Bhi02G001288 (gene) Wax gourd (B227) v1

Overview
NameBhi02G001288
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRNA-binding family protein
Locationchr2: 41099638 .. 41109271 (+)
RNA-Seq ExpressionBhi02G001288
SyntenyBhi02G001288
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGCGCTGATGTAGAGGCTGTCGATTTCGAGCCCGAGGAAGATGACCTCATGGACGAGGATGGTGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCGCTTGCTGGTGGTCCAAAGAAGACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGATTTCGATTCCCTCAAGTCTGCTGATGGCCCTGGACCTCAACGATGTTAGTTTTTGCCCTTCTCTCTTTCTCAATTACTTACTTTGACAGATTGGGTTTTACCATTTCGTTTTGCTGGTTTTTTCTTTAGTTCGTTAGAGCTAGGGTTATGAAAGTTTGGATGGTTATTTACTTGGTAGGTGGTGGGTTTAGGTTTATTGGCCTGTGTGTTCTATGAAAGGTGAGTCTTCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCAATTTCGGGACTAATGAGTTAAGAGTAAGCAGATCTTTTCCTTCTGCTTGAAGGGGTTTTGCTTACTGTTAATGTCGGTTGATTTGCCCTCTTTGTTTCAACAATGCTACAGATCTTAGCTAGAATTTGAGGTGGGAAATCATTGTAGAGGAAAAGGATGCAAGTGTTGTTGTGGGAAATTATCATGGAATACCTACACTCAAGAGAAAGTTCATAGAATGAGCCTCTCATTGCCTTATATCCCCAAGACGGTGCACTCTTTGGAAGCGGCTGAGGAGTTTTAGGATCACTTTTACATTCATTTGCCACCTCGCCTCCTCCTTTTGTAATTTCCTCCTTTTCTTCTGCTGGGTGGACTGGATCAACCATTAGCACAGGGATATACAGTGATCTCTCCATTCTATCATGAGTAACCACCCATTCAGAAAAGAAAAAAAAAACTGAGGGTTTAGTTTAACCTGATTGAAAGTTGGTTTGTTGACTAGAATAAAGCTATTTCTTCATTCTCTCATGATATGCTCTCACTTCCTATTTGGTTGCATTTGCGATGGCCAACACCATTGACTTTTCCTGGAAATCCTCGTCGATAGTTTTGGATCTTTACTGCTGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAGTGAGCATCAAAAGGATTATATCACCATTTATGAAGGTGTCTCTTTTCAGTGGAGATTTGGGATAGATTTTGGAACAGACTTTATTGAGCGTGGCTCCAGATAGAGGATCATTTTTTTATGCATAGCCCTTGATTTGAATCTTCATTTACCTTAATGAAAGTTGGTTTTTCATTAAAAATAAACTGTATAAGCTTTTCTTCTGGATAATTTAGAATGAAAGTAAATGGTGTACATTTTTGGAAAAGGGACGGGAGCAATTGGTTTCTCTTTCTTGTATATTTTGTTTTATTGGTTTCTTCCTTCTCCCGTCCCTAGTCTGTATCTTTTTCCTTTTATGTCGAATACAATTCAGGCTTCTTATAAAAAATTATATATAAAAAATATTGGTATTTCTTGGTTTATCTAATGAGAGGAAGGCCATGGGTGTAGATGGAGAAAATGTGTGTTCGTTCTCTCTTCTCAAATTTTATAGTTTTATTTAATGGAAGATGTAGAAAGAAAATATTTGCTTGCAGAGTTTGCACCAATGTCATCCCTTTCTTCTAACAAATTTGGCTGATTTCTTGCCTTATGAATGAGGTCCACACCCGTATTATCAAAGCTGTTAAAATTTTATAGAGGTGAGGCCCATGTTTTCTTTTGAAAAAGAAATGAAACCGTTCATCGATAAAATGAAAAGAGGCTAATGCTCCAAAATACAAGGTATCTACAAAAGAAAGACAAATAGAAAAGACAACCGCAACTGATGAAGAGTAATATCAGCCAAATAAGATGAAAAGCCTACAACTAAGAAGCACAAAAGCTTTTAAAGAGGGCACCTAGAAGAAGCTAAGAGATGAACCGAACCAAAACAAAATGAGCAACATAGTGAAACAAGTAATAACAAACCGTTGGTTTTTGCCCTAATGATGCCAATGTTCTTAATAGTTGGTGAGAAATTTTGTAGTTTATGACTGGTTATGGGTTTTTGTTGAATCTTTCTAAGACTTCGTTTATTGGTATTGATATGGATAAGGAGGAAGTTGATAAATGGGTCATTTTTGAAGTGTCAAGCTGAGACCTTAATGATTAATTATCTTGGCTTCCCTTGGATAGAGATCATCACAATATATCTATTTGGGCGCTGCTTATTGAGAAATTAAGAGTTGAGATTGACAATTGGTGATGCCACCTCTCTAAAGGTCGTAGGGTGACCCTCATCCAATCTGTTCTTGATAGTTTTCCTCTATATCACTTTTCTCCTCTAAGAGCTCTAAAGAACATCATGACTTCTATGGAAAAGATTATCAGAGACTTTGTGTGGATTGATCTTTCCAAGCCCGATAGTAACTTAGTCAGAAGGGAGTGGACAACTTTTCCAATTCCCCTTGGGGGTTTTGGTGTGGGCTCCCTTAAACATCGAAATATCTCTCTCCTCACCAAGTAGATTTGGAGATTTACTCAAGAAAAGTTCTTTGTGAAACAGGGTTATTTCTAGAATTTATGGTGTCAAACCTCAGGGTTGGATGGCTGACAACCTCAAAAAGAAAAAAGATAACAATCGTGGGTGGATGGATATTGCAAGGAATTACTCCTTATTTGCTTGTTTTGCGAAATTCGAGGCTGGTTGTGGTAGGAAAATTTGCTTTTGCCATGCTGTTTGGGTTGTCCGAGCTCCTTTGAAATACTACTTTCTTGATATTTACGCTCTCTCTTTTAGAAAAGGGACCATTGTCTTTGATTGTTAGGACAACCATAACCATGCGTGTGACCTTGGCTTTAGAAGAGGGCTCTTTGATTGTGAGATGGATAGTTGGGTTGGCCTGGTGGGAAAGCTCAACTCCATTCAATTGGGGATGGTGTGGATTGAGGTCTTTGGTCCCTTCAAGGTTATGGTATGTACTCTAGTAATTCGACCTTTCAAAATCTTGCTACTAAGCCTACTAAGGCTAACACAACTCTGACTAGTAGAATTTGAAAGCATAAATGGCCAAAAAAATCGAAGTCCATCTGGTCCTTGGCTTTGAAGTTTTAGTATTGATAATAAGCTCCAAAGAAAGTTTAGAAGTTGGTCTCTCGCCTTCACGTTGTAGGTTGTGTTTGAATAGGGAGGAAAGCCTTGATCACCTCTTTCTCCATTGTAACTTTGCTTTGAGATCTTGGAGTTACTTGGTTGGTAATTTAGGCTCGTCTTTTTTTCTCCCTAAGAAAGTGGATGGGGGTGTATGGAAGGTATCCACGCTTGGAACTTGGAAGGAAAGGCCATGATTGTCAGAAGTTTTGCCTTTAAAGCTCTTTTGTGGCACATTTGGAAGGAAAGACATCTTTGTTCTTAGTTCTTTCGAAGAAAAGTCACAAGTCTTCTTGCTTTAGCCTCTCTCTCTGGTAATCTTGGACATATACAACTTCCTGGTGGATCGCTTTACCTACGAAAATTCTTTTGTAACTGCAGGAAACTCGTATGGTGTAGTTCTCTTCTTCAGGGTGTGTCCTTTATCCTTGGCCCTTAGGTTGTTCTTGTTCTATTTTGGAATATATTCCTTTTGTTTCCTATAAAAAACCCATTTACGTTAGGGCTATTGCATGATGGAGAACTCCTTTTCAAGACAAGGGAAATGTTCTTTGGAAAGCTTGCTACTTCGCTGTTTCATGGGGTGTTTGGTTAGGAACTTAGGGAGGAATAGTAGAATTTTTAGAGGAGTTAGAGATGTCCTGAGAAGAGATTTATGATAGCATTAGATTCATCTCTTCGTTGTGGGCTTTAGTATCTCTAGATTTTTGTAATTATCAACTTGGTTGGTTTCTTTTGGAGTAGTGTCCCTTTCTTTAATTGGACTATTCTTCCTCGAGTGCTTTTTGTGTCCTTGAATATTGGATATTTTGTTTTTTCATTTCACTCTTTGTCTGTGATGGGGGTTCTTTGGTCAATGCTTGAATTCAGTCTTGTCTGGCACTCATGGAAATAAGAAGCAATAGTCCTTTTTTTTGTGATACTCTGAAATTTTGGATGACTTCTTTGTTTTGGTCCATTTTGTTACTTTCCTCTGGAGCTCTTCAAACAGAACTTAAAAACCATTCTCCTTCTCTTAGAGATTTAAACTGGGTAGCTCTTTGTAGTTCCATGGCTTGGGCTTGGACTTGGAGATAGATAACTAATCCCCTCCCTGTTTTTTGCACTTTTCCTGGTTATTTATATGAAGTTTTTGCCTACCAAATGATAAAAGTGGTCCAGGACTTCAGTCATTTCAAGGAAAAAAAATTAAAACATTTTATCCTATTGAATTTGTGATTTGAGAAATGATCCTATGTAGGAATCTGTGTCCAACCCTTCATTAATTTAGAAAGCTTCTTGATGGTGGATTTACATATGATGCTAAACACAATACGATCTCACAAGTCATGACTATTATTCATTTCTTACACAACAAAATAGATCAAGACTATCCTAAACCTGATTTAATATCTGAAAATTATAGTTGCTTAATCTTTTTTTTTTTTTGAGTTCAACAAATATGGGGTCGGAATTCAAGCCTCCCACCTCAAGGAAAAGAAGTGGTGCCTTAACCAATGAGCTACACTCATGTTGGTTGGTAGTTGCATGATTTATGCACTTGCTCCTACAAAAAGTTGCTTCTACTTCTGCAGTTCAACTTTTTTCTCTTAAAAAAGTTTATCAACTGCATTCAGATGGGCAGACTGAACTAGTAGGCTGATTGGTCAATCTAGTTCAACTTACCCCTGATCAAGGCCTACAGATTGTTACCTGCCATACGTGATATTTCAGATGAGCAGCTACACCTTGGTTGATTGTGTCTGACCCCATTCTTTGGCTTCCGAGCATGTCCTTGTTACACTGTTGTGAACAACAAATGTTTGATCACGTGATTTAAAAAATAAGCTGTTTTCTTTTGACTCCTTTTGTAGTAACACACTATGCACAACCTTTTGGCGGTGCATAAAAACAAGGAATTCTTTTGTAATTTTAGCTTGTCATTGATCCAATTGAACTTGAAAGCTCTCCTATAGCCTTTTTGTTTTGTTTTCTGAAAGAGGGGGGAGGGGGGGTGGGTTCTGTCTTCCCCTCTCCTTTAGGATGTCCTTTTTTGGGTTTTTTTTTTTGAATAATACACATTAATACTCCTTAGATTATTGTCTGATTCTAGTTAATTTATGTAGCTATTGAAGGATGGATCATTCTGGTGACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGACTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGGGTTCGTGAAGGTATGTTTGGTTCCTATATTATTTAATTATCCCCCCTAAAGAAACAATAGTTTTGTAGTTTTCTTTTGCTACCTATTAAAGAAAAGAACATGCATATATTTTTATTGTTTAATAGTTTAAAAAAGTAGAAATAACGAAGAAATTTAGGGACGACCTTACTTGAACGAGATTTGTTCTATAGGTTATACAGCTTTGCCTTTTAATTTTGAAAATAACCAAAAAATTTTGGGAGGAACCAAATAGAAATTTCAAATTTTGCTAATGATCGGATAGTTTGTAAGAAGAATGGAGTAGTATTGTAGAACTTGTTTTTATATTTGAAATCAATTTTTATTCTTTTTTTATTGATTTTTCTCCCTTTTCTTTGCAACACTAGTTCCCTCACCCTTCTTGAAAGCACAATAAATTGTTTTAACATTAAATGAGGTGTGCGAAACAGTTCCTCACCCTATCTGGTGTACCTTTCCCCACCCTTTAGTATTTATAACTTTTTGCAAGTCTTCTTCCCATTGGGGCAATTCTTTTTAAGCTCCAATTGATCTTGTTTGTCTCATCTTTCTTGATTAACTTTAAGGGCATTCCTTATGACAATTAATTAACTAGAAGTGTTGAAAAGGCCAAACTGAGTGTAGAGCTGAAGTGGTGACATATTTATCTTGTCTATTATGGTTTGCACGTTTGAAGTCAAATCCCTACCTTCTTCTTTGCTCTCTATATATATATACACTTTTAGAGGAGTACAAAAGGGTTGGAGGCTAAGATGGCGTTCTCTAAAGAAGATTTTGTAGAACAGTAAACCAGTTGCAATGCAAATAATAAATTAGATAGGGGGTACCAAAGACTTGGAGACTAAAATGTCGACCAAAGATTATCAGGACACTAAACAAGCTACGATGCAATGAATAACAATGGTGTTGCCAATTAGCCAGCACAAGAAGAAAACACCTTACTGAAATAATGGGATTCTGCAAACTTACCCATTTACCCTAGAAGATCTTTTAGGACATCATTGATGAAAGCATGAAAATGCACCATACAAAGAGTTAGGATCATTATGAGTAAGCATGGCAACCATCCTTTTGATTGGGGGGAGAAAGGGGTTAAAGGCACACACTGGAATCCGTGGAAAGATATTTCGTCTGAGCATCCTACTTTTTCTCATTTTGTTCATTGTGTCGTGGGGGATGAGAAAGACACGTATTTTTGGGAGGATCAGTGGGTGGGGGATAATGCTCTTTCTTTTGTCTATTTGCATCTCTATCATTTGTCTTCTTTTAAAAACCACTCGGTCTTGGTTGGTCCGAGTACTCTGTCTTTTTCTTTTGGGTTCCATCATCGTCAATAGAGAAACAATGGAGGTTACCTCTCTTCTTTCTTCCTTCTTTATTGGAAGATTGCAATTTTAGGGTGGGGAGAAGGGATGTTCGCATTTGGAGTCCAAATCCTAGTGAAGGATTTTCTTGTAAATCCTTTTCTCGGTTGGTCCGAGAACTCTGTCTTTTTCTTTTGGGTTCCGTTGTCGTCAATAGGGAAACAATGGAGGTTACCTCTATTCTTTCTTCTTTCTTTATTGGAGGATTGCAATTTTAGGGTGGGGAGAGGGATGTTTGCATTTGGAGTCCAAATCCCAGTGAAGGATTTTCTGGTAAATTCTTTTCAGATTGTTGTTGGATCCCTCTCCCATTAGGGAGTCTGTGTTTGATGTGGTTTGGAGGACTAAGATTCCTAAGAAAGTCAGTTTTTTTATTTGGCAAGTCTTCCTTGGTCAGATGAACACTTTAGATAGGCTTGTAAGGAGGATGTGTGTGTGTGTGTGTAGTGCTTCCTAGATGATCTCTTCCGCCAATTTTTTTTCCAAGGAAGTAGAGATCATTTCATTGATATGGTGAAATGTGTAAATAGAAGAATCCTGTCTGTACATAATTATAAGTCATTTTGGATGGTCTTTGGTGCTTCCTAAAGATGTTACAACTCCCCTTATCTCCATCCTCTTGGGTCACCCTTTCAAGAATGCCAAAGCTTTTTTGGGGCTGCATACATCTCGTGCTTTCTTTTGGTTATTATGGAAGAAAAGAAACCAAAAATTGTTCATGGACAATAATCATCCTCTCAATAGCTTCTTTGATGTTGTCATTTATTATGCTATCTCTTGCTGTAAAAGCTCTAATATTTTTTCTTCATATTCATACACTTCCCGACTAAACCACTGTGATACTGATAGCTTATTGTAATACCATGGAATGTATATCCTTTTTTTGTGAATTTCATACATCAATGAAATTGTTCCTTACGGGGAAAAAAAAGAAAGAACAGTGAGGGCAGATGAACTATAATTACAAAAAGGAGGGGAGACAATCTACTCCTAGATAAAGCTAATAAAGCTGTGGATTCAACGAACTTGGTGAAATCTTGATGCTTATCTTAAAACAATGCATGCATTCCATTCCATCCACTAGTTCCAAAAGAAAGTCTGAACAAAATTCAGCCCAAGTGTCTTTTTCTCCCTTTTGAAGGGATGACCCATAAGGAAAAGGGAGAAAAAAGAGTAGATATCCTTTCATCTATCTAAATGAAAGTTTGGTTGAAGAACCCAACGAATGAAGTTCCAGAAGGATGTTGCAAAGATGCAATTACTGAAAAAGTGGATCTGAGTTTCATAGTCCCTTGAACAGAAGGGGCACCTGGGAGAGATGAAGAGCGATGGCCAACGGGGATCTTTTTTGAGTTTTGTCTTTATATGAGTAGCTAAGATTTATCCACCATTTTTCTCTAAAAGAGGACAAACAGATTATGACATTCAAAGGGGTCTAACTGACAAAACCTAACTATTGGACAACGTGACACATGTTTCTTTCCTAAAGGGGATGGATATGGATCAAATAAAAGCCCTCCAATCATAGTGTAGTTGTAAAAGAACTTGGCACCCCAATTTTTTGATGCCTTGGACAGTTGAACGGCACATCATTACAAAAATAATTCTAAAAGTTTGACTTATCTGCAAAAATCCTAGTATTTCTGTCCTTCCATGGGAGCCAAAAAGAGCCCCAGATGCGTTAGACTAGAGGACTCTGCCTTTTCCTTTGAAACACAACCTGATGGGGCCTCTGGGGAGCCTCTCTGCCACCATTCCTTTTAAGATAATCTGTATGCTGGACTTATATCACTTTCTTCGGTTCTTGTTAATCTATGATCCTCGTATTTGTTTCTTGCTCTACGAAGTTGCAATATTATGATTTATGAAATTTTCTTGAGAAATATCTGGATTGAAAAAGAACTTCATCTGAAGGTCAGGTGACAAACTTCTGTATAGCCCTTCTCTTTTGTACTTTCATATCTCTCATTGGAAGTTGGTTGCTTATCCCATAGTATAAAATGGGGTATAATGCTTTGCTTGAGATAATTTTTTTTATGACATCATCTTCATTCCCTTGCTATGTTATAACCATGCAATTTTGTTCCCAACCAGCTTTAGATTTTAGTCAAAGGCATACCTTGCTTCATCACAGACGCAGTCATGAAAGCTCTTGCAAGCATATTGTGTTTAGCACATTCACAATTATGTTACGTTTGTTGGGTTTCATCTGAATCTGGAACTATTTCCCTTCTTTTCCATAAAATGAATATTTATTTGTTTGTATAGGAAAGCTTCTGTATATTACAATAATTCGCTCTTCCATAGTTGTTTGTTGAAGAAGCATGAACATATTGTGCATCACAATAATCTGTTTTGCCATAGGTATTTTGCTGAACAATTTGAGCATTACGTTCTAATATCTATTGATTATTTAAGTGACAGGCGTTTGTGTAGGAGCTTTAAATGGATATACTAAGTTCTATTATACGTATATATTAATTTTTATTTTGGGTTTGTCAAGGGATATGCGTTGATTGAATACGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGGGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGTATGCATCTCCAAAATCTATTCAAGATCTGCAAAGGGAATTATCGAAGATTGCATCAAAGGAAATTCATAATCGATATGTATATTTTATATATATATATTTTCTAATTTAATTGCAGGCCTGCTCGAGAACGACGTTCAAGGAGCCCTAGGAGGAGATACTGA

mRNA sequence

ATGGCGAGCGCTGATGTAGAGGCTGTCGATTTCGAGCCCGAGGAAGATGACCTCATGGACGAGGATGGTGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCGCTTGCTGGTGGTCCAAAGAAGACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGATTTCGATTCCCTCAAGTCTGCTGATGGCCCTGGACCTCAACGATCTATTGAAGGATGGATCATTCTGGTGACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGACTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGGGTTCGTGAAGGGATATGCGTTGATTGAATACGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGGGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGCCTGCTCGAGAACGACGTTCAAGGAGCCCTAGGAGGAGATACTGA

Coding sequence (CDS)

ATGGCGAGCGCTGATGTAGAGGCTGTCGATTTCGAGCCCGAGGAAGATGACCTCATGGACGAGGATGGTGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCGCTTGCTGGTGGTCCAAAGAAGACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGATTTCGATTCCCTCAAGTCTGCTGATGGCCCTGGACCTCAACGATCTATTGAAGGATGGATCATTCTGGTGACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGACTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGGGTTCGTGAAGGGATATGCGTTGATTGAATACGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGGGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGCCTGCTCGAGAACGACGTTCAAGGAGCCCTAGGAGGAGATACTGA

Protein sequence

MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
Homology
[Close]
BLAST of Bhi02G001288 vs. TAIR 10
Match: AT1G51510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 251.1 bits (640), Expect = 7.2e-67
Identity = 141/206 (68.45%), Postives = 161/206 (78.16%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGGPKKTK 60
           MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTK
Sbjct: 1   MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES----AKKTK 60

Query: 61  GRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 120
           GRGFR+E  SDR  RL+  DF+SL S   PGPQRS+EGWIILV+GVHEE QE+D+ NAFG
Sbjct: 61  GRGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFG 120

Query: 121 DFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP 180
           DFGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP
Sbjct: 121 DFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGP 180

Query: 181 -----IRRKNTRPARERRSRSPRRRY 198
                 RRKN+R  R +RSRSPRRRY
Sbjct: 181 SGGESYRRKNSRYGRSQRSRSPRRRY 202

[Close]
BLAST of Bhi02G001288 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08
Identity = 25/75 (33.33%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 97  ILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAM 156
           + + G+     ED L+ AF  +GE+ +  + LDR TG  +G+  + + S E A  AI A+
Sbjct: 42  LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101

Query: 157 DGAELLTQIINVDWA 172
           DG +L  +++ V++A
Sbjct: 102 DGRDLHGRVVKVNYA 116

[Close]
BLAST of Bhi02G001288 vs. TAIR 10
Match: AT5G64200.1 (ortholog of human splicing factor SC35 )

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08
Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 0 

Query: 87  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESF 146
           GP    + + +LV  +      DDL   F  +G++ ++ +  DRRTG  +G+A + Y+  
Sbjct: 8   GPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYK 67

Query: 147 EEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR--------PARERRSRSPRR 196
           +EA KA+  +DG  +  + I V +A  +GP   K ++         +R  RSRSPRR
Sbjct: 68  DEAHKAVERLDGRVVDGREITVQFA-KYGPNAEKISKGRVVEPPPKSRRSRSRSPRR 123

[Close]
BLAST of Bhi02G001288 vs. TAIR 10
Match: AT5G64200.2 (ortholog of human splicing factor SC35 )

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08
Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 0 

Query: 87  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESF 146
           GP    + + +LV  +      DDL   F  +G++ ++ +  DRRTG  +G+A + Y+  
Sbjct: 8   GPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYK 67

Query: 147 EEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR--------PARERRSRSPRR 196
           +EA KA+  +DG  +  + I V +A  +GP   K ++         +R  RSRSPRR
Sbjct: 68  DEAHKAVERLDGRVVDGREITVQFA-KYGPNAEKISKGRVVEPPPKSRRSRSRSPRR 123

[Close]
BLAST of Bhi02G001288 vs. TAIR 10
Match: AT3G11400.1 (eukaryotic translation initiation factor 3G1 )

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0 

Query: 45  GASSSLAGGPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHE 104
           G SS+++  P   K   +   S R    AG+D    +SA G   +R  +   + VT + E
Sbjct: 172 GESSTMSAAPGTGKA-AYVPPSMR----AGAD----RSAVGSDMRRRNDENSVRVTNLSE 231

Query: 105 EAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQ 164
           + +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      
Sbjct: 232 DTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNL 289

Query: 165 IINVDWA 172
           I+ V+WA
Sbjct: 292 ILRVEWA 289

[Close]
BLAST of Bhi02G001288 vs. ExPASy Swiss-Prot
Match: B7FAL5 (RNA-binding protein Y14A OS=Oryza sativa subsp. japonica OX=39947 GN=Y14A PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.0e-66
Identity = 140/205 (68.29%), Postives = 164/205 (80.00%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG--GPKKTK 60
           + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G  G +KTK
Sbjct: 4   VTNADVEAVDFDPDDDDLMDEDA---ADPTP-APAPRLRSTIAGGGGGGGGGDDGQRKTK 63

Query: 61  GRGFRDE-SDRNTRLAG----SDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 120
           GRGFRD+ + R++RLAG    SDFDSL S  GPGP RSIEGWI+LVTGVHEEAQEDDL N
Sbjct: 64  GRGFRDDAAPRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQEDDLHN 123

Query: 121 AFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFS 180
            F DFG++KNLHLNLDRRTGFVKGYALIEYE+FEEA+ AI A+DG ELLTQII+VDWAFS
Sbjct: 124 IFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFS 183

Query: 181 HGPIRRKNTRPARERRSRS-PRRRY 198
           +GP++R+N R    RRSRS PRRRY
Sbjct: 184 NGPVKRRNIRKRSPRRSRSPPRRRY 204

[Close]
BLAST of Bhi02G001288 vs. ExPASy Swiss-Prot
Match: F4I9J7 (RNA-binding protein Y14 OS=Arabidopsis thaliana OX=3702 GN=Y14 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-65
Identity = 141/206 (68.45%), Postives = 161/206 (78.16%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGGPKKTK 60
           MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTK
Sbjct: 1   MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGES----AKKTK 60

Query: 61  GRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 120
           GRGFR+E  SDR  RL+  DF+SL S   PGPQRS+EGWIILV+GVHEE QE+D+ NAFG
Sbjct: 61  GRGFREEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFG 120

Query: 121 DFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP 180
           DFGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP
Sbjct: 121 DFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGP 180

Query: 181 -----IRRKNTRPARERRSRSPRRRY 198
                 RRKN+R  R +RSRSPRRRY
Sbjct: 181 SGGESYRRKNSRYGRSQRSRSPRRRY 202

[Close]
BLAST of Bhi02G001288 vs. ExPASy Swiss-Prot
Match: Q6ATR0 (RNA-binding protein Y14B OS=Oryza sativa subsp. japonica OX=39947 GN=Y14B PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 101/203 (49.75%), Postives = 129/203 (63.55%), Query Frame = 0 

Query: 2   ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTK 61
           A+ DVE VD+   E EE+D MDED           P P + S            G  +++
Sbjct: 4   AAEDVEFVDYDRDEEEEEDAMDEDDRGGGRGGRALPVPHIVSQ-----------GVMRSR 63

Query: 62  GRGFRDESDRNTRLAGSD---FDSLKSADGP--GPQRSIEGWIILVTGVHEEAQEDDLQN 121
           GR       R+T +  S+   FDSL  A  P  GPQRSIEGWI+LV+GV E+A+EDDL N
Sbjct: 64  GRLL----GRSTSVLASNRDRFDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYN 123

Query: 122 AFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFS 181
            F DFG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI AM+G +LLT+ + VDWAFS
Sbjct: 124 TFSDFGHVKDLHLNLERRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFS 183

Query: 182 HGPIRRKNTRPARERRSRSPRRR 197
            GPI++  +     RRSR+P RR
Sbjct: 184 RGPIQKLTSTRPLHRRSRTPPRR 191

[Close]
BLAST of Bhi02G001288 vs. ExPASy Swiss-Prot
Match: Q6PH90 (RNA-binding protein 8A-B OS=Xenopus laevis OX=8355 GN=rbm8a-b PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-38
Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 0 

Query: 55  KKTKGRGFRDESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 114
           KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ +
Sbjct: 33  KKRKGRGFGADEGTRTRIR-EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHD 92

Query: 115 AFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFS 174
            FG+FGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+  ++G +L+ Q ++VDW F 
Sbjct: 93  KFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFV 152

Query: 175 HGPIRRKNTRPARERRSRSPRRR 197
            GP   K  R +  RRSRSP RR
Sbjct: 153 RGP--PKGKRRSGRRRSRSPERR 172

[Close]
BLAST of Bhi02G001288 vs. ExPASy Swiss-Prot
Match: Q5D018 (RNA-binding protein 8A OS=Danio rerio OX=7955 GN=rbm8a PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.2e-38
Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 0 

Query: 55  KKTKGRGFRDESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 114
           KK KGRGF  E    +R+   D+D++ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ +
Sbjct: 33  KKRKGRGFGSEEGARSRVR-EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHD 92

Query: 115 AFGDFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFS 174
            F +FGEIKNLHLNLDRRTG++KGYAL+EYE+++EA+ A+  ++G EL+ Q I+VDW F 
Sbjct: 93  KFAEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFV 152

Query: 175 HGPIRRKNTRPARERRSRSPRRR 197
            GP   K+ R    RRSRSP RR
Sbjct: 153 RGP--PKSKRRGGRRRSRSPDRR 172

[Close]
BLAST of Bhi02G001288 vs. NCBI nr
Match: XP_038880227.1 (RNA-binding protein Y14A [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRPARERRSRSPRRRY
Sbjct: 181 NTRPARERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. NCBI nr
Match: XP_004139049.1 (RNA-binding protein Y14 [Cucumis sativus] >XP_008450386.1 PREDICTED: RNA-binding protein 8A-B [Cucumis melo] >KGN66511.1 hypothetical protein Csa_007313 [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+GGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           N RPARERRSRSPRRRY
Sbjct: 181 NARPARERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. NCBI nr
Match: XP_022961208.1 (RNA-binding protein Y14-like [Cucurbita moschata] >XP_023516370.1 RNA-binding protein Y14-like [Cucurbita pepo subsp. pepo] >KAG6590187.1 RNA-binding protein Y14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023840.1 RNA-binding protein Y14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 190/197 (96.45%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. NCBI nr
Match: XP_022154366.1 (RNA-binding protein Y14A [Momordica charantia])

HSP 1 Score: 370.9 bits (951), Expect = 6.7e-99
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA GPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAERAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 196

[Close]
BLAST of Bhi02G001288 vs. NCBI nr
Match: XP_022988215.1 (RNA-binding protein Y14A-like [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-98
Identity = 189/197 (95.94%), Postives = 193/197 (97.97%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLAGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPLAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFRQESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. ExPASy TrEMBL
Match: A0A0A0M2V3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616290 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.9e-101
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+GGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           N RPARERRSRSPRRRY
Sbjct: 181 NARPARERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. ExPASy TrEMBL
Match: A0A1S3BNH9 (RNA-binding protein 8A-B OS=Cucumis melo OX=3656 GN=LOC103492008 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.9e-101
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+GGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           N RPARERRSRSPRRRY
Sbjct: 181 NARPARERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. ExPASy TrEMBL
Match: A0A6J1HB67 (RNA-binding protein Y14-like OS=Cucurbita moschata OX=3662 GN=LOC111461789 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.5e-100
Identity = 190/197 (96.45%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

[Close]
BLAST of Bhi02G001288 vs. ExPASy TrEMBL
Match: A0A6J1DNH7 (RNA-binding protein Y14A OS=Momordica charantia OX=3673 GN=LOC111021647 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA GPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLA-GPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           IKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAERAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 196

[Close]
BLAST of Bhi02G001288 vs. ExPASy TrEMBL
Match: A0A6J1JIZ0 (RNA-binding protein Y14A-like OS=Cucurbita maxima OX=3661 GN=LOC111485519 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.2e-99
Identity = 189/197 (95.94%), Postives = 193/197 (97.97%), Query Frame = 0 

Query: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR 60
           MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLAGGPKKTKGR
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADASPLAPFPKLKSAITGGASSSLAGGPKKTKGR 60

Query: 61  GFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGE 120
           GFR ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG+FGE
Sbjct: 61  GFRQESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE 120

Query: 121 IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180
           I+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRK
Sbjct: 121 IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK 180

Query: 181 NTRPARERRSRSPRRRY 198
           NTRP RERRSRSPRRRY
Sbjct: 181 NTRPTRERRSRSPRRRY 197

The following BLAST results are available for this feature:
BLAST of Bhi02G001288 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G51510.17.2e-6768.45RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G61030.12.0e-0833.33glycine-rich RNA-binding protein 3 [more]
AT5G64200.12.0e-0831.62ortholog of human splicing factor SC35 [more]
AT5G64200.22.0e-0831.62ortholog of human splicing factor SC35 [more]
AT3G11400.12.6e-0829.13eukaryotic translation initiation factor 3G1 [more]
BLAST of Bhi02G001288 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B7FAL52.0e-6668.29RNA-binding protein Y14A OS=Oryza sativa subsp. japonica OX=39947 GN=Y14A PE=1 S... [more]
F4I9J71.0e-6568.45RNA-binding protein Y14 OS=Arabidopsis thaliana OX=3702 GN=Y14 PE=1 SV=1[more]
Q6ATR01.5e-4049.75RNA-binding protein Y14B OS=Oryza sativa subsp. japonica OX=39947 GN=Y14B PE=1 S... [more]
Q6PH901.8e-3856.64RNA-binding protein 8A-B OS=Xenopus laevis OX=8355 GN=rbm8a-b PE=2 SV=1[more]
Q5D0185.2e-3856.64RNA-binding protein 8A OS=Danio rerio OX=7955 GN=rbm8a PE=2 SV=1[more]
BLAST of Bhi02G001288 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880227.11.7e-102100.00RNA-binding protein Y14A [Benincasa hispida][more]
XP_004139049.11.2e-10097.97RNA-binding protein Y14 [Cucumis sativus] >XP_008450386.1 PREDICTED: RNA-binding... [more]
XP_022961208.11.3e-9996.45RNA-binding protein Y14-like [Cucurbita moschata] >XP_023516370.1 RNA-binding pr... [more]
XP_022154366.16.7e-9997.46RNA-binding protein Y14A [Momordica charantia][more]
XP_022988215.11.5e-9895.94RNA-binding protein Y14A-like [Cucurbita maxima][more]
BLAST of Bhi02G001288 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2V35.9e-10197.97RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616290 PE=4 SV... [more]
A0A1S3BNH95.9e-10197.97RNA-binding protein 8A-B OS=Cucumis melo OX=3656 GN=LOC103492008 PE=4 SV=1[more]
A0A6J1HB676.5e-10096.45RNA-binding protein Y14-like OS=Cucurbita moschata OX=3662 GN=LOC111461789 PE=4 ... [more]
A0A6J1DNH73.2e-9997.46RNA-binding protein Y14A OS=Momordica charantia OX=3673 GN=LOC111021647 PE=4 SV=... [more]
A0A6J1JIZ07.2e-9995.94RNA-binding protein Y14A-like OS=Cucurbita maxima OX=3661 GN=LOC111485519 PE=4 S... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008111RNA-binding motif protein 8PRINTSPR01738RNABINDINGM8coord: 51..63
score: 50.77
coord: 86..100
score: 79.33
coord: 160..172
score: 55.38
coord: 142..158
score: 44.12
IPR008111RNA-binding motif protein 8PANTHERPTHR45894RNA-BINDING PROTEIN 8Acoord: 2..197
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 96..169
e-value: 9.8E-19
score: 78.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 97..161
e-value: 2.4E-15
score: 56.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 95..173
score: 15.579141
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 44..190
e-value: 2.2E-29
score: 104.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availablePANTHERPTHR45894:SF6RNA-BINDING PROTEIN Y14A-LIKEcoord: 2..197
IPR033744RBM8, RNA recognition motifCDDcd12324RRM_RBM8coord: 89..176
e-value: 1.488E-60
score: 181.647
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 88..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001288Bhi02M001288mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010628 positive regulation of gene expression
biological_process GO:0008380 RNA splicing
biological_process GO:0006396 RNA processing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0035145 exon-exon junction complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding