACCTATCATATTATGTAAACTGAAAATTGTATCTACCCTTGAAAAGCTTAGAGCTTTTGTCTTTCAAATTTGTGGTATTTTTTTCTTTATGCACAAGGTTGTTTCCTCTTATGGTCAAAATTGCTGAAATGCTTGGTTCTTGATGCTATGTATTGAAACATAATTGAGTGGTTATTGCATATTGCTTTGCTCTCAATCTCTTGCATTTGCTGGCTATTGAACTTTTATGATTGGCTCATGCATTCTTTTAAAATTAAGGGCCAAGTGTATTTGTCACTATTCAAATTTTAAATTTTAATTTCTGAGACTGTCATTGTATATAGATTTTATGAATT

mRNA sequence

ATTTAACTAGCATCTTAGGCCTGTGCTGGGAAGACGTTCTGCTAGCTTCTTACATTTTGCTCTGTCTCTTCCTCTTGATCCCATTTTCATTTCGAGAAGATTTTCCAGGAGAAACAAAAGGCTTGAAAATGAGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGGAATGGAGAGCCAGCCAACGACGTGCAACCTTCTCAGAAATCCTATGGATCTTCTCAGCTGGTTGCTTCTACTTCGCCACTGACCGATAAACAGACACCGGCTGGCATTCCGGGGCATCTTACTAACAATTACTATAGAGCAGATGGGCAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAAGTTCATGCTGCACCTGGTGGCGGATCTTCTCTGGATTTCCTTTTCGGGAACGGTAGGAGCTAAGTTGGTTAAGTACCTAGAAAGACCCTTCACTGGCACTGGAACCTATCATATTATGTAAACTGAAAATTGTATCTACCCTTGAAAAGCTTAGAGCTTTTGTCTTTCAAATTTGTGGTATTTTTTTCTTTATGCACAAGGTTGTTTCCTCTTATGGTCAAAATTGCTGAAATGCTTGGTTCTTGATGCTATGTATTGAAACATAATTGAGTGGTTATTGCATATTGCTTTGCTCTCAATCTCTTGCATTTGCTGGCTATTGAACTTTTATGATTGGCTCATGCATTCTTTTAAAATTAAGGGCCAAGTGTATTTGTCACTATTCAAATTTTAAATTTTAATTTCTGAGACTGTCATTGTATATAGATTTTATGAATT

Coding sequence (CDS)

ATGAGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGGAATGGAGAGCCAGCCAACGACGTGCAACCTTCTCAGAAATCCTATGGATCTTCTCAGCTGGTTGCTTCTACTTCGCCACTGACCGATAAACAGACACCGGCTGGCATTCCGGGGCATCTTACTAACAATTACTATAGAGCAGATGGGCAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAAGTTCATGCTGCACCTGGTGGCGGATCTTCTCTGGATTTCCTTTTCGGGAACGGTAGGAGCTAA

Protein sequence

MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS

Homology

[Close]

BLAST of Bhi06G000273 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-27
Identity = 67/113 (59.29%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGE-----------PANDVQPSQKSYGSSQLVASTSPLTDK 60
           M RGVS GGGQSSLGYLFG+GE           P+++  P         + A T  +T K
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVT-K 60

Query: 61  QTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 103
           Q PAGI    TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]

BLAST of Bhi06G000273 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 62/108 (57.41%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGE----PANDVQPSQKSYGS----SQLVASTSPLTDKQTP 60
           M RGVS+GGGQSSLGYLFG+GE     A +  P++    +    +Q  A+ +  + KQ P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
           AG+  +  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGG 108

[Close]

BLAST of Bhi06G000273 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 62/108 (57.41%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGE----PANDVQPSQKSYGS----SQLVASTSPLTDKQTP 60
           M RGVS+GGGQSSLGYLFG+GE     A +  P++    +    +Q  A+ +  + KQ P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
           AG+  +  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGG 108

[Close]

BLAST of Bhi06G000273 vs. TAIR 10
Match: AT3G02180.1 (SPIRAL1-like3 )

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-23
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   SRGVSSGGGQSSLGYLFGNGEPAN------------DVQPSQKSYGSSQLVASTSPLTD- 61
           +RGV++G  +SSLGYLFG+G+P++                +    G   +  +T+ +TD 
Sbjct: 4   ARGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTDN 63

Query: 62  KQTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           K+T AG+ G   NNY+R++GQNCGNF+TDRPSTKVHAAPGGGSSLD+LFG
Sbjct: 64  KKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

[Close]

BLAST of Bhi06G000273 vs. TAIR 10
Match: AT3G02180.2 (SPIRAL1-like3 )

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-23
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   SRGVSSGGGQSSLGYLFGNGEPAN------------DVQPSQKSYGSSQLVASTSPLTD- 61
           +RGV++G  +SSLGYLFG+G+P++                +    G   +  +T+ +TD 
Sbjct: 4   ARGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTDN 63

Query: 62  KQTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           K+T AG+ G   NNY+R++GQNCGNF+TDRPSTKVHAAPGGGSSLD+LFG
Sbjct: 64  KKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

[Close]

BLAST of Bhi06G000273 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.1e-26
Identity = 67/113 (59.29%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGE-----------PANDVQPSQKSYGSSQLVASTSPLTDK 60
           M RGVS GGGQSSLGYLFG+GE           P+++  P         + A T  +T K
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVT-K 60

Query: 61  QTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 103
           Q PAGI    TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]

BLAST of Bhi06G000273 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24
Identity = 62/108 (57.41%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGE----PANDVQPSQKSYGS----SQLVASTSPLTDKQTP 60
           M RGVS+GGGQSSLGYLFG+GE     A +  P++    +    +Q  A+ +  + KQ P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
           AG+  +  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGG 108

[Close]

BLAST of Bhi06G000273 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-24
Identity = 64/104 (61.54%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQ---PSQKSYGSSQLVASTSPLTDKQTPAGIPG 60
           M RGVSSGGGQSSLGYLFG GE     +   P QK   SS    S   L  K+ PAGI  
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAPKSAEKPAPVQKPAPSS----SAEKL--KEIPAGIQS 60

Query: 61  HLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGR 102
              NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   +
Sbjct: 61  SKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNK 98

[Close]

BLAST of Bhi06G000273 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.5e-24
Identity = 63/109 (57.80%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 3   RGVSSGGGQSSLGYLFGNGE--PANDVQPSQKS--------YGSSQLVASTSPLTD---K 62
           RGVSSGGGQSSLGYLFG GE  PA   +P+  +           + + A+ SP      K
Sbjct: 5   RGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSAAEKMK 64

Query: 63  QTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           + PAGI     NNY+RA GQNCGNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 65  EIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFG 113

[Close]

BLAST of Bhi06G000273 vs. ExPASy Swiss-Prot
Match: Q9S7P8 (Protein SPIRAL1-like 3 OS=Arabidopsis thaliana OX=3702 GN=SP1L3 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.1e-22
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   SRGVSSGGGQSSLGYLFGNGEPAN------------DVQPSQKSYGSSQLVASTSPLTD- 61
           +RGV++G  +SSLGYLFG+G+P++                +    G   +  +T+ +TD 
Sbjct: 4   ARGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTDN 63

Query: 62  KQTPAGIPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           K+T AG+ G   NNY+R++GQNCGNF+TDRPSTKVHAAPGGGSSLD+LFG
Sbjct: 64  KKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

[Close]

BLAST of Bhi06G000273 vs. ExPASy TrEMBL
Match: A0A6J1JRI1 (protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 83/102 (81.37%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQTPAGIPGHLT 60
           M RGVSSGGGQSSLGYLFG GEPAN+VQ S+K  GSSQ  +STS   DK  PAGIPG+ T
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 103
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Bhi06G000273 vs. ExPASy TrEMBL
Match: A0A6J1GRA9 (protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 83/102 (81.37%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQTPAGIPGHLT 60
           M RGVSSGGGQSSLGYLFG GEPAN+VQ S+K  GSSQ  +STS   DK  PAGIPG+ T
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 103
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Bhi06G000273 vs. ExPASy TrEMBL
Match: A0A6J1BYY1 (protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 85/106 (80.19%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQ----TPAGIP 60
           M RGVSSGGGQSSLGYLFG GEPAN+VQ SQK  GSSQ  +ST+  TDK      PAGIP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 61  GHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 103
            + TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Bhi06G000273 vs. ExPASy TrEMBL
Match: B9IK91 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G095200 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33
Identity = 79/106 (74.53%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLV------ASTSPLTDKQTPAG 60
           M RGVS+GGGQSSLGYLFGNGEPAN+  P  K+ G+S  +      AS SP  DKQTPAG
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGEPANN-SPVAKNVGNSASISPSPKPASASPPIDKQTPAG 60

Query: 61  IPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
           I G+LTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G
Sbjct: 61  IHGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGG 105

[Close]

BLAST of Bhi06G000273 vs. ExPASy TrEMBL
Match: A0A4U5PU94 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000181920 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.9e-32
Identity = 77/104 (74.04%), Postives = 85/104 (81.73%), Query Frame = 0


Query: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLV------ASTSPLTDKQTPAG 60
           M RGVS+GGGQSSLGYLFGNGEPAN+  P  K+ G+S  +      AS SP  DKQTPAG
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGEPANN-SPVAKTVGNSASISPSPKPASASPPIDKQTPAG 60

Query: 61  IPGHLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           I G+LTNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61  IHGNLTNNYFRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 103

The following BLAST results are available for this feature:

BLAST of Bhi06G000273 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	2.9e-27	59.29	SPIRAL1-like1	[more]
AT1G69230.1	1.2e-25	57.41	SPIRAL1-like2	[more]
AT1G69230.2	1.2e-25	57.41	SPIRAL1-like2	[more]
AT3G02180.1	4.3e-23	50.91	SPIRAL1-like3	[more]
AT3G02180.2	4.3e-23	50.91	SPIRAL1-like3	[more]

BLAST of Bhi06G000273 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H4F1	4.1e-26	59.29	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	1.7e-24	57.41	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q2QQ99	5.0e-24	61.54	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
Q2R0W8	6.5e-24	57.80	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]
Q9S7P8	6.1e-22	50.91	Protein SPIRAL1-like 3 OS=Arabidopsis thaliana OX=3702 GN=SP1L3 PE=1 SV=1	[more]

BLAST of Bhi06G000273 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRI1	6.3e-38	81.37	protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1	[more]
A0A6J1GRA9	6.3e-38	81.37	protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1	[more]
A0A6J1BYY1	1.1e-37	80.19	protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1	[more]
B9IK91	3.6e-33	74.53	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G095200 PE=3 ...	[more]
A0A4U5PU94	3.9e-32	74.04	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000181920 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..59
None	No IPR available	PANTHER	PTHR33403:SF31	PROTEIN SPIRAL1-LIKE 1	coord: 1..99
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000273	Bhi06M000273	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis