Bhi02G000195 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAATTTTTTGCCAAAACAGGAACTACTCATCAGTTCTCCTGTGCATATACTCTTCAACAGAATTCAGTGGTTGAAAGCAAACATCAACACCTCCTCAACGTTGCAAGAGCCCTAATGTTTCAGTTCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCTCACTGCAGCATACTTAATCAACAGAACACCTATGGTTTTACTATCCAACAGCACTCCCTATGTTGTTCTGTTTAACAAAATTGTTGACTATGGCTTCATAAAGACATTTGGATGCCTTGCCTATGCTTCTACACCAATAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGATATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAGTCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCACTTTGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAGGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCCTACCACCCAAACAACCATTCCCATAGCCCCAAGAAGGTCATCGAGAGCACATTACCCACCTCCTACCTAA AGAATTTTTTGCCAAAACAGGAACTACTCATCAGTTCTCCTGTGCATATACTCTTCAACAGAATTCAGTGGTTGAAAGCAAACATCAACACCTCCTCAACGTTGCAAGAGCCCTAATGTTTCAGTTCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCTCACTGCAGCATACTTAATCAACAGAACACCTATGGTTTTACTATCCAACAGCACTCCCTATGTTGTTCTGTTTAACAAAATTGTTGACTATGGCTTCATAAAGACATTTGGATGCCTTGCCTATGCTTCTACACCAATAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGATATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAGTCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCACTTTGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAGGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCCTACCACCCAAACAACCATTCCCATAGCCCCAAGAAGGTCATCGAGAGCACATTACCCACCTCCTACCTAA AGAATTTTTTGCCAAAACAGGAACTACTCATCAGTTCTCCTGTGCATATACTCTTCAACAGAATTCAGTGGTTGAAAGCAAACATCAACACCTCCTCAACGTTGCAAGAGCCCTAATGTTTCAGTTCAATGTTCCTCTCACTTTTTGGGGAGAATGCATCCTCACTGCAGCATACTTAATCAACAGAACACCTATGGTTTTACTATCCAACAGCACTCCCTATGTTGTTCTGTTTAACAAAATTGTTGACTATGGCTTCATAAAGACATTTGGATGCCTTGCCTATGCTTCTACACCAATAGTCAACAGGTCTAAATTCGATCCAAGAGCAAGACCATGTGTCTTCATGGGATATCCATCAGATATAAAGGGCTATAAGCTATATGATATGACTAAAATGACATTTTTTATCTCCAGGGATGTCTTATTCTTTGAAGAAAGGTTCCCATTCCAGTCTGTCAAAGAAGACAACAAGCCCATTTCACATGATTTTATTGATCACTTTGTCATACCAAGCCCACTATTTGATCACTTTGAAAACAAAGGTATTACTGAAAATCTTGTTGTTAATACCTTAGAACGCTTATGTGAGGATAACCACGGTATTGATGATTCACAACCTCATATTGAAACCTCAGAAGAAACCAATCCTACCACCCAAACAACCATTCCCATAGCCCCAAGAAGGTCATCGAGAGCACATTACCCACCTCCTACCTAA EFFAKTGTTHQFSCAYTLQQNSVVESKHQHLLNVARALMFQFNVPLTFWGECILTAAYLINRTPMVLLSNSTPYVVLFNKIVDYGFIKTFGCLAYASTPIVNRSKFDPRARPCVFMGYPSDIKGYKLYDMTKMTFFISRDVLFFEERFPFQSVKEDNKPISHDFIDHFVIPSPLFDHFENKGITENLVVNTLERLCEDNHGIDDSQPHIETSEETNPTTQTTIPIAPRRSSRAHYPPPT Homology
BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.2e-24 Identity = 75/246 (30.49%), Postives = 122/246 (49.59%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 5.4e-21 Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18 Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 79.7 bits (195), Expect = 4.9e-14 Identity = 56/178 (31.46%), Postives = 86/178 (48.31%), Query Frame = 0
BLAST of Bhi02G000195 vs. NCBI nr
Match: KAA0037194.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK13878.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 217.2 bits (552), Expect = 1.5e-52 Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of Bhi02G000195 vs. NCBI nr
Match: KAG7571875.1 (Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis suecica]) HSP 1 Score: 203.0 bits (515), Expect = 2.9e-48 Identity = 105/238 (44.12%), Postives = 151/238 (63.45%), Query Frame = 0
BLAST of Bhi02G000195 vs. NCBI nr
Match: AAC33963.1 (contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis thaliana]) HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46 Identity = 108/240 (45.00%), Postives = 154/240 (64.17%), Query Frame = 0
BLAST of Bhi02G000195 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia]) HSP 1 Score: 196.4 bits (498), Expect = 2.7e-46 Identity = 106/219 (48.40%), Postives = 130/219 (59.36%), Query Frame = 0
BLAST of Bhi02G000195 vs. NCBI nr
Match: CAA7015607.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 196.1 bits (497), Expect = 3.6e-46 Identity = 105/230 (45.65%), Postives = 142/230 (61.74%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A5A7T140 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00650 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 7.2e-53 Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9GUM1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33958 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48 Identity = 104/212 (49.06%), Postives = 135/212 (63.68%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9G3P0 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21852 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48 Identity = 102/183 (55.74%), Postives = 121/183 (66.12%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9IDW7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51949 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48 Identity = 102/183 (55.74%), Postives = 121/183 (66.12%), Query Frame = 0
BLAST of Bhi02G000195 vs. ExPASy TrEMBL
Match: A0A2N9GBA0 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24383 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47 Identity = 113/242 (46.69%), Postives = 143/242 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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