Bhi02G000195 (gene) Wax gourd (B227) v1

Overview
NameBhi02G000195
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionIntegrase catalytic domain-containing protein
Locationchr2: 5409803 .. 5410523 (+)
RNA-Seq ExpressionBhi02G000195
SyntenyBhi02G000195
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATTTTTTGCCAAAACAGGAACTACTCATCAGTTCTCCTGTGCATATACTCTTCAACAGAATTCAGTGGTTGAAAGCAAACATCAACACCTCCTCAACGTTGCAAGAGCCCTAATGTTTCAGTTCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCTCACTGCAGCATACTTAATCAACAGAACACCTATGGTTTTACTATCCAACAGCACTCCCTATGTTGTTCTGTTTAACAAAATTGTTGACTATGGCTTCATAAAGACATTTGGATGCCTTGCCTATGCTTCTACACCAATAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGATATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAGTCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCACTTTGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAGGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCCTACCACCCAAACAACCATTCCCATAGCCCCAAGAAGGTCATCGAGAGCACATTACCCACCTCCTACCTAA

mRNA sequence

AGAATTTTTTGCCAAAACAGGAACTACTCATCAGTTCTCCTGTGCATATACTCTTCAACAGAATTCAGTGGTTGAAAGCAAACATCAACACCTCCTCAACGTTGCAAGAGCCCTAATGTTTCAGTTCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCTCACTGCAGCATACTTAATCAACAGAACACCTATGGTTTTACTATCCAACAGCACTCCCTATGTTGTTCTGTTTAACAAAATTGTTGACTATGGCTTCATAAAGACATTTGGATGCCTTGCCTATGCTTCTACACCAATAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGATATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAGTCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCACTTTGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAGGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCCTACCACCCAAACAACCATTCCCATAGCCCCAAGAAGGTCATCGAGAGCACATTACCCACCTCCTACCTAA

Coding sequence (CDS)

AGAATTTTTTGCCAAAACAGGAACTACTCATCAGTTCTCCTGTGCATATACTCTTCAACAGAATTCAGTGGTTGAAAGCAAACATCAACACCTCCTCAACGTTGCAAGAGCCCTAATGTTTCAGTTCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCTCACTGCAGCATACTTAATCAACAGAACACCTATGGTTTTACTATCCAACAGCACTCCCTATGTTGTTCTGTTTAACAAAATTGTTGACTATGGCTTCATAAAGACATTTGGATGCCTTGCCTATGCTTCTACACCAATAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGATATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAGTCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCACTTTGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAGGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCCTACCACCCAAACAACCATTCCCATAGCCCCAAGAAGGTCATCGAGAGCACATTACCCACCTCCTACCTAA

Protein sequence

EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLINRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPSDIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHFENKGITENLVVNTLERLCEDNHGIDDSQPHIETSEETNPTTQTTIPIAPRRSSRAHYPPPT
Homology
BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.2e-24
Identity = 75/246 (30.49%), Postives = 122/246 (49.59%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           E+ +  G  H+ +   T Q N V E  ++ ++   R+++    +P +FWGE + TA YLI
Sbjct: 562 EYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLI 621

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NR+P V L+   P  V  NK V Y  +K FGC A+A  P   R+K D ++ PC+F+GY  
Sbjct: 622 NRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGD 681

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFV-IPS------- 180
           +  GY+L+D  K     SRDV+F E     ++  + ++ + +  I +FV IPS       
Sbjct: 682 EEFGYRLWDPVKKKVIRSRDVVFRESE--VRTAADMSEKVKNGIIPNFVTIPSTSNNPTS 741

Query: 181 --PLFDHFENKGITENLVVNTLERLCEDNHGIDDSQPHIETSEETNPTTQTTIP-IAPRR 236
                D    +G     V+   E+L E   G+++ +   +  E+  P  ++  P +  RR
Sbjct: 742 AESTTDEVSEQGEQPGEVIEQGEQLDE---GVEEVEHPTQGEEQHQPLRRSERPRVESRR 801

BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-21
Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           E+F++ G +H  S  +T + N + E KH+H++     L+   ++P T+W      A YLI
Sbjct: 602 EYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLI 661

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NR P  LL   +P+  LF    +Y  ++ FGC  Y      N+ K D ++R CVF+GY  
Sbjct: 662 NRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSL 721

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSP 174
               Y    +     +ISR V F E  FPF +      P+     +   + SP
Sbjct: 722 TQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSP 774

BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18
Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           ++ ++ G +H  S  +T + N + E KH+H++ +   L+   +VP T+W      A YLI
Sbjct: 581 DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLI 640

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NR P  LL   +P+  LF +  +Y  +K FGC  Y      NR K + +++ C FMGY  
Sbjct: 641 NRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSL 700

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQS 153
               Y    +     + SR V F E  FPF +
Sbjct: 701 TQSAYLCLHIPTGRLYTSRHVQFDERCFPFST 732

BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 4.9e-14
Identity = 56/178 (31.46%), Postives = 86/178 (48.31%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           +F  K G ++  +  +T Q N V E   + +   AR ++    +  +FWGE +LTA YLI
Sbjct: 562 QFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLI 621

Query: 61  NRTPMVLL--SNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNR-SKFDPRARPCVFMG 120
           NR P   L  S+ TPY +  NK      ++ FG   Y    I N+  KFD ++   +F+G
Sbjct: 622 NRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVH--IKNKQGKFDDKSFKSIFVG 681

Query: 121 YPSDIKGYKLYDMTKMTFFISRDVLF------------FEERFPFQSVKEDNKPISHD 164
           Y  +  G+KL+D     F ++RDV+             FE  F   S + +NK   +D
Sbjct: 682 Y--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPND 735

BLAST of Bhi02G000195 vs. NCBI nr
Match: KAA0037194.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK13878.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-52
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           EFF KT TTHQFSCAYT QQN+VVE KHQHLLN+ARALMFQ NVPLTFWGEC+LTAAYLI
Sbjct: 192 EFFTKTETTHQFSCAYTPQQNAVVERKHQHLLNMARALMFQSNVPLTFWGECVLTAAYLI 251

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NRTPMVLLSN+T Y VLFNK VDYGFIKTFG LAYASTP V R+KFDPRARPCVFMGYPS
Sbjct: 252 NRTPMVLLSNNTLYTVLFNKTVDYGFIKTFGSLAYASTPTVYRNKFDPRARPCVFMGYPS 311

BLAST of Bhi02G000195 vs. NCBI nr
Match: KAG7571875.1 (Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis suecica])

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-48
Identity = 105/238 (44.12%), Postives = 151/238 (63.45%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           EF  + G  HQFSCAYT QQNSVVE KHQHLLN+AR+L+FQ NVPL +W +C+LTAAYLI
Sbjct: 635 EFVKEQGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLI 694

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NR P  LL N +P+ +L  K+ DY  +K+FGCL YAST + +R+KF PRA+P VF+GYPS
Sbjct: 695 NRLPSPLLQNKSPFELLLKKVPDYSLLKSFGCLCYASTNVHDRNKFSPRAKPGVFLGYPS 754

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHF-E 180
             KGYK+ D+   +  I+R+V+F+E  +PF++ +  +K +  D   + ++P P   HF E
Sbjct: 755 GYKGYKILDLESHSVIITRNVVFYENEYPFKTSESLSKTV--DMFPNTILPLPAPLHFVE 814

Query: 181 NKGITENLVVNTLERLCEDNHGIDDSQPHIETSEETNPTTQ---TTIPIA-PRRSSRA 234
           +  +     V   E     +  +    P    + +   T      ++PIA P+R+++A
Sbjct: 815 SMPLDHEFPVALPENHASTSASLSQLAPGTNINTQNTETLDKDIDSVPIARPKRATKA 870

BLAST of Bhi02G000195 vs. NCBI nr
Match: AAC33963.1 (contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis thaliana])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46
Identity = 108/240 (45.00%), Postives = 154/240 (64.17%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           +F  + G  HQFSCAYT QQNSVVE KHQHLLN+AR+L+FQ NVPL +W +C+LTAAYLI
Sbjct: 634 KFVKEQGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLI 693

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NR P  LL N TP+ +L  KI DY  +K+  CL YAST + +R+KF PRARPCVF+GYPS
Sbjct: 694 NRLPSPLLDNKTPFELLLKKIPDYTLLKS--CLCYASTNVHDRNKFSPRARPCVFLGYPS 753

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHF-E 180
             KGYK+ D+   +  I+R+V+F E +FPF++ K   + +  D   + ++P P   HF E
Sbjct: 754 GYKGYKVLDLESHSISITRNVVFHETKFPFKTSKFLKESV--DMFPNSILPLPAPLHFVE 813

Query: 181 NKGITENLVVNTLERLCEDNHGIDDSQPHIETSEETNPT-----TQTTIPIA-PRRSSRA 234
           +  + ++L  +       ++     S P + ++  T  T        ++PIA P+R+++A
Sbjct: 814 SMPLDDDLRADDNNASTSNSASSASSIPPLPSTVNTQNTDALDIDTNSVPIARPKRNAKA 869

BLAST of Bhi02G000195 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-46
Identity = 106/219 (48.40%), Postives = 130/219 (59.36%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           EFF   G  HQFSC    +QNSVVE KHQHLLNVAR+L FQ  VP  FWGEC+LTAAYLI
Sbjct: 395 EFFHSKGVLHQFSCVGCPEQNSVVERKHQHLLNVARSLYFQSRVPTAFWGECVLTAAYLI 454

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NRTP  +L  +TPY  L+    DY  +K FGCL + ST  VNRSKF PRA   VF+GYP 
Sbjct: 455 NRTPTPVLDWNTPYARLYGHSADYSSLKVFGCLCFVSTSPVNRSKFHPRALTSVFVGYPP 514

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHFEN 180
            +KGYKLYD+    FF+SRDV+F E  FPF +V                + SP+ D F  
Sbjct: 515 GMKGYKLYDIENKRFFVSRDVIFHESIFPFHTVS---------------VNSPIVDPFPG 574

Query: 181 KGITENL-VVNTLERLCEDNHGIDDSQPHIETSEETNPT 219
             I ++  +V+T     +D+H          TS + +PT
Sbjct: 575 VVIPKSYDLVDTSSGAPDDHHNYATGSAVSPTSADISPT 598

BLAST of Bhi02G000195 vs. NCBI nr
Match: CAA7015607.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-46
Identity = 105/230 (45.65%), Postives = 142/230 (61.74%), Query Frame = 0

Query: 7   GTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLINRTPMV 66
           G  HQ SCAYT QQNSVVE KHQHLLNVARAL+FQ NVPL++W +C+ TA +L+NR P  
Sbjct: 742 GIVHQLSCAYTPQQNSVVERKHQHLLNVARALLFQSNVPLSYWSDCVHTAVFLVNRMPSP 801

Query: 67  LLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPSDIKGYK 126
           LL+N +P+ +L  KI DY  +K+FGCL YAST + +R+KF PRA+PCVF+GYPS  KGYK
Sbjct: 802 LLNNKSPFELLLKKIPDYSLLKSFGCLCYASTLLKDRNKFSPRAKPCVFLGYPSGFKGYK 861

Query: 127 LYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHFENKGITEN 186
           + D+   +  ISR+V+F E  FPF++ +  +K +  D   + ++P P   HF      E 
Sbjct: 862 VLDLESRSVSISRNVVFTENVFPFKTSEFVSKAV--DMFPNTILPMPAPLHF-----VET 921

Query: 187 LVVNTLERLCE-------DNHGIDD---------SQPHIETSEETNPTTQ 221
           + +N  E   E        +H   D         S  H  T + +NP +Q
Sbjct: 922 MPLNCTEPDSEIDCDVRSSSHTAPDSSASSLHHASSSHPSTIQSSNPVSQ 964

BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A5A7T140 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00650 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 7.2e-53
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           EFF KT TTHQFSCAYT QQN+VVE KHQHLLN+ARALMFQ NVPLTFWGEC+LTAAYLI
Sbjct: 192 EFFTKTETTHQFSCAYTPQQNAVVERKHQHLLNMARALMFQSNVPLTFWGECVLTAAYLI 251

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NRTPMVLLSN+T Y VLFNK VDYGFIKTFG LAYASTP V R+KFDPRARPCVFMGYPS
Sbjct: 252 NRTPMVLLSNNTLYTVLFNKTVDYGFIKTFGSLAYASTPTVYRNKFDPRARPCVFMGYPS 311

BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9GUM1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33958 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 104/212 (49.06%), Postives = 135/212 (63.68%), Query Frame = 0

Query: 1   EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLI 60
           EF+   G  HQ SC  TLQQNSVVE KHQH+LNVAR+L FQ ++P+ FWG+C+LTA YLI
Sbjct: 510 EFYTSKGILHQHSCVETLQQNSVVEKKHQHILNVARSLRFQAHLPIRFWGDCVLTAVYLI 569

Query: 61  NRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPS 120
           NR P  LLS+ +PY  L +K   Y  +K FGCL +AST  V R KFDPRA+PCVF+GYP+
Sbjct: 570 NRLPSPLLSSKSPYECLLHKPPSYSHLKVFGCLCFASTLTVGRHKFDPRAKPCVFLGYPA 629

Query: 121 DIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHFEN 180
            +KGYKLYD+    FF+SRDV+F E  FPFQ     +   S       +I  P F+H  +
Sbjct: 630 SVKGYKLYDLASHQFFVSRDVVFHETTFPFQPKSLPSTTYSFTPSSSTII-EPSFNHPSS 689

Query: 181 K---GITENLVVNTLERLCEDNHGIDDSQPHI 210
                I++   +++L     D+H    S P+I
Sbjct: 690 STLPPISDPFNISSL-----DSHDASVSNPYI 715

BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9G3P0 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21852 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 102/183 (55.74%), Postives = 121/183 (66.12%), Query Frame = 0

Query: 2   FFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLIN 61
           FF+  G THQ SC  T QQNSVVE KHQH+LNVAR+L FQ N+P+ FWG CI TA YLIN
Sbjct: 645 FFSSKGITHQHSCVETPQQNSVVERKHQHILNVARSLCFQSNLPIQFWGNCIQTAVYLIN 704

Query: 62  RTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPSD 121
           R P  +LSN +PY  L +K+  Y  +K FGCL YAST   +R+KFDPRA PCVF+GYP D
Sbjct: 705 RLPCPILSNKSPYEALLHKLPTYSHLKVFGCLCYASTLTAHRTKFDPRAIPCVFLGYPPD 764

Query: 122 IKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKE-----DNKPISHDFIDHFVIPSPLFD 180
           +KGYKL ++    + ISRDV+F E  FPFQS         N   SHDF       S LF+
Sbjct: 765 VKGYKLLNLATHQYLISRDVVFHESVFPFQSTTSHVSDFPNVDTSHDFCSQ-QNTSMLFN 824

BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9IDW7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51949 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 102/183 (55.74%), Postives = 121/183 (66.12%), Query Frame = 0

Query: 2   FFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLIN 61
           FF+  G THQ SC  T QQNSVVE KHQH+LNVAR+L FQ N+P+ FWG CI TA YLIN
Sbjct: 365 FFSSKGITHQHSCVETPQQNSVVERKHQHILNVARSLCFQSNLPIQFWGNCIQTAVYLIN 424

Query: 62  RTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPSD 121
           R P  +LSN +PY  L +K+  Y  +K FGCL YAST   +R+KFDPRA PCVF+GYP D
Sbjct: 425 RLPCPILSNKSPYEALLHKLPTYSHLKVFGCLCYASTLTAHRTKFDPRAIPCVFLGYPPD 484

Query: 122 IKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKE-----DNKPISHDFIDHFVIPSPLFD 180
           +KGYKL ++    + ISRDV+F E  FPFQS         N   SHDF       S LF+
Sbjct: 485 VKGYKLLNLATHQYLISRDVVFHESVFPFQSTTSHASDFPNVDTSHDFCSQ-QNTSMLFN 544

BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9GBA0 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24383 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 113/242 (46.69%), Postives = 143/242 (59.09%), Query Frame = 0

Query: 2   FFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLIN 61
           FF+  G THQ SC  T QQNSVVE KHQH+LNVAR+L FQ N+P+ FWG CI TA YLIN
Sbjct: 646 FFSSKGITHQHSCVETPQQNSVVERKHQHILNVARSLCFQSNLPIQFWGNCIQTAVYLIN 705

Query: 62  RTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPSD 121
           R P  +LSN +PY  L +K+  Y  +K FGCL YAST   +R+KFDPRA PCVF+GYP D
Sbjct: 706 RLPCPILSNKSPYEALLHKLPTYSHLKVFGCLCYASTLTAHRTKFDPRAIPCVFLGYPPD 765

Query: 122 IKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKE-----DNKPISHDFIDHFVIPSPLFD 181
           +KGYKL ++    + ISRDV+F E  FPFQS         N   SHDF       S LF+
Sbjct: 766 VKGYKLLNLATHQYLISRDVVFHESVFPFQSTTSHVSDFPNVDTSHDFYSQ-KNTSMLFN 825

Query: 182 HFEN-KGITENLVVNTLERLCEDNHGIDDSQPHIETSEETNPTTQTTIPIAPRRSSRAHY 238
            FE     + ++  + +  +   +    DS   + +S  T      + PI  RRS+R   
Sbjct: 826 SFEEPPSSSPHIPSSPIPVIPSSSSTSSDSCSSLCSSPTTPIHISESSPIPLRRSTRPSK 885

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
P109785.2e-2430.49Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q94HW25.4e-2131.21Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.9e-1832.24Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041464.9e-1431.46Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
KAA0037194.11.5e-5286.67Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAG7571875.12.9e-4844.12Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis suecica][more]
AAC33963.11.6e-4645.00contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Ara... [more]
XP_022154919.12.7e-4648.40uncharacterized protein LOC111022065 [Momordica charantia][more]
CAA7015607.13.6e-4645.65unnamed protein product [Microthlaspi erraticum][more]
Match NameE-valueIdentityDescription
A0A5A7T1407.2e-5386.67Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A2N9GUM11.4e-4849.06Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
A0A2N9G3P03.1e-4855.74Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
A0A2N9IDW73.1e-4855.74Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
A0A2N9GBA01.2e-4746.69Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..84
e-value: 1.3E-13
score: 53.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..239
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 4..148
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000195Bhi02M000195mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding