Bhi06G000120 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000120
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RNA-binding protein 24
Location	chr6: 2983010 .. 2988898 (-)
RNA-Seq Expression	Bhi06G000120
Synteny	Bhi06G000120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTAAAATTTTCCATTTTAATTATTTTTTGGTATGTAAACTTTTGCTTTCCCTTCCCTCCTTCCCTTAGCCATCTCTCATTTCACTTTCTTCCTTTTGTTTTCATCTGTGACCTAATTCTCTATCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTTTCTCATCCTATTCCTCATTCCATCTCTCTTGATCTAACCCTTTCAAACACGAAATCTTGACACAAATTTAGGAAATAGTTTGTGGGATTTAAGAATCTGATCTTGCAAAGATTTCTGTTTTTTGTTTTTTTTTGGGTTTCTTTTTAAATTTTGAAGATCATGACTCCTTCTAATTTGGCAAGTCAATTTGGTGATACCACTTATACTAAGGTATTTGTTGGTGGGTTGGCTTGGGAAACTCACAAAGACACTATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAGGCTGTTGTTATTACTGACAAGGCCACTGGTCGATCCAAAGGCTATGGATTTGTACTCTTCTTTCTTTCCTTCTTATTTCTTTTTCTTTTATTTCCCCTTCTTTCTCGTAACTAAGGGTTTTCCTTTTTTTTCTTTTTTCTTTTTTCTTTTTACAGGTCACGTTTCGAGAACCCGATGCCGCCATGAGAGCTTGCGTTGATGCCGCTCCGGTCATCGATGGCCGACGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCTTCCACGCCTAAACACGGTATATTCTACTACACTTAGATCTACCCATTATTTCATTTGGTAACCATTTGATTCTTATTTTTCTTTTCTTTTCTTTCATAGTAAACAACTCTAAATATTTGCAAATATAGCACAACATACAAAAAAAAAATTACGAATATAAAAAAATTTAGATCCAACTCTGAGAATCAATCACTTATAGACTAGACCATATTCCTATAAGCTATCACTGATAAATTTTACTATATCTTAATTATTATTAACCTAAGTGGATAACAACTAAAAAATGAAATGATTTGATGTTTGGAATTGTGAAACATAAGTTATAAGAATATATATGTAAGTATGGTTGATTTGTTTTTGATGTGTTTAAAATTTGTGTTTTAAAGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAGGAGGAGGAGTAGGAGGAAGAAATTTTAGGGTATTGAGCTCAAATTTCCAGACTGGTTTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTTCCCTCATTATGCTATCCACCAAGGGATCCCTTACAATCTCTATGGGTAATTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTTTTTTTTTTTAAAAAAAAAAGAAAAATTCTCTATTTAATAATTTTATACTTTTGTTTATTTTTTCTCTCTCTACAACGTGACTTGCCAACTCATTTCTTCACTTTACTTTATGACTAACAATAAAGTCTTTTTTTTTTCCCTTCTTAATCACTCTAAATTATTTCATATTGTTTCCTCTTTAAGTTACTACTCATTTTATTTTCATCTTATTTATGCATTCAATTTACTGCATGCATGCCATTGCATGTATCTATCTACATTCATTAATTGGGTAGTTCAAAATTTTACTTCTTTTTAAATAAAGAAAATTGATAAATATAACAAATTTTCATTATCTATCAAAATCGATCACATTTTGTTGTAGTTGAAAGTATTTTAAGTAGTTTTATTATTTAAAATAATTATCCTAAAAATTTCTTGTTAATTAATTTATTATTCTTGGTGTTTTTTTTAGGTACTCTTCCTATTCGCCCGACTACACTTACCCCACGGTTTGTACAAACTTATCCTTTTATCTTTAAATTAAAAAATAAAATGGAATAGTTATTGGGAAGAAATAAATAAATAAATAATAGTAATAATAAAAGGGTTTTGTTGAAGAAAGATAGTAAAAAAAAATGGGTCACTTTTGAATATAAAAAAATAAATCAAAATATTTACAAAATATAGCAAAAATTTAAAACTATCAATGATCCATGTTGTTAGACACTGATAAATTTCTATCAGTGTCTATCAACGTCTATCATTCATAGTTCTGAAATTTTACTATATTCTATAAATATTTTCAGTAATTTTACCATTTAAAATAATTTTCCTACCCAAATTGTAATATTGGTTTGGGAGTGGAGAATGCTATAATTGGAAGTGAATTGAAATGAAGAATGTGTACATAATTTGTGGTCAAACTGTTGAAAAAGTGAAAGTTAGAGAGAACCAATCTGATGTTCCTTCTCTTGTCGTTTTATCCGACAGTTTTTGTTTCTTCATTTAATATTCTGTAACAGTAAATCACTTTAGTTACATTTTTTTTTTTTTTATTTTATTTTATGGGTCATTGTTACAGTTTTCGTTTTACACGTTCTTTCATGCACATAACCATGAAACTGCCTTCTCCAAGCCCACCATTTCAAATAGAAGAGAAAAATATTTTACATTTATTTTCCCACTAATCTTTGCGTATTTTATTAAATTATTTAATCATAATTTATAACTTGTTTTTTAAAATTTTTTTAGATGTGAATAGTAAAAAATGATGCACAAAAATAGGTAATATTCGAAATGCATTCAAGTATTTCATAATATATATATATATATATTTACCTTGTTTACTTTGTATTGAAATGAGATGCATGTGATTAGGCTGGACGTAATCATTAACTTGTATTGACTTTTATATATATATATATATATTTCTTTGTGATTGCATGGAGTTTGATATAATCTAGACACCACTTATTATTTATTTGAAATTTTGGAGACGTTTGGGGCAAAAATTATTTTAAGAGTATAATAACCACTTAAATATCATTTCAAAACCCTCAATTAACTACATTCAATATTATTTCAGAACCCTCATTTGCTACAACATTTACTATTTGGTACAGTTTTTACTATATTACATGTATCAATTTTTTATTCTTTGCTACAATTTTTATTATTTACTTCTCAAACTAAAATAGTTTACACCTTAAACACATACTATTATGATATAAACGAAAATAATCTACATTCTAAGTACAAAACATTATAACCTAACTATAATAAATTAGGACTATAACAACTAATTCTTTATCCCAAATGTCTCCTTTATATTTTAGTAAAAAAACACACATTAAACGGCTGAATTTTTATTCATGAATATGAAATATTATCAATTATCATGGACATAAGCTTAAAAAAAATGTGAATGAAAATGGGAAGGGTTTATTATTATTTATGTTTTGGGTTTTTCTGGATTAAATTTTCAGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCAATGTACGGTACGGGTCCCGGCGGCATATTGAGCGGAGCGGCGGCAGCAGCAGCGGCATTCTACCCTTATTTCCAATTCGGGGAAGGCAGCGGTGGCGGTGGTTCAGGGCAGCACGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGACGGCGATTAATTCAAGTGCTGCAACAACTTTCTCTCAGCATTATGCTGCTCCTCCTATGTCTCTGCCTCCCACGCCCCCCACCTTGCCATCAGGTTTGTTTACCCGTTTGATAATTATTTGTTTCTATGTATCAACATTTTCGATTGAAAAATAAAAAAAATAAGTAAACATATAAAAATGAATAGAGTTTATTCTTCAAAAACAGAAAATATAAAATAAAGATTTTAGCAAGATTACCATTTTGTTTGCACTCTCTCAATTTCTTTACTTTTTTTTTTTTTTTAATTCTCAAAACTTAACATGCAATTCAGATATCAAAAAATTGATTTTACACTTAGGGTTAATTCTAATTGCTTGGAAGAATGATTAGAAAAAGAATTAGGATACATTTTAAGAAATTAGAAAATAAATGTTAATAGGCTAAGGCTTTCATAAATTTCTAAAAATAACTGACTAAACTTTTCTTTTTCCCTCAACTCGTTAAGTATTATGTCGTATCATCTAACTATTGGTTGTATTTATACATCCAATAACTCAAGAAATCATCTAATAAGTAAATATATTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTAAGTTGGGAAAAATGTGAAAGAAAGACATACTAATATCTTTGACAGTGTTTTTTGCTATTCCACAGGCGTGACCATGGCTCTTCCTGCACCAATCCCACATCGCTAGAGACAACAAATCTCATCATCTTCAAAATTCCTTCAAATTTGTCCCCTCACTCATCACTTAAATTCAACTCAGCCTTCGCCCTAACCATGGTTAAGTCAATCTCTTTCTCTCTAACTCATGCCTTTACAGGCCAATCCGAGCCCTCCATAGGGGCTTCCTCAATCCAACCATACCAAATCTCACCCCTCCAAAATTGGAGCAAAAATCATGCATTTCTATTTTTTTTTTATTAATCATATTAATTAGGGTTTAGAGAAAAAGAAGGGTGAAAGTGGTTCCTTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAAAAAAAAAAAAAAAAAACCAATTTAGGTCATCAAGGGAATTGGCCTTTAAGTTGGTGAAATTTGCACATAACTTTTGTTTTTTAATCTTCAAAGCCTAGGAAAGACTTTAAGGATATAACAAAAATGAAAAACATTTTTCCCAAAAAAAAAAAAAAATCATTGTATATTTTATTCTAAATACCACACCCTCCTTTTTCTCAATTCCATCACTTTGAAAAAATTGGACTGAAAAAAGGGTAATATTTTTCTAATCATCATTGTAATTAAATTTCAATTAGGGAGTAATTAGATGGAGAACTTTTCAAGAAATTGGTGGGGGCAAGGGCTGCCCCTACCTTTGTCTTAAAATAGTAGTAGTTTTTTCAAAGATTAGGACCAATCACCAATCTTTAAATTTTTCCTCTTTAGTTTAGTGGAATTTTTTTTTTTTTACCCAATTAATTTAGTTGACATATTATTTCCCTTTGGTTTGGGGAATAATACTAAATCTCTTTGATTAATTAACCCTTAGCACATTAGTTATTTCTTGTAATTAAAATTTTCACCAACAATCGTGGTTGAACTTATGGGAGTTTACAACCATGTTTATTTTTGGTAAACCAAAGCACAAATATTGCTTTTTGGTTTAACTTTTTTTTTTTTTTGGTGCATTTAGGTTTCATAATTAGAAATTAATTAGGGATTAGGGTTTAAGCATGTCATGATTTTGAGATTCCATTAATGGATATTGGAAGTCTCAAAATAAGCATTTTGCATGTTAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTCTTCTTTCACACTAACCCTACCAACCAACCAACCAACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTTTCTTCACCATGTTGCCTTTTCATAATTTCTTCACTATTCCCATTTTACCCTCTTTCATGTCATCCCCAATCATCTTCCTTTGGCTGTCTTCTTCTTCTTCTTCTCTTCTTCATGTGTCTGTGTGTTCAAGTTAGCACTTTCTCTTCATGGAGTAGGTGGGACCTTGGAAACACTTTTTCTTTTTTTTTTTTTTTTTTTAATTTTTTCTTTAAAAAAAGGGCCTTTTTCCTTTTTTTTTTTTTTTTTTCTTAATGTCTTTTCATGGTTTGTAATGTAATTAGATGCTTTAATTACTATCCTTTCTTTTATGTCAGGACTTCTACTAAGATTCAGTTCTTCATCAGCTGCTCCTTTGCAGCTGCTTGAAGAATAACCTATGTACCTCAATATTAATTGCTTCTTTCTTTCTGCTCTCTCTATTCTCTTCTTTTTATTGAACTGATGAGTTGGTCTTTTTGAGCATTA

mRNA sequence

TTTAATTAAAATTTTCCATTTTAATTATTTTTTGGTATGTAAACTTTTGCTTTCCCTTCCCTCCTTCCCTTAGCCATCTCTCATTTCACTTTCTTCCTTTTGTTTTCATCTGTGACCTAATTCTCTATCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTTTCTCATCCTATTCCTCATTCCATCTCTCTTGATCTAACCCTTTCAAACACGAAATCTTGACACAAATTTAGGAAATAGTTTGTGGGATTTAAGAATCTGATCTTGCAAAGATTTCTGTTTTTTGTTTTTTTTTGGGTTTCTTTTTAAATTTTGAAGATCATGACTCCTTCTAATTTGGCAAGTCAATTTGGTGATACCACTTATACTAAGGTATTTGTTGGTGGGTTGGCTTGGGAAACTCACAAAGACACTATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAGGCTGTTGTTATTACTGACAAGGCCACTGGTCGATCCAAAGGCTATGGATTTGTCACGTTTCGAGAACCCGATGCCGCCATGAGAGCTTGCGTTGATGCCGCTCCGGTCATCGATGGCCGACGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCTTCCACGCCTAAACACGGAGGAGGAGGAGGAGGAGGAGGAGTAGGAGGAAGAAATTTTAGGGTATTGAGCTCAAATTTCCAGACTGGTTTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTTCCCTCATTATGCTATCCACCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCCACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCAATGTACGGTACGGGTCCCGGCGGCATATTGAGCGGAGCGGCGGCAGCAGCAGCGGCATTCTACCCTTATTTCCAATTCGGGGAAGGCAGCGGTGGCGGTGGTTCAGGGCAGCACGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGACGGCGATTAATTCAAGTGCTGCAACAACTTTCTCTCAGCATTATGCTGCTCCTCCTATGTCTCTGCCTCCCACGCCCCCCACCTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATCCCACATCGCTAGAGACAACAAATCTCATCATCTTCAAAATTCCTTCAAATTTGTCCCCTCACTCATCACTTAAATTCAACTCAGCCTTCGCCCTAACCATGGTTAAGTCAATCTCTTTCTCTCTAACTCATGCCTTTACAGGCCAATCCGAGCCCTCCATAGGGGCTTCCTCAATCCAACCATACCAAATCTCACCCCTCCAAAATTGGAGCAAAAATCATGCATTTCTATTTTTTTTTTATTAATCATATTAATTAGGGTTTAGAGAAAAAGAAGGGTGAAAGTGGTTCCTTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAAAAAAAAAAAAAAAAAACCAATTTAGGTCATCAAGGGAATTGGCCTTTAAGTTGGTGAAATTTGCACATAACTTTTGTTTTTTAATCTTCAAAGCCTAGGAAAGACTTTAAGGATATAACAAAAATGAAAAACATTTTTCCCAAAAAAAAAAAAAAATCATTGTATATTTTATTCTAAATACCACACCCTCCTTTTTCTCAATTCCATCACTTTGAAAAAATTGGACTGAAAAAAGGGTAATATTTTTCTAATCATCATTGTAATTAAATTTCAATTAGGGAGTAATTAGATGGAGAACTTTTCAAGAAATTGGTGGGGGCAAGGGCTGCCCCTACCTTTGTCTTAAAATAGTAGTAGTTTTTTCAAAGATTAGGACCAATCACCAATCTTTAAATTTTTCCTCTTTAGTTTAGTGGAATTTTTTTTTTTTTACCCAATTAATTTAGTTGACATATTATTTCCCTTTGGTTTGGGGAATAATACTAAATCTCTTTGATTAATTAACCCTTAGCACATTAGTTATTTCTTGTAATTAAAATTTTCACCAACAATCGTGGTTGAACTTATGGGAGTTTACAACCATGTTTATTTTTGGTAAACCAAAGCACAAATATTGCTTTTTGGTTTAACTTTTTTTTTTTTTTGGTGCATTTAGGTTTCATAATTAGAAATTAATTAGGGATTAGGGTTTAAGCATGTCATGATTTTGAGATTCCATTAATGGATATTGGAAGTCTCAAAATAAGCATTTTGCATGTTAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTCTTCTTTCACACTAACCCTACCAACCAACCAACCAACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTTTCTTCACCATGTTGCCTTTTCATAATTTCTTCACTATTCCCATTTTACCCTCTTTCATGTCATCCCCAATCATCTTCCTTTGGCTGTCTTCTTCTTCTTCTTCTCTTCTTCATGTGTCTGTGTGTTCAAGTTAGCACTTTCTCTTCATGGAGTAGGTGGGACCTTGGAAACACTTTTTCTTTTTTTTTTTTTTTTTTTAATTTTTTCTTTAAAAAAAGGGCCTTTTTCCTTTTTTTTTTTTTTTTTTCTTAATGTCTTTTCATGGTTTGTAATGTAATTAGATGCTTTAATTACTATCCTTTCTTTTATGTCAGGACTTCTACTAAGATTCAGTTCTTCATCAGCTGCTCCTTTGCAGCTGCTTGAAGAATAACCTATGTACCTCAATATTAATTGCTTCTTTCTTTCTGCTCTCTCTATTCTCTTCTTTTTATTGAACTGATGAGTTGGTCTTTTTGAGCATTA

Coding sequence (CDS)

ATGACTCCTTCTAATTTGGCAAGTCAATTTGGTGATACCACTTATACTAAGGTATTTGTTGGTGGGTTGGCTTGGGAAACTCACAAAGACACTATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAGGCTGTTGTTATTACTGACAAGGCCACTGGTCGATCCAAAGGCTATGGATTTGTCACGTTTCGAGAACCCGATGCCGCCATGAGAGCTTGCGTTGATGCCGCTCCGGTCATCGATGGCCGACGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCTTCCACGCCTAAACACGGAGGAGGAGGAGGAGGAGGAGGAGTAGGAGGAAGAAATTTTAGGGTATTGAGCTCAAATTTCCAGACTGGTTTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTTCCCTCATTATGCTATCCACCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCCACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCAATGTACGGTACGGGTCCCGGCGGCATATTGAGCGGAGCGGCGGCAGCAGCAGCGGCATTCTACCCTTATTTCCAATTCGGGGAAGGCAGCGGTGGCGGTGGTTCAGGGCAGCACGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCGACGGCGATTAATTCAAGTGCTGCAACAACTTTCTCTCAGCATTATGCTGCTCCTCCTATGTCTCTGCCTCCCACGCCCCCCACCTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATCCCACATCGCTAG

Protein sequence

MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFGGNVGSAFHSPTTFPHYAIHQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

Homology

[Close]

BLAST of Bhi06G000120 vs. TAIR 10
Match: AT1G33470.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 261.2 bits (666), Expect = 9.9e-70
Identity = 157/266 (59.02%), Postives = 188/266 (70.68%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFG 131
           +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      G VGGR  +V +S F+T F 
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH------GHVGGRGMKV-TSPFKTHF- 122

Query: 132 GNVGSAFHSPTTFPHYAIHQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG 191
           G   +A  SP  F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMYG+G
Sbjct: 123 GTAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMYGSG 182

Query: 192 PGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYG-VQYPHHLFQYSTAINSSAATTFS 251
           P  +   AAA AA FYPY QF EG+G       GY  + YP+H+F Y      SA     
Sbjct: 183 P--MTGVAAAPAAGFYPYLQFAEGNG----PVTGYAPLHYPNHMFHY------SAPGGNY 242

Query: 252 QHYAAPPMSLPPTPPTLPSGVTMALP 276
            H+   P+SL P+ P +PS V  A+P
Sbjct: 243 PHHNGSPVSLAPS-PVIPS-VCFAVP 242

[Close]

BLAST of Bhi06G000120 vs. TAIR 10
Match: AT1G33470.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-68
Identity = 157/267 (58.80%), Postives = 188/267 (70.41%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFG 131
           +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      G VGGR  +V +S F+T F 
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH------GHVGGRGMKV-TSPFKTHF- 122

Query: 132 GNVGSAFHSPTTFPHYAIHQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGT 191
           G   +A  SP  F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYG+
Sbjct: 123 GTAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHPMYGS 182

Query: 192 GPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYG-VQYPHHLFQYSTAINSSAATTF 251
           GP  +   AAA AA FYPY QF EG+G       GY  + YP+H+F Y      SA    
Sbjct: 183 GP--MTGVAAAPAAGFYPYLQFAEGNG----PVTGYAPLHYPNHMFHY------SAPGGN 242

Query: 252 SQHYAAPPMSLPPTPPTLPSGVTMALP 276
             H+   P+SL P+ P +PS V  A+P
Sbjct: 243 YPHHNGSPVSLAPS-PVIPS-VCFAVP 243

[Close]

BLAST of Bhi06G000120 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-62
Identity = 144/253 (56.92%), Postives = 165/253 (65.22%), Query Frame = 0


Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGF 130
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP HGGGG        N RV+ S  QTGF
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGG-----RINNMRVMMSTMQTGF 127

Query: 131 GGNVGSAFHSPTTFPHYAIHQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG 190
           G         P TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG
Sbjct: 128 GPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYG 187

Query: 191 --TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAAT 250
                GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+         
Sbjct: 188 NRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN--------- 232

Query: 251 TFSQHYAAPPMSL 260
               HY+ P  S+
Sbjct: 248 --PHHYSPPTFSM 232

[Close]

BLAST of Bhi06G000120 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.4e-62
Identity = 148/268 (55.22%), Postives = 170/268 (63.43%), Query Frame = 0


Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGF 130
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP HGGGG        N RV+ S  QTGF
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGG-----RINNMRVMMSTMQTGF 127

Query: 131 GGNVGSAFHSPTTFPHYAIHQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG 190
           G         P TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG
Sbjct: 128 GPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYG 187

Query: 191 --TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAAT 250
                GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+         
Sbjct: 188 NRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN--------- 247

Query: 251 TFSQHYAAPPMSL-------PPTPPTLP 268
               HY+ P  S+       P  PP +P
Sbjct: 248 --PHHYSPPTFSMQQGVTGFPLQPPLIP 247

[Close]

BLAST of Bhi06G000120 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 232.3 bits (591), Expect = 4.9e-61
Identity = 147/272 (54.04%), Postives = 170/272 (62.50%), Query Frame = 0


Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGF 130
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP HGGGG        N RV+ S  QTGF
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGG-----RINNMRVMMSTMQTGF 127

Query: 131 GGNVGSAFHSPTTFPHYAIHQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG 190
           G         P TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG
Sbjct: 128 GPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYG 187

Query: 191 --TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAAT 250
                GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+         
Sbjct: 188 NRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN--------- 247

Query: 251 TFSQHYAAPPMSLPPTPPTLPSGVTMALPAPI 279
               HY+ P  S+        S  T +   P+
Sbjct: 248 --PHHYSPPTFSMQQGSRNRLSASTTSYSLPL 251

[Close]

BLAST of Bhi06G000120 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.1e-28
Identity = 94/244 (38.52%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 2   TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGF 61
           T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGF
Sbjct: 3   TSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGF 62

Query: 62  VTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPST-------PKHGGGGGGGGV 121
           VTF++  AA RAC D+ P+I+GRRANCNLASLG +  K  T       PK+G       V
Sbjct: 63  VTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQGPKNGNRATPPHV 122

Query: 122 GGRNFRVLSSNFQTGFGGNVGSAFHSPTTFPH-YAIHQGIPYNLYGYSS--YSPDYTYPT 181
           G  +     S F               T   H    HQ +P+  YGY S   +P+ T+  
Sbjct: 123 GNHSQWYYPSGF---------------TNQQHQQQNHQAVPF--YGYPSAYVAPNMTFNQ 182

Query: 182 -------SYYNVYGGATAQYPM----------YGTGPGGILSGAAAAAAAFYPYFQFGEG 219
                  +Y N Y       P           +  G G ++ GAA+    FY  + + + 
Sbjct: 183 KVGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQS 229

[Close]

BLAST of Bhi06G000120 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.4e-25
Identity = 92/239 (38.49%), Postives = 119/239 (49.79%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFG 131
           RAC D  P+IDGR+AN NLA LG   +KP                   R++   F  G  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP-------------------RIMQPGFAFGVQ 126

Query: 132 GNVGSAFHSPTTFP-HYAIHQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYG 191
               +    P   P HY   Q    P  +  +   +      T Y +  G A AQY    
Sbjct: 127 QLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQY---- 186

Query: 192 TGPGGILSGAAAAAAAF--YPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAA 246
                  + AAAAAAA+  YPY      +G   +G +GY VQ P       TA  ++AA
Sbjct: 187 ----SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 215

[Close]

BLAST of Bhi06G000120 vs. ExPASy Swiss-Prot
Match: Q76LC6 (RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 92/244 (37.70%), Postives = 117/244 (47.95%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFG 131
           RAC D  P+IDGR+AN NLA LG   +KP                   RV+   F  G  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP-------------------RVMQPGFTFGVP 126

Query: 132 GNVGSAFHSPTTFP-HYAIHQGIPYNLYGYSSYSPDYTYPTS---YYNVYGGATAQYPMY 191
               +    P   P HY   Q             P  T  T+   Y +  G A AQY   
Sbjct: 127 QIHPAFIQRPYGIPTHYVYPQAFMQPSVVIPHIQPTATSATASSPYIDYTGAAYAQYASA 186

Query: 192 GTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAATT 251
            T        AAAAA   YPY      +G   +  +GY +Q P  L   +    ++AA  
Sbjct: 187 AT-------AAAAAAYEQYPYAASPAATGYVAAAGYGYAMQQP--LATAAPGSAAAAAAA 219

[Close]

BLAST of Bhi06G000120 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 92/239 (38.49%), Postives = 118/239 (49.37%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFG 131
           RAC D  P+IDGR+AN NLA LG   +KP                   R++   F  G  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP-------------------RIMQPGFAFGVQ 126

Query: 132 GNVGSAFHSPTTFP-HYAIHQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYG 191
               +    P   P HY   Q    P  +  +   +      T Y +  G A AQY    
Sbjct: 127 QLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQY---- 186

Query: 192 TGPGGILSGAAAAAAAF--YPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTAINSSAA 246
                  + AAAAAAA+  YPY      +G   +G + Y VQ P       TA  ++AA
Sbjct: 187 ----SAAAAAAAAAAAYDQYPYAASPAAAGYVTTGGYSYAVQQPITAAAPGTAAAAAAA 215

[Close]

BLAST of Bhi06G000120 vs. ExPASy Swiss-Prot
Match: Q5ZMA3 (RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 8.0e-24
Identity = 93/244 (38.11%), Postives = 117/244 (47.95%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFRVLSSNFQTGFG 131
           RAC D  P+IDGR+AN NLA LG   +KP                   R++   F  G  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP-------------------RIMQPGFAFGVQ 126

Query: 132 GNVGSAFHSPTTFP-HYAIHQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYG 191
               +    P   P HY   Q    P  +  +   +      T Y    G A AQY    
Sbjct: 127 QLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPAAAAASTTPYIGYTGAAYAQY---- 186

Query: 192 TGPGGILSGAAAAAAAFYPYFQFGEGSGG-GGSGQHGYGVQYPHHLFQYSTAINSSAATT 251
                    AAAAA   YPY      + G   +G +GY VQ P       TA  ++AA  
Sbjct: 187 --------SAAAAAYEQYPYAASPAAAAGYVAAGGYGYAVQQPITAAAPGTA--AAAAAA 214

[Close]

BLAST of Bhi06G000120 vs. ExPASy TrEMBL
Match: A0A1S4E2E8 (RNA-binding protein 24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.7e-146
Identity = 267/282 (94.68%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFR 120
           FVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKPSTPKHGGGG     G  NFR
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHGGGG-----GRNNFR 120

Query: 121 VLSSNFQTGFGGNVGSAFHSP-TTFPHYAIHQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           VLSSNFQ+GFGGNVGSAFHSP TTFPHYAI QGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 VLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTA 240
           ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS A
Sbjct: 181 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAA 240

Query: 241 INSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 282
           INS+AATTF QHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 INSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 277

[Close]

BLAST of Bhi06G000120 vs. ExPASy TrEMBL
Match: A0A1S4E2E1 (RNA-binding protein 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143
Identity = 266/285 (93.33%), Postives = 269/285 (94.39%), Query Frame = 0


Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGG---GGGGVGGR 120
           FVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKPSTPKH        GGG G  
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQTGFGGNVGSAFHSP-TTFPHYAIHQGIPYNLYGYSSYSPDYTYPTSYYNV 180
           NFRVLSSNFQ+GFGGNVGSAFHSP TTFPHYAI QGIPYNLYGYSSYSPDYTYPTSYYNV
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNV 180

Query: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQY 240
           YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQY
Sbjct: 181 YGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQY 240

Query: 241 STAINSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 282
           S AINS+AATTF QHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 SAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285

[Close]

BLAST of Bhi06G000120 vs. ExPASy TrEMBL
Match: A0A1S4E2D8 (RNA-binding protein 24 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.6e-139
Identity = 257/276 (93.12%), Postives = 261/276 (94.57%), Query Frame = 0


Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFR 120
           FVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKPSTPKHGGGG     G  NFR
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHGGGG-----GRNNFR 120

Query: 121 VLSSNFQTGFGGNVGSAFHSP-TTFPHYAIHQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           VLSSNFQ+GFGGNVGSAFHSP TTFPHYAI QGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 VLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYPHHLFQYSTA 240
           ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS A
Sbjct: 181 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAA 240

Query: 241 INSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALP 276
           INS+AATTF QHYAAPPMSLPPTPPTLPS V  A+P
Sbjct: 241 INSTAATTFPQHYAAPPMSLPPTPPTLPS-VFFAIP 270

[Close]

BLAST of Bhi06G000120 vs. ExPASy TrEMBL
Match: A0A6J1IAD7 (RNA-binding protein 24 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139
Identity = 259/287 (90.24%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFR 120
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGG      GGRNFR
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGG------GGRNFR 120

Query: 121 VLSSNFQTGFGGNVGSAFHSPTTFPHYAIHQGIPYNLYGYSSYSPDYTYPTSYYNVYGGA 180
           VLSS FQTGFGGNVGSAFHS  TFPHYAIHQGIPYNLYGYSSYSPDY YPTSYYNVYGGA
Sbjct: 121 VLSS-FQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVYGGA 180

Query: 181 TAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGG------GGSGQHGYGVQYPHHLF 240
           TAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGG      GGSGQ GYGVQYPHHL 
Sbjct: 181 TAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLL 240

Query: 241 QYSTAINSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 282
           QYS A+NS+  TTF QHYAAPPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 QYSAALNST-PTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 279

[Close]

BLAST of Bhi06G000120 vs. ExPASy TrEMBL
Match: A0A6J1EQ81 (RNA-binding protein 24 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111436682 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139
Identity = 259/287 (90.24%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGGVGGRNFR 120
           FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGG      GGRNFR
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGG------GGRNFR 120

Query: 121 VLSSNFQTGFGGNVGSAFHSPTTFPHYAIHQGIPYNLYGYSSYSPDYTYPTSYYNVYGGA 180
           VLSS FQTGFGGNVGSAFHS  TFPHYAIHQGIPYNLYGYSSYSPDY YPTSYYNVYGGA
Sbjct: 121 VLSS-FQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVYGGA 180

Query: 181 TAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGG------GGSGQHGYGVQYPHHLF 240
           TAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGG      GGSGQ GYGVQYPHHL 
Sbjct: 181 TAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLL 240

Query: 241 QYSTAINSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 282
           QYS A+NS+  TTF QHYAAPPMSLPPTPPTLPSGVTMALP PIPHR
Sbjct: 241 QYSAALNST-PTTFPQHYAAPPMSLPPTPPTLPSGVTMALPTPIPHR 279

The following BLAST results are available for this feature:

BLAST of Bhi06G000120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33470.2	9.9e-70	59.02	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G33470.1	2.4e-68	58.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.2	2.0e-62	56.92	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.1	3.4e-62	55.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.3	4.9e-61	54.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Bhi06G000120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	9.1e-28	38.52	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q9BX46	9.4e-25	38.49	RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1	[more]
Q76LC6	1.6e-24	37.70	RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1	[more]
D3Z4I3	1.6e-24	38.49	RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1	[more]
Q5ZMA3	8.0e-24	38.11	RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2	[more]

BLAST of Bhi06G000120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2E8	1.7e-146	94.68	RNA-binding protein 24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S...	[more]
A0A1S4E2E1	1.0e-143	93.33	RNA-binding protein 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S...	[more]
A0A1S4E2D8	4.6e-139	93.12	RNA-binding protein 24 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S...	[more]
A0A6J1IAD7	7.8e-139	90.24	RNA-binding protein 24 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE...	[more]
A0A6J1EQ81	7.8e-139	90.24	RNA-binding protein 24 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111436682 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 17..89 e-value: 1.2E-21 score: 88.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 18..73 e-value: 1.7E-15 score: 56.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 16..100 score: 16.551298
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..116 e-value: 4.1E-24 score: 87.1
None	No IPR available	PANTHER	PTHR11176:SF16	OS01G0876800 PROTEIN	coord: 1..276
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 16..91 e-value: 3.23015E-41 score: 135.05
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 1..276
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 7..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000120	Bhi06M000120	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding