Bhi03G001558 (gene) Wax gourd (B227) v1

Overview
NameBhi03G001558
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 42831997 .. 42832300 (+)
RNA-Seq ExpressionBhi03G001558
SyntenyBhi03G001558
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGATTGGAACAACCCCTCACAATTTGCTGCAAATCGTTCTCAAATTATCAAAACTCTCAGAGAAGTTGTTAAAGTAAGCCCCCAAAGGAAACAAAAGGTTTAAACTATCTATATATACAATTTTGTTTTTGTACTTCATTAACTTTGATTTTCCTTCATGTGATTTGCAGAGGGTTGTATACGAGTTTAAATTATCGTTGTCGCCATTAAACCCATGCGAAAGAACCAACGTCGATGGCGTCGTTGAGGCAGTTCCTGTCTCCTTTCGGCCTCCGTCCACCAGCATGGATATGGTATGA

mRNA sequence

ATGCTTGATTGGAACAACCCCTCACAATTTGCTGCAAATCGTTCTCAAATTATCAAAACTCTCAGAGAAGTTGTTAAAAGGGTTGTATACGAGTTTAAATTATCGTTGTCGCCATTAAACCCATGCGAAAGAACCAACGTCGATGGCGTCGTTGAGGCAGTTCCTGTCTCCTTTCGGCCTCCGTCCACCAGCATGGATATGGTATGA

Coding sequence (CDS)

ATGCTTGATTGGAACAACCCCTCACAATTTGCTGCAAATCGTTCTCAAATTATCAAAACTCTCAGAGAAGTTGTTAAAAGGGTTGTATACGAGTTTAAATTATCGTTGTCGCCATTAAACCCATGCGAAAGAACCAACGTCGATGGCGTCGTTGAGGCAGTTCCTGTCTCCTTTCGGCCTCCGTCCACCAGCATGGATATGGTATGA

Protein sequence

MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRPPSTSMDMV
Homology
[Close]
BLAST of Bhi03G001558 vs. NCBI nr
Match: KAA0032655.1 (hypothetical protein E6C27_scaffold184G00400 [Cucumis melo var. makuwa] >TYK23535.1 hypothetical protein E5676_scaffold500G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 6.4e-17
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 0 

Query: 1  MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
          MLDWN+PS+   NRS II+TLREVVKRVV EF+L  SPLN   R N DGVVEAVPVSFRP
Sbjct: 1  MLDWNDPSKIDENRSLIIRTLREVVKRVVVEFRLLSSPLNASGRANQDGVVEAVPVSFRP 60

Query: 61 PSTSMDM 68
          PSTS  M
Sbjct: 61 PSTSQKM 67

[Close]
BLAST of Bhi03G001558 vs. NCBI nr
Match: XP_022950721.1 (uncharacterized protein LOC111453734 [Cucurbita moschata])

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           MLDW++P++ AANRSQIIKTLRE+VKR V EF+LS SP+N  ER N D VVEAVPVSFRP
Sbjct: 100 MLDWSHPTKTAANRSQIIKTLREMVKRAVTEFRLSSSPMNLNERANFDDVVEAVPVSFRP 159

Query: 61  PS-TSMDMV 69
           P   + DMV
Sbjct: 160 PQPPNTDMV 168

[Close]
BLAST of Bhi03G001558 vs. NCBI nr
Match: KAG6603652.1 (hypothetical protein SDJN03_04261, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 3.5e-15
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           MLDW++P++ AANRSQIIKTLRE+VKR V +F+LS SP+N  ER N D VVEAVPVSFRP
Sbjct: 100 MLDWSHPTKTAANRSQIIKTLREMVKRAVTKFRLSSSPMNLHERANFDDVVEAVPVSFRP 159

Query: 61  PS-TSMDMV 69
           P   + DMV
Sbjct: 160 PQPPNTDMV 168

[Close]
BLAST of Bhi03G001558 vs. NCBI nr
Match: XP_023544595.1 (uncharacterized protein LOC111804126 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 6.0e-15
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           MLDW++P++ A NRSQIIKTLRE+VKR V EF+LS SP+N  ER N D VVEAVPVSFRP
Sbjct: 100 MLDWSHPTKTAPNRSQIIKTLREMVKRAVTEFRLSSSPMNLNERANFDDVVEAVPVSFRP 159

Query: 61  PS-TSMDMV 69
           P     DMV
Sbjct: 160 PQPPDTDMV 168

[Close]
BLAST of Bhi03G001558 vs. NCBI nr
Match: XP_022979131.1 (uncharacterized protein LOC111478862 [Cucurbita maxima])

HSP 1 Score: 90.5 bits (223), Expect = 6.0e-15
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           MLDW++P++ AANRSQIIKTLRE+VKR V EF+L  SP+N  ER N D VVEAVPVSFRP
Sbjct: 100 MLDWSHPTKTAANRSQIIKTLREMVKRAVTEFRLLSSPMNLNERANFDDVVEAVPVSFRP 159

Query: 61  PS-TSMDMV 69
           P   + DMV
Sbjct: 160 PQPPNTDMV 168

[Close]
BLAST of Bhi03G001558 vs. ExPASy TrEMBL
Match: A0A5A7STU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00390 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 0 

Query: 1  MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
          MLDWN+PS+   NRS II+TLREVVKRVV EF+L  SPLN   R N DGVVEAVPVSFRP
Sbjct: 1  MLDWNDPSKIDENRSLIIRTLREVVKRVVVEFRLLSSPLNASGRANQDGVVEAVPVSFRP 60

Query: 61 PSTSMDM 68
          PSTS  M
Sbjct: 61 PSTSQKM 67

[Close]
BLAST of Bhi03G001558 vs. ExPASy TrEMBL
Match: A0A6J1GFL7 (uncharacterized protein LOC111453734 OS=Cucurbita moschata OX=3662 GN=LOC111453734 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-16
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           MLDW++P++ AANRSQIIKTLRE+VKR V EF+LS SP+N  ER N D VVEAVPVSFRP
Sbjct: 100 MLDWSHPTKTAANRSQIIKTLREMVKRAVTEFRLSSSPMNLNERANFDDVVEAVPVSFRP 159

Query: 61  PS-TSMDMV 69
           P   + DMV
Sbjct: 160 PQPPNTDMV 168

[Close]
BLAST of Bhi03G001558 vs. ExPASy TrEMBL
Match: A0A6J1IPX0 (uncharacterized protein LOC111478862 OS=Cucurbita maxima OX=3661 GN=LOC111478862 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-15
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           MLDW++P++ AANRSQIIKTLRE+VKR V EF+L  SP+N  ER N D VVEAVPVSFRP
Sbjct: 100 MLDWSHPTKTAANRSQIIKTLREMVKRAVTEFRLLSSPMNLNERANFDDVVEAVPVSFRP 159

Query: 61  PS-TSMDMV 69
           P   + DMV
Sbjct: 160 PQPPNTDMV 168

[Close]
BLAST of Bhi03G001558 vs. ExPASy TrEMBL
Match: A0A0A0KZK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296080 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.5e-14
Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1  MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCE-RTNVDGVVEAVPVSFR 60
          MLDW++ S+   NRS II+TLREVVKRVV EF++  SPLN    R N DGVV+A+PVSFR
Sbjct: 1  MLDWSDSSKIDENRSLIIRTLREVVKRVVVEFRMLSSPLNDTSGRANQDGVVDAIPVSFR 60

Query: 61 PPSTSMDMV 69
          PPS++++MV
Sbjct: 61 PPSSNLNMV 69

[Close]
BLAST of Bhi03G001558 vs. ExPASy TrEMBL
Match: A0A6J1CS37 (uncharacterized protein LOC111013677 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013677 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.8e-12
Identity = 44/69 (63.77%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 1   MLDWNNPSQFAANRSQIIKTLREVVKRVVYEFKLSLSPLNPCERTNVDGVVEAVPVSFRP 60
           M+ WNN       RSQI KTLREV+KR V EF+LS S LN  ER N++ VVEAVPVSFRP
Sbjct: 114 MIGWNNSE--TTQRSQISKTLREVIKRAVMEFRLSSSALNVDERENLNDVVEAVPVSFRP 173

Query: 61  P-STSMDMV 69
           P S +MDMV
Sbjct: 174 PESVNMDMV 180

The following BLAST results are available for this feature:
BLAST of Bhi03G001558 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G001558 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G001558 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032655.16.4e-1773.13hypothetical protein E6C27_scaffold184G00400 [Cucumis melo var. makuwa] >TYK2353... [more]
XP_022950721.11.2e-1569.57uncharacterized protein LOC111453734 [Cucurbita moschata][more]
KAG6603652.13.5e-1568.12hypothetical protein SDJN03_04261, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023544595.16.0e-1568.12uncharacterized protein LOC111804126 [Cucurbita pepo subsp. pepo][more]
XP_022979131.16.0e-1568.12uncharacterized protein LOC111478862 [Cucurbita maxima][more]
BLAST of Bhi03G001558 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7STU23.1e-1773.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1GFL75.9e-1669.57uncharacterized protein LOC111453734 OS=Cucurbita moschata OX=3662 GN=LOC1114537... [more]
A0A6J1IPX02.9e-1568.12uncharacterized protein LOC111478862 OS=Cucurbita maxima OX=3661 GN=LOC111478862... [more]
A0A0A0KZK55.5e-1462.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296080 PE=4 SV=1[more]
A0A6J1CS378.8e-1263.77uncharacterized protein LOC111013677 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001558Bhi03M001558mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding