Bhi05G000760 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000760
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPeriaxin-like
Locationchr5: 32190293 .. 32191229 (-)
RNA-Seq ExpressionBhi05G000760
SyntenyBhi05G000760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTGTAAATTTACCATGTAATAAGATACTACATAGAAACACCATTACAAAACAAATTTTTATTCATAACATAATGTGTCTTTATAAGTATAGAAGACGAACACTATATAACTACAATAACACATTGATAAAAATAGAAACAACCTATATAAAAATCTCATACTTATCCGAAGGGATAATTAAAAGGAGAAACAAAAGATAATATAGTTTTCACTGTCGTATATAAATATATATTTAATTAAACTGTTGTAGATAGAATATGCTATTCATGGGTTTGTGGTTGTGTGGGGTGGGTTCAATGAAGGGAAAGGTATGTCCTTTGGAATGGTAGGGAGAATTGGCTTTGGGAGAGGTGGCAATTCAGGTAACTTAGGGAGTTCTGGTTTAGGTAAATTTGGTAATTCTGGTAACTTGGAAACCTCAGGTTTTGGCACATTTGGTAATTCAGGTAATTTTGGGAGCTCGTGTTTTGGTAGATTTGAAGCTTCAGACAGTTTGGGAAGATCAAACTTAGGCAAGCTTGGAACTTCTGGAAATTTGGGGAGATCAAGCTTCGATACTTCCGGTAATTCAAGCGACTTTGGGAGTTCAGGCTTTGGAAATTCAGGTACTTTAGGCTTTTCAAAGGGTGGAAGATGAGGCAATGGAGGTAACTCAACCTTTGGCAGTGGAGGAAGCTCAGGTTTTTGCAAGGTTGGTATTTTTGGTTTTGGAAGGTCTTCTGGTACCTTAGGTAATGGGGTCTCCAAGAGATGCCTTGCGTTCACTGTCATAACCAAATAATCAAAATTTATCAATAGAAAAGTACCGAGTATCACAGAAAATACAAAGGTTGAGAAGCGAAGAATAGCCATCGAAGTTTTAAAATGATTAGAAGATCACAATAACAAAATATTTTAGATTGTGGATTTAGAAATTATGAACTCGATTTGGTTAT

mRNA sequence

TCTTGTAAATTTACCATGTAATAAGATACTACATAGAAACACCATTACAAAACAAATTTTTATTCATAACATAATGTGTCTTTATAAGTATAGAAGACGAACACTATATAACTACAATAACACATTGATAAAAATAGAAACAACCTATATAAAAATCTCATACTTATCCGAAGGGATAATTAAAAGGAGAAACAAAAGATAATATAGTTTTCACTGTCGTATATAAATATATATTTAATTAAACTGTTGTAGATAGAATATGCTATTCATGGGTTTGTGGTTGTGTGGGGTGGGTTCAATGAAGGGAAAGGTATGTCCTTTGGAATGGTAGGGAGAATTGGCTTTGGGAGAGGTGGCAATTCAGGTAACTTAGGGAGTTCTGGTTTAGGTAAATTTGGTAATTCTGGTAACTTGGAAACCTCAGGTTTTGGCACATTTGGTAATTCAGGTAATTTTGGGAGCTCGTGTTTTGGTAGATTTGAAGCTTCAGACAGTTTGGGAAGATCAAACTTAGGCAAGCTTGGAACTTCTGGAAATTTGGGGAGATCAAGCTTCGATACTTCCGGTAATTCAAGCGACTTTGGGAGTTCAGGCTTTGGAAATTCAGGTACTTTAGGCTTTTCAAAGGGTGGAAGATGAGGCAATGGAGGTAACTCAACCTTTGGCAGTGGAGGAAGCTCAGGTTTTTGCAAGGTTGGTATTTTTGGTTTTGGAAGGTCTTCTGGTACCTTAGGTAATGGGGTCTCCAAGAGATGCCTTGCGTTCACTGTCATAACCAAATAATCAAAATTTATCAATAGAAAAGTACCGAGTATCACAGAAAATACAAAGGTTGAGAAGCGAAGAATAGCCATCGAAGTTTTAAAATGATTAGAAGATCACAATAACAAAATATTTTAGATTGTGGATTTAGAAATTATGAACTCGATTTGGTTAT

Coding sequence (CDS)

ATGTCCTTTGGAATGGTAGGGAGAATTGGCTTTGGGAGAGGTGGCAATTCAGGTAACTTAGGGAGTTCTGGTTTAGGTAAATTTGGTAATTCTGGTAACTTGGAAACCTCAGGTTTTGGCACATTTGGTAATTCAGGTAATTTTGGGAGCTCGTGTTTTGGTAGATTTGAAGCTTCAGACAGTTTGGGAAGATCAAACTTAGGCAAGCTTGGAACTTCTGGAAATTTGGGGAGATCAAGCTTCGATACTTCCGGTAATTCAAGCGACTTTGGGAGTTCAGGCTTTGGAAATTCAGGTACTTTAGGCTTTTCAAAGGGTGGAAGATGA

Protein sequence

MSFGMVGRIGFGRGGNSGNLGSSGLGKFGNSGNLETSGFGTFGNSGNFGSSCFGRFEASDSLGRSNLGKLGTSGNLGRSSFDTSGNSSDFGSSGFGNSGTLGFSKGGR
Homology
BLAST of Bhi05G000760 vs. ExPASy TrEMBL
Match: A0A5J5RWY7 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D04G179500v1 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06
Identity = 56/106 (52.83%), Postives = 61/106 (57.55%), Query Frame = 0

Query: 2   SFGMVGRIGFGRGGNSGNLGSSGLGKFGNSGNLETSGF---GTFGNSGNFGSSCFGRFEA 61
           +FG +G  GFG  G  GN G    G FGNSG L +SGF   GTFGNSG  G+S FG    
Sbjct: 10  NFGTLGNSGFGNSGTLGNSGFGNSGTFGNSGTLGSSGFGNSGTFGNSGTLGNSGFGN--- 69

Query: 62  SDSLGRSNLGKLGTSGNLGRSSFDTSGNSSDFGSSGFGNSGTLGFS 105
           S +LG S     G SG LG S F  SGNS  FGSS FG  G LG S
Sbjct: 70  SGTLGNSG---FGNSGILGISGFGISGNSG-FGSSTFGKDGILGNS 108

BLAST of Bhi05G000760 vs. ExPASy TrEMBL
Match: A0A5J5RXQ0 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D04G179500v1 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05
Identity = 56/110 (50.91%), Postives = 62/110 (56.36%), Query Frame = 0

Query: 4   GMVGRIGF---GRGGNSGNLGSSGL---GKFGNSGNLETSGFGTFGNSGNFGSSCFGRFE 63
           G++G  GF   G  GNSG  G+SGL   G FGNSG L  SG GT   SG  G+S FG  E
Sbjct: 29  GILGNSGFVNSGIFGNSGAFGNSGLGTSGTFGNSGALGNSGLGT---SGTLGNSGFGNPE 88

Query: 64  ASDSLGRSNLGKLGTSGNLGRSSFDTSG---NSSDFGSSGFGNSGTLGFS 105
              +    NLG LG SG LG S   TS    NS   G+SGFGNSGT G S
Sbjct: 89  TFGASDFDNLGALGISGTLGNSGTLTSSGFFNSGTLGNSGFGNSGTFGNS 135

BLAST of Bhi05G000760 vs. ExPASy TrEMBL
Match: A0A5D2GXL0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A04G154400v1 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05
Identity = 54/106 (50.94%), Postives = 57/106 (53.77%), Query Frame = 0

Query: 4   GMVGRIGFGRGGNSGNLGSSGLGKFGNSG-----NLETSGFGTFGNSGNFGSSCFGRFEA 63
           G++G  GFG  G  GN G    G FGNSG      L  SGFGT G  GN G    G F  
Sbjct: 17  GVLGNSGFGNSGAFGNSGLGTSGTFGNSGFGNSVTLGNSGFGTSGILGNSGFVNSGIFGN 76

Query: 64  SDSLGRSNLGKLGTSGNLGRSSFDTSGNSSDFGSSGFGNSGTLGFS 105
           S +LG S    LGTSG LG S F   GNS  FG S FGNSG LG S
Sbjct: 77  SGALGNSG---LGTSGTLGNSGF---GNSGTFGDSSFGNSGALGNS 116

BLAST of Bhi05G000760 vs. ExPASy TrEMBL
Match: A0A5D2R0C3 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G153800v1 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 54/110 (49.09%), Postives = 59/110 (53.64%), Query Frame = 0

Query: 4   GMVGRIGFGRGGNSGNLGSS---GLGKFGNSGNLETSGFGTFGNSGNFGSSCFGRFEASD 63
           G  G +G  R GNSG  G+S    LG  G SG L +SGF   G  GN G    G FE S 
Sbjct: 124 GTSGTLGNSRFGNSGTFGASDFDNLGALGISGTLTSSGFFNSGILGNSGFGNSGTFENSG 183

Query: 64  SLGRSNLGKLGT---SGNLGRSSFDTSGNSSDFGSSGFGNSGTLGFSKGG 108
           +LG S  G  GT   SG LG S F   GNS   G+SGFGNSG LG S  G
Sbjct: 184 TLGNSGFGNSGTFENSGTLGNSGF---GNSGTLGNSGFGNSGILGISGFG 230

BLAST of Bhi05G000760 vs. ExPASy TrEMBL
Match: A0A5D2QZ66 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G153800v1 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 54/110 (49.09%), Postives = 59/110 (53.64%), Query Frame = 0

Query: 4   GMVGRIGFGRGGNSGNLGSS---GLGKFGNSGNLETSGFGTFGNSGNFGSSCFGRFEASD 63
           G  G +G  R GNSG  G+S    LG  G SG L +SGF   G  GN G    G FE S 
Sbjct: 91  GTSGTLGNSRFGNSGTFGASDFDNLGALGISGTLTSSGFFNSGILGNSGFGNSGTFENSG 150

Query: 64  SLGRSNLGKLGT---SGNLGRSSFDTSGNSSDFGSSGFGNSGTLGFSKGG 108
           +LG S  G  GT   SG LG S F   GNS   G+SGFGNSG LG S  G
Sbjct: 151 TLGNSGFGNSGTFENSGTLGNSGF---GNSGTLGNSGFGNSGILGISGFG 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5J5RWY71.0e-0652.83Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D04G... [more]
A0A5J5RXQ05.7e-0550.91Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D04G... [more]
A0A5D2GXL05.7e-0550.94Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A04G154400v1 PE=... [more]
A0A5D2R0C31.6e-0449.09Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G153800v1 P... [more]
A0A5D2QZ661.6e-0449.09Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G153800v1 P... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000760Bhi05M000760mRNA