Bhi02G001103 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G001103
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8
Location	chr2: 32710230 .. 32710626 (-)
RNA-Seq Expression	Bhi02G001103
Synteny	Bhi02G001103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCAGAACCGGAACCGGCTCAGGGTCAAAGTACCCTAGTCATAATGACAATGAGTATGTTGAAGGTGATATAGGGGACTCAGGTGAAGTCAGAGATGATGACAGTGCAGTCAGGGATGATGGCAATAATGAAGCGCCCAGTGGTGCTCAGGGAACTGAAAATGAACAACAGTTGGGTACAGATCAACAGGTTGACAAGACCAATGAGATTGAGGTTGATGTTACCTTGGATTTGCCGATAGCTCTGCGAAAAGGTACTAGGTCATGCACTAAACACTCTATGACAAGCTTTTTGTCTTATAGTAACCTGTCTACGAGATTTACAGCTTTCACCACCAGCCTGGATAATGTGATAATTCCGGACAATGTGCACAAGGCTCCGAAAATTTCTGAATGA

mRNA sequence

CGTCAGAACCGGAACCGGCTCAGGGTCAAAGTACCCTAGTCATAATGACAATGAGTATGTTGAAGGTGATATAGGGGACTCAGGTGAAGTCAGAGATGATGACAGTGCAGTCAGGGATGATGGCAATAATGAAGCGCCCAGTGGTGCTCAGGGAACTGAAAATGAACAACAGTTGGGTACAGATCAACAGGTTGACAAGACCAATGAGATTGAGGTTGATGTTACCTTGGATTTGCCGATAGCTCTGCGAAAAGGTACTAGGTCATGCACTAAACACTCTATGACAAGCTTTTTGTCTTATAGTAACCTGTCTACGAGATTTACAGCTTTCACCACCAGCCTGGATAATGTGATAATTCCGGACAATGTGCACAAGGCTCCGAAAATTTCTGAATGA

Coding sequence (CDS)

CGTCAGAACCGGAACCGGCTCAGGGTCAAAGTACCCTAGTCATAATGACAATGAGTATGTTGAAGGTGATATAGGGGACTCAGGTGAAGTCAGAGATGATGACAGTGCAGTCAGGGATGATGGCAATAATGAAGCGCCCAGTGGTGCTCAGGGAACTGAAAATGAACAACAGTTGGGTACAGATCAACAGGTTGACAAGACCAATGAGATTGAGGTTGATGTTACCTTGGATTTGCCGATAGCTCTGCGAAAAGGTACTAGGTCATGCACTAAACACTCTATGACAAGCTTTTTGTCTTATAGTAACCTGTCTACGAGATTTACAGCTTTCACCACCAGCCTGGATAATGTGATAATTCCGGACAATGTGCACAAGGCTCCGAAAATTTCTGAATGA

Protein sequence

VRTGTGSGSKYPSHNDNEYVEGDIGDSGEVRDDDSAVRDDGNNEAPSGAQGTENEQQLGTDQQVDKTNEIEVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVIIPDNVHKAPKISE

Homology

[Close]

BLAST of Bhi02G001103 vs. NCBI nr
Match: XP_038884509.1 (uncharacterized protein LOC120075312 [Benincasa hispida])

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-27
Identity = 78/117 (66.67%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 15  NDNEYVEGDIGDSGEVRDDDSAVRDDGNNEAPSGAQGTENEQQLGTDQQVDKTNEIEVDV 74
           +DNEYVEGD+ +SG+       VR DG  E     QGTEN QQLGTD+QVDKT+EI  D 
Sbjct: 202 DDNEYVEGDVVNSGK-------VRIDGGGEFSGDTQGTENVQQLGTDKQVDKTSEI--DA 261

Query: 75  TLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVIIPDNVHKAPKISE 132
           TLDL I LRKGTRS TKHSM +FLSYSNLSTRF AFTTSLD V+IP NVHKA ++ E
Sbjct: 262 TLDLLITLRKGTRSYTKHSMKNFLSYSNLSTRFKAFTTSLDTVMIPGNVHKALEVPE 309

[Close]

BLAST of Bhi02G001103 vs. NCBI nr
Match: WP_217833318.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-11
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 60  TDQQVDKTNEIEVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVII 119
           T ++++K    E D TLDLPIALRKGT+SCT++ M SFLSY+NLS++F AFT S D V I
Sbjct: 24  TGEELNKPG--ECDATLDLPIALRKGTKSCTRYPMYSFLSYNNLSSKFRAFTGSFDTVTI 83

Query: 120 PDNVHKAPKISE 132
           P N++ A +I E
Sbjct: 84  PKNIYVAMEIHE 93

[Close]

BLAST of Bhi02G001103 vs. NCBI nr
Match: ADN34014.1 (reverse transcriptase [Cucumis melo subsp. melo])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-11
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 54  NEQQLGTDQQVDKTNEIEVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTS 113
           N+ + G   ++DK      D +LDLPIALRKGTRSCTKHS+++++SY NLS +F AFTTS
Sbjct: 116 NKVEQGHTGKIDK-----YDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTTS 175

Query: 114 LDNVIIPDNVHKA 127
           LD+  IP N+H A
Sbjct: 176 LDSTTIPKNIHIA 183

[Close]

BLAST of Bhi02G001103 vs. NCBI nr
Match: KAA0045705.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ99577.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-11
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 54  NEQQLGTDQQVDKTNEIEVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTS 113
           N+ + G   ++DK      D +LDLPIALRKGTRSCTKHS+++++SY NLS +F AFTTS
Sbjct: 116 NKVEQGHTGKIDK-----YDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTTS 175

Query: 114 LDNVIIPDNVHKA 127
           LD+  IP N+H A
Sbjct: 176 LDSTTIPKNIHIA 183

[Close]

BLAST of Bhi02G001103 vs. NCBI nr
Match: KAA0057710.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK27496.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-11
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 71  EVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVIIPDNVHKAPKIS 130
           E D +LDLPIALRKGTRSCTKHS+++++SY NLS RF AFT SLD+  IP N++ A +  
Sbjct: 522 EYDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPRFRAFTVSLDSTTIPKNIYIALECH 581

Query: 131 E 132
           E
Sbjct: 582 E 582

[Close]

BLAST of Bhi02G001103 vs. ExPASy TrEMBL
Match: A0A5D3BKC1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001470 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 54  NEQQLGTDQQVDKTNEIEVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTS 113
           N+ + G   ++DK      D +LDLPIALRKGTRSCTKHS+++++SY NLS +F AFTTS
Sbjct: 116 NKVEQGHTGKIDK-----YDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTTS 175

Query: 114 LDNVIIPDNVHKA 127
           LD+  IP N+H A
Sbjct: 176 LDSTTIPKNIHIA 183

[Close]

BLAST of Bhi02G001103 vs. ExPASy TrEMBL
Match: E5GC16 (Reverse transcriptase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 54  NEQQLGTDQQVDKTNEIEVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTS 113
           N+ + G   ++DK      D +LDLPIALRKGTRSCTKHS+++++SY NLS +F AFTTS
Sbjct: 116 NKVEQGHTGKIDK-----YDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTTS 175

Query: 114 LDNVIIPDNVHKA 127
           LD+  IP N+H A
Sbjct: 176 LDSTTIPKNIHIA 183

[Close]

BLAST of Bhi02G001103 vs. ExPASy TrEMBL
Match: A0A5D3DUU3 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00520 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.8e-11
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 71  EVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVIIPDNVHKAPKIS 130
           E D +LDLPIALRKGTRSCTKHS+++++SY NLS RF AFT SLD+  IP N++ A +  
Sbjct: 522 EYDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPRFRAFTVSLDSTTIPKNIYIALECH 581

Query: 131 E 132
           E
Sbjct: 582 E 582

[Close]

BLAST of Bhi02G001103 vs. ExPASy TrEMBL
Match: A0A5D3C5B5 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00650 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.4e-11
Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 73   DVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVIIPDNVHKAPKISE 132
            D++LDLPIALRKGTRSCTKHS+++++SY NLS +F AFT SLD+  IP N++ A +  E
Sbjct: 1346 DLSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIYMALECPE 1404

[Close]

BLAST of Bhi02G001103 vs. ExPASy TrEMBL
Match: A0A5A7THD7 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00800 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 71  EVDVTLDLPIALRKGTRSCTKHSMTSFLSYSNLSTRFTAFTTSLDNVIIPDNVHKA 127
           E D +LD+PIALRKGTRSCTKH + + +SY NLS +FTAFT SLD+ IIP N++ A
Sbjct: 314 EYDPSLDIPIALRKGTRSCTKHPICNHVSYDNLSPQFTAFTASLDSTIIPKNIYTA 369

The following BLAST results are available for this feature:

BLAST of Bhi02G001103 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G001103 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi02G001103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884509.1	5.9e-27	66.67	uncharacterized protein LOC120075312 [Benincasa hispida]	[more]
WP_217833318.1	5.9e-11	56.94	hypothetical protein, partial [Synechococcus sp. PCC 7002]	[more]
ADN34014.1	5.9e-11	56.16	reverse transcriptase [Cucumis melo subsp. melo]	[more]
KAA0045705.1	5.9e-11	56.16	reverse transcriptase [Cucumis melo var. makuwa] >TYJ99577.1 reverse transcripta...	[more]
KAA0057710.1	7.8e-11	62.30	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] >T...	[more]

BLAST of Bhi02G001103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKC1	2.9e-11	56.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12...	[more]
E5GC16	2.9e-11	56.16	Reverse transcriptase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DUU3	3.8e-11	62.30	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C5B5	8.4e-11	61.02	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7THD7	1.9e-10	64.29	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001103	Bhi02M001103	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003953	NAD+ nucleosidase activity
molecular_function	GO:0003676	nucleic acid binding