Bhi03G001708 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G001708
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	BHLH domain-containing protein
Location	chr3: 47069599 .. 47070427 (-)
RNA-Seq Expression	Bhi03G001708
Synteny	Bhi03G001708

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACCAGGCATTTCCATGTACTCAAATTTTGAATCTCACCTTGTTTTTCCATAATGGATTACAACTTTCCGACGAGCAACCCGAGCTCATGTGGTTCATCCTCCGGCGGCGGCGGAAAGGAGAAGATGAAAAAGAACATCAACAACGGCGGAGGGAAGAGGAGCAAGGGGGTTGTGAAGCTCTCAACGGACCCACAAAGCGTGGCGGCGAGAGAACGGCGGCATAGAATCAGCGACCGGTTCAAGATTTTGCAGAGCTTAGTTCCCGGCGGCACTAAAATGGACACCGTTTCAATGCTTGATGAAGCCATTCATTATGTCAAGTTCTTAAAAACCCAGATTTGGCTTCATCAAACTATGATTAATTTCGTTGATTATGATCCTTCTTCCGCCACCGCCGCCGCCGCCGCTAATTCCGGTCTCCCTTTTGACCAAATTGCCGGCGGCGAGTATAACAACAATATGAATTTTCTCTGCTCTCAAAACGACGTCGTTAAAATGGAGGAGCCTAATTTCTTGCCTCAGCTCGATCCCAACTATAATAATAATAATAATAATCTTTATTTCCCTTCTGATCATCAAGACCAATTCATCTCCTCTTCTTATGATCCTTACATCAACTTCTAGTTCTTTTTTCTTTTTTCTTTTTTCCTTTTTTTTAAATGGGTCTGTGATTTGTACTTAATTATGTTAATTACTATGTATTTTGGAAAAAATTAGAGTGGGGTTAAGACTGTTCATTATTATTATAATTACTATTTGTCACTACAAATTTGGAGTCTAATAGACCTTTTGTGTAAGAAAATTTCACCAGTTTCTTCTTTTTATTA

mRNA sequence

CTACCAGGCATTTCCATGTACTCAAATTTTGAATCTCACCTTGTTTTTCCATAATGGATTACAACTTTCCGACGAGCAACCCGAGCTCATGTGGTTCATCCTCCGGCGGCGGCGGAAAGGAGAAGATGAAAAAGAACATCAACAACGGCGGAGGGAAGAGGAGCAAGGGGGTTGTGAAGCTCTCAACGGACCCACAAAGCGTGGCGGCGAGAGAACGGCGGCATAGAATCAGCGACCGGTTCAAGATTTTGCAGAGCTTAGTTCCCGGCGGCACTAAAATGGACACCGTTTCAATGCTTGATGAAGCCATTCATTATGTCAAGTTCTTAAAAACCCAGATTTGGCTTCATCAAACTATGATTAATTTCGTTGATTATGATCCTTCTTCCGCCACCGCCGCCGCCGCCGCTAATTCCGGTCTCCCTTTTGACCAAATTGCCGGCGGCGAGTATAACAACAATATGAATTTTCTCTGCTCTCAAAACGACGTCGTTAAAATGGAGGAGCCTAATTTCTTGCCTCAGCTCGATCCCAACTATAATAATAATAATAATAATCTTTATTTCCCTTCTGATCATCAAGACCAATTCATCTCCTCTTCTTATGATCCTTACATCAACTTCTAGTTCTTTTTTCTTTTTTCTTTTTTCCTTTTTTTTAAATGGGTCTGTGATTTGTACTTAATTATGTTAATTACTATGTATTTTGGAAAAAATTAGAGTGGGGTTAAGACTGTTCATTATTATTATAATTACTATTTGTCACTACAAATTTGGAGTCTAATAGACCTTTTGTGTAAGAAAATTTCACCAGTTTCTTCTTTTTATTA

Coding sequence (CDS)

ATGGATTACAACTTTCCGACGAGCAACCCGAGCTCATGTGGTTCATCCTCCGGCGGCGGCGGAAAGGAGAAGATGAAAAAGAACATCAACAACGGCGGAGGGAAGAGGAGCAAGGGGGTTGTGAAGCTCTCAACGGACCCACAAAGCGTGGCGGCGAGAGAACGGCGGCATAGAATCAGCGACCGGTTCAAGATTTTGCAGAGCTTAGTTCCCGGCGGCACTAAAATGGACACCGTTTCAATGCTTGATGAAGCCATTCATTATGTCAAGTTCTTAAAAACCCAGATTTGGCTTCATCAAACTATGATTAATTTCGTTGATTATGATCCTTCTTCCGCCACCGCCGCCGCCGCCGCTAATTCCGGTCTCCCTTTTGACCAAATTGCCGGCGGCGAGTATAACAACAATATGAATTTTCTCTGCTCTCAAAACGACGTCGTTAAAATGGAGGAGCCTAATTTCTTGCCTCAGCTCGATCCCAACTATAATAATAATAATAATAATCTTTATTTCCCTTCTGATCATCAAGACCAATTCATCTCCTCTTCTTATGATCCTTACATCAACTTCTAG

Protein sequence

MDYNFPTSNPSSCGSSSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSATAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPSDHQDQFISSSYDPYINF

Homology

[Close]

BLAST of Bhi03G001708 vs. TAIR 10
Match: AT5G01310.1 (APRATAXIN-like )

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 2   DYNFPTSNPSSCGSSSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRISD 61
           D+N  + NP+S  ++S         K+   G  KRS+    LSTDPQSVAAR+RRHRISD
Sbjct: 3   DFNLRSENPNSSSTTSSSSSSFHRHKS-ETGNTKRSRSTSTLSTDPQSVAARDRRHRISD 62

Query: 62  RFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSATAAAAANS 121
           RFKILQS+VPGG KMDTVSMLDEAI YVKFLK QIW HQ M+ F++   ++++   +  +
Sbjct: 63  RFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNMLLFINDHETTSSCTYSPGA 122

Query: 122 G 123
           G
Sbjct: 123 G 122

[Close]

BLAST of Bhi03G001708 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-19
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 97
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 123 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 178

[Close]

BLAST of Bhi03G001708 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-19
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 97
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 181

[Close]

BLAST of Bhi03G001708 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-19
Identity = 48/81 (59.26%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQ 100
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAI YVKFLK QI L  
Sbjct: 123 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLN 182

Query: 101 TMINFVDYDPSSATAAAAANS 122
               +    P    + A   S
Sbjct: 183 NNTGYTPPPPQDQASQAVTTS 203

[Close]

BLAST of Bhi03G001708 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 39/56 (69.64%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 97
           VK+STDPQ+VAAR+RR RIS++ ++LQ+LVPGGTKMDT SMLDEA +Y+KFL+ Q+
Sbjct: 273 VKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 328

[Close]

BLAST of Bhi03G001708 vs. ExPASy Swiss-Prot
Match: Q9M041 (Transcription factor bHLH140 OS=Arabidopsis thaliana OX=3702 GN=BHLH140 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.8e-27
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 2   DYNFPTSNPSSCGSSSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRISD 61
           D+N  + NP+S  ++S         K+   G  KRS+    LSTDPQSVAAR+RRHRISD
Sbjct: 3   DFNLRSENPNSSSTTSSSSSSFHRHKS-ETGNTKRSRSTSTLSTDPQSVAARDRRHRISD 62

Query: 62  RFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSATAAAAANS 121
           RFKILQS+VPGG KMDTVSMLDEAI YVKFLK QIW HQ M+ F++   ++++   +  +
Sbjct: 63  RFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNMLLFINDHETTSSCTYSPGA 122

Query: 122 G 123
           G
Sbjct: 123 G 122

[Close]

BLAST of Bhi03G001708 vs. ExPASy Swiss-Prot
Match: Q7XAQ6 (Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.4e-24
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 16  SSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTK 75
           ++GG G+ +M+     GGG+R  G  KLSTDPQSVAARERRHRISDRF++L+SLVPGG+K
Sbjct: 19  TAGGLGEGRMR-----GGGRRRPG-AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSK 78

Query: 76  MDTVSMLDEAIHYVKFLKTQIWLHQTMI-----NFVDYDPSSATAAAAANSGLPFDQIAG 132
           MDTVSML++AIHYVKFLK Q+ LHQ  +          D ++A +AA A+  L  +   G
Sbjct: 79  MDTVSMLEQAIHYVKFLKAQVTLHQAALVQHEEGCQHADVAAAFSAADADLALELNHRHG 133

[Close]

BLAST of Bhi03G001708 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.9e-18
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 97
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 181

[Close]

BLAST of Bhi03G001708 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.9e-18
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 97
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 123 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 178

[Close]

BLAST of Bhi03G001708 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 48/81 (59.26%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 41  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQ 100
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAI YVKFLK QI L  
Sbjct: 123 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLN 182

Query: 101 TMINFVDYDPSSATAAAAANS 122
               +    P    + A   S
Sbjct: 183 NNTGYTPPPPQDQASQAVTTS 203

[Close]

BLAST of Bhi03G001708 vs. NCBI nr
Match: XP_038883835.1 (transcription factor LAX PANICLE 1 [Benincasa hispida])

HSP 1 Score: 381.7 bits (979), Expect = 3.6e-102
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRIS 60
           MDYNFPTSNPSSCGSSSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRIS
Sbjct: 1   MDYNFPTSNPSSCGSSSGGGGKEKMKKNINNGGGKRSKGVVKLSTDPQSVAARERRHRIS 60

Query: 61  DRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSATAAAAAN 120
           DRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSATAAAAAN
Sbjct: 61  DRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSATAAAAAN 120

Query: 121 SGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPSDHQDQFI 180
           SGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPSDHQDQFI
Sbjct: 121 SGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPSDHQDQFI 180

Query: 181 SSSYDPYINF 191
           SSSYDPYINF
Sbjct: 181 SSSYDPYINF 190

[Close]

BLAST of Bhi03G001708 vs. NCBI nr
Match: KAA0037736.1 (HLH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 4.9e-83
Identity = 170/197 (86.29%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSS-GGGGKEKMKKNINN---GGGKRSKGVVKLSTDPQSVAARERR 60
           MDYNFP SNPSSCGSSS GGGGKEKMKKN NN   G GKRSKGVVKLSTDPQSVAARERR
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGKEKMKKNNNNNHGGAGKRSKGVVKLSTDPQSVAARERR 60

Query: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSA--- 120
           HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD +S+   
Sbjct: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDSNSSAAV 120

Query: 121 TAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPS 180
           +AAA ANSG PF+QIA GEYNN  N L  QNDVVKMEEPNFLPQLDP   NNNNN+YFPS
Sbjct: 121 SAAATANSGFPFEQIASGEYNNMNNLLYPQNDVVKMEEPNFLPQLDP---NNNNNVYFPS 180

Query: 181 DHQDQFISSSYDPYINF 191
           DHQDQFISSSYDPYINF
Sbjct: 181 DHQDQFISSSYDPYINF 194

[Close]

BLAST of Bhi03G001708 vs. NCBI nr
Match: XP_031739731.1 (transcription factor bHLH140 [Cucumis sativus] >KGN54395.1 hypothetical protein Csa_018056 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 6.5e-83
Identity = 170/198 (85.86%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSS---GGGGKEKMKKNINN--GGGKRSKGVVKLSTDPQSVAARER 60
           MDYNFP SNPSSCGSSS   GGGGKEKMKKN NN  G GKRSKGVVKLSTDPQSVAARER
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGGGKEKMKKNNNNHGGAGKRSKGVVKLSTDPQSVAARER 60

Query: 61  RHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSA-- 120
           RHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD +S+  
Sbjct: 61  RHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDSNSSAA 120

Query: 121 -TAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFP 180
            +AAA ANSG PF+QIA GEYNN  N L  QNDVVKMEEPNFLPQLDP   NNNNN+YFP
Sbjct: 121 VSAAATANSGFPFEQIASGEYNNMNNLLYPQNDVVKMEEPNFLPQLDP---NNNNNVYFP 180

Query: 181 SDHQDQFISSSYDPYINF 191
           SDHQDQFISSSYDPYINF
Sbjct: 181 SDHQDQFISSSYDPYINF 195

[Close]

BLAST of Bhi03G001708 vs. NCBI nr
Match: TYK10925.1 (HLH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 168/197 (85.28%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSS-GGGGKEKMKKNINN---GGGKRSKGVVKLSTDPQSVAARERR 60
           MDYNFP SNPSSCGSSS GGGGKEKMKKN NN   G GKRSKGVVKLSTDPQSVAARERR
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGKEKMKKNNNNNHGGAGKRSKGVVKLSTDPQSVAARERR 60

Query: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSA--- 120
           HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD +S+   
Sbjct: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDSNSSAAV 120

Query: 121 TAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPS 180
           +AAA ANSG PF+QIA GEYNN  N L  QNDVVKMEEPNFLPQLDP   NNNNN+YFPS
Sbjct: 121 SAAATANSGFPFEQIASGEYNNMNNLLYPQNDVVKMEEPNFLPQLDP---NNNNNVYFPS 180

Query: 181 DHQDQFISSSYDPYINF 191
           DHQDQFISSSYDPY  F
Sbjct: 181 DHQDQFISSSYDPYXFF 194

[Close]

BLAST of Bhi03G001708 vs. NCBI nr
Match: XP_022931869.1 (transcription factor bHLH140 [Cucurbita moschata])

HSP 1 Score: 271.6 bits (693), Expect = 5.3e-69
Identity = 155/201 (77.11%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSSGGG-----GKEKMKKNINNG-GGKRSKGVVKLSTDPQSVAARE 60
           MDY FP SNPSSCGSSSGG       KEK+KKN +   GGKRSKGVVKLSTDPQSVAARE
Sbjct: 1   MDYTFPASNPSSCGSSSGGATTGATRKEKLKKNSSGSCGGKRSKGVVKLSTDPQSVAARE 60

Query: 61  RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPS--S 120
           RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD S  S
Sbjct: 61  RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDDSSNS 120

Query: 121 ATAAAAANSGLPFDQIAGGEYNNN--MNFLCSQNDVVKMEE-PNFLPQLDPNYNNNNNNL 180
             AAAA N G  FDQIAGGE++NN   +F+ SQNDVVKMEE PN LPQLDP      NNL
Sbjct: 121 TAAAAAVNCGFHFDQIAGGEFHNNDTNSFVYSQNDVVKMEEPPNLLPQLDP------NNL 180

Query: 181 YFPSDHQDQFISSSYDPYINF 191
           YFPS  QDQ++ SSYDPY+NF
Sbjct: 181 YFPSG-QDQYMCSSYDPYMNF 194

[Close]

BLAST of Bhi03G001708 vs. ExPASy TrEMBL
Match: A0A5A7T6E1 (HLH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00320 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.4e-83
Identity = 170/197 (86.29%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSS-GGGGKEKMKKNINN---GGGKRSKGVVKLSTDPQSVAARERR 60
           MDYNFP SNPSSCGSSS GGGGKEKMKKN NN   G GKRSKGVVKLSTDPQSVAARERR
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGKEKMKKNNNNNHGGAGKRSKGVVKLSTDPQSVAARERR 60

Query: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSA--- 120
           HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD +S+   
Sbjct: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDSNSSAAV 120

Query: 121 TAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPS 180
           +AAA ANSG PF+QIA GEYNN  N L  QNDVVKMEEPNFLPQLDP   NNNNN+YFPS
Sbjct: 121 SAAATANSGFPFEQIASGEYNNMNNLLYPQNDVVKMEEPNFLPQLDP---NNNNNVYFPS 180

Query: 181 DHQDQFISSSYDPYINF 191
           DHQDQFISSSYDPYINF
Sbjct: 181 DHQDQFISSSYDPYINF 194

[Close]

BLAST of Bhi03G001708 vs. ExPASy TrEMBL
Match: A0A0A0KXM0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G312280 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.1e-83
Identity = 170/198 (85.86%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSS---GGGGKEKMKKNINN--GGGKRSKGVVKLSTDPQSVAARER 60
           MDYNFP SNPSSCGSSS   GGGGKEKMKKN NN  G GKRSKGVVKLSTDPQSVAARER
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGGGKEKMKKNNNNHGGAGKRSKGVVKLSTDPQSVAARER 60

Query: 61  RHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSA-- 120
           RHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD +S+  
Sbjct: 61  RHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDSNSSAA 120

Query: 121 -TAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFP 180
            +AAA ANSG PF+QIA GEYNN  N L  QNDVVKMEEPNFLPQLDP   NNNNN+YFP
Sbjct: 121 VSAAATANSGFPFEQIASGEYNNMNNLLYPQNDVVKMEEPNFLPQLDP---NNNNNVYFP 180

Query: 181 SDHQDQFISSSYDPYINF 191
           SDHQDQFISSSYDPYINF
Sbjct: 181 SDHQDQFISSSYDPYINF 195

[Close]

BLAST of Bhi03G001708 vs. ExPASy TrEMBL
Match: A0A5D3CHB0 (HLH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00040 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.0e-81
Identity = 168/197 (85.28%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSS-GGGGKEKMKKNINN---GGGKRSKGVVKLSTDPQSVAARERR 60
           MDYNFP SNPSSCGSSS GGGGKEKMKKN NN   G GKRSKGVVKLSTDPQSVAARERR
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGKEKMKKNNNNNHGGAGKRSKGVVKLSTDPQSVAARERR 60

Query: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSSA--- 120
           HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD +S+   
Sbjct: 61  HRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDSNSSAAV 120

Query: 121 TAAAAANSGLPFDQIAGGEYNNNMNFLCSQNDVVKMEEPNFLPQLDPNYNNNNNNLYFPS 180
           +AAA ANSG PF+QIA GEYNN  N L  QNDVVKMEEPNFLPQLDP   NNNNN+YFPS
Sbjct: 121 SAAATANSGFPFEQIASGEYNNMNNLLYPQNDVVKMEEPNFLPQLDP---NNNNNVYFPS 180

Query: 181 DHQDQFISSSYDPYINF 191
           DHQDQFISSSYDPY  F
Sbjct: 181 DHQDQFISSSYDPYXFF 194

[Close]

BLAST of Bhi03G001708 vs. ExPASy TrEMBL
Match: A0A6J1EVF6 (transcription factor bHLH140 OS=Cucurbita moschata OX=3662 GN=LOC111438152 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 155/201 (77.11%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSSGGG-----GKEKMKKNINNG-GGKRSKGVVKLSTDPQSVAARE 60
           MDY FP SNPSSCGSSSGG       KEK+KKN +   GGKRSKGVVKLSTDPQSVAARE
Sbjct: 1   MDYTFPASNPSSCGSSSGGATTGATRKEKLKKNSSGSCGGKRSKGVVKLSTDPQSVAARE 60

Query: 61  RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPS--S 120
           RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD S  S
Sbjct: 61  RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDDSSNS 120

Query: 121 ATAAAAANSGLPFDQIAGGEYNNN--MNFLCSQNDVVKMEE-PNFLPQLDPNYNNNNNNL 180
             AAAA N G  FDQIAGGE++NN   +F+ SQNDVVKMEE PN LPQLDP      NNL
Sbjct: 121 TAAAAAVNCGFHFDQIAGGEFHNNDTNSFVYSQNDVVKMEEPPNLLPQLDP------NNL 180

Query: 181 YFPSDHQDQFISSSYDPYINF 191
           YFPS  QDQ++ SSYDPY+NF
Sbjct: 181 YFPSG-QDQYMCSSYDPYMNF 194

[Close]

BLAST of Bhi03G001708 vs. ExPASy TrEMBL
Match: A0A6J1HPK4 (transcription factor LAX PANICLE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111466180 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.8e-68
Identity = 154/203 (75.86%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 1   MDYNFPTSNPSSCGSSSGGG-----GKEKMKKNINNG-GGKRSKGVVKLSTDPQSVAARE 60
           MDYNFP SNPSSCGSSSGG       KEK+KKN +   GGKRSKGVVKLSTDPQSVAARE
Sbjct: 1   MDYNFPASNPSSCGSSSGGATTEATRKEKLKKNSSGSCGGKRSKGVVKLSTDPQSVAARE 60

Query: 61  RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDPSS-- 120
           RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD SS  
Sbjct: 61  RRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDDSSNS 120

Query: 121 --ATAAAAANSGLPFDQIAGGEYNNN--MNFLCSQNDVVKMEE-PNFLPQLDPNYNNNNN 180
             A  AAA N G  F+QIAGGE++NN   +F+ SQNDVVKMEE PN LPQLDP      N
Sbjct: 121 TAAVTAAAVNCGFHFNQIAGGEFHNNDTNSFVYSQNDVVKMEEPPNLLPQLDP------N 180

Query: 181 NLYFPSDHQDQFISSSYDPYINF 191
           NLYFPS  QDQ++ SSYD Y+NF
Sbjct: 181 NLYFPSG-QDQYMCSSYDAYMNF 196

The following BLAST results are available for this feature:

BLAST of Bhi03G001708 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01310.1	4.8e-28	54.55	APRATAXIN-like	[more]
AT3G50330.1	7.0e-19	78.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	7.0e-19	78.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	9.2e-19	59.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	1.3e-17	69.64	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Bhi03G001708 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M041	6.8e-27	54.55	Transcription factor bHLH140 OS=Arabidopsis thaliana OX=3702 GN=BHLH140 PE=3 SV=...	[more]
Q7XAQ6	5.4e-24	55.37	Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=L...	[more]
Q9FHA7	9.9e-18	78.57	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	9.9e-18	78.57	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	1.3e-17	59.26	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]

BLAST of Bhi03G001708 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883835.1	3.6e-102	100.00	transcription factor LAX PANICLE 1 [Benincasa hispida]	[more]
KAA0037736.1	4.9e-83	86.29	HLH domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_031739731.1	6.5e-83	85.86	transcription factor bHLH140 [Cucumis sativus] >KGN54395.1 hypothetical protein ...	[more]
TYK10925.1	2.1e-81	85.28	HLH domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_022931869.1	5.3e-69	77.11	transcription factor bHLH140 [Cucurbita moschata]	[more]

BLAST of Bhi03G001708 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6E1	2.4e-83	86.29	HLH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A0A0KXM0	3.1e-83	85.86	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G312280 PE=4 S...	[more]
A0A5D3CHB0	1.0e-81	85.28	HLH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1EVF6	2.6e-69	77.11	transcription factor bHLH140 OS=Cucurbita moschata OX=3662 GN=LOC111438152 PE=4 ...	[more]
A0A6J1HPK4	2.8e-68	75.86	transcription factor LAX PANICLE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111466...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 49..98 e-value: 1.6E-12 score: 57.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 53..92 e-value: 1.4E-7 score: 31.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 43..92 score: 15.357671
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 46..104 e-value: 3.1E-10 score: 42.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 48..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 26..153
None	No IPR available	PANTHER	PTHR45914:SF2	TRANSCRIPTION FACTOR LAX PANICLE 1	coord: 26..153
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 44..103 e-value: 1.53228E-41 score: 132.516

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001708	Bhi03M001708	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity