Bhi02G000123 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G000123
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Glycosyl hydrolase family protein
Location	chr2: 3152167 .. 3152414 (+)
RNA-Seq Expression	Bhi02G000123
Synteny	Bhi02G000123

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACTACCATCCTCAATGCTATGAAGAATATGGTCGATCCTGCGACAAAGGTCATGTACAATGAGAATGCGGATGCGGGATTTGTCAAGTCGAACGGGTTCTCATATGCCATTGTCGTTTTGGGGGAGCCTCCTTATATTGAAATGTTTGGTGACGGCATGAATCTCTCCATTCCTGAACGTAGTCCAAGCACCATAAGAAATGTGTGCAGCAATATCAAATGTGTCATTATCATCATCTTTCGGTGA

mRNA sequence

GTACTACCATCCTCAATGCTATGAAGAATATGGTCGATCCTGCGACAAAGGTCATGTACAATGAGAATGCGGATGCGGGATTTGTCAAGTCGAACGGGTTCTCATATGCCATTGTCGTTTTGGGGGAGCCTCCTTATATTGAAATGTTTGGTGACGGCATGAATCTCTCCATTCCTGAACGTAGTCCAAGCACCATAAGAAATGTGTGCAGCAATATCAAATGTGTCATTATCATCATCTTTCGGTGA

Coding sequence (CDS)

GTACTACCATCCTCAATGCTATGAAGAATATGGTCGATCCTGCGACAAAGGTCATGTACAATGAGAATGCGGATGCGGGATTTGTCAAGTCGAACGGGTTCTCATATGCCATTGTCGTTTTGGGGGAGCCTCCTTATATTGAAATGTTTGGTGACGGCATGAATCTCTCCATTCCTGAACGTAGTCCAAGCACCATAAGAAATGTGTGCAGCAATATCAAATGTGTCATTATCATCATCTTTCGGTGA

Protein sequence

TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPERSPSTIRNVCSNIKCVIIIIFR

Homology

[Close]

BLAST of Bhi02G000123 vs. TAIR 10
Match: AT5G20950.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 103.2 bits (256), Expect = 9.9e-23
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTIL A+KN V P T+V+Y++N DA FVKS  F YAIVV+GEPPY EMFGD  NL+I + 
Sbjct: 465 TTILAAVKNTVAPTTQVVYSQNPDANFVKSGKFDYAIVVVGEPPYAEMFGDTTNLTISDP 524

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PS I NVC ++KCV++++
Sbjct: 525 GPSIIGNVCGSVKCVVVVV 543

[Close]

BLAST of Bhi02G000123 vs. TAIR 10
Match: AT5G20950.2 (Glycosyl hydrolase family protein )

HSP 1 Score: 103.2 bits (256), Expect = 9.9e-23
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTIL A+KN V P T+V+Y++N DA FVKS  F YAIVV+GEPPY EMFGD  NL+I + 
Sbjct: 465 TTILAAVKNTVAPTTQVVYSQNPDANFVKSGKFDYAIVVVGEPPYAEMFGDTTNLTISDP 524

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PS I NVC ++KCV++++
Sbjct: 525 GPSIIGNVCGSVKCVVVVV 543

[Close]

BLAST of Bhi02G000123 vs. TAIR 10
Match: AT5G20940.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 100.1 bits (248), Expect = 8.4e-22
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTIL A+K  VDP T+V+YN+N D  FVK+  F YAIV +GE PY E FGD  NL+I E 
Sbjct: 471 TTILAAVKKTVDPKTQVIYNQNPDTNFVKAGDFDYAIVAVGEKPYAEGFGDSTNLTISEP 530

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI NVC+++KCV++++
Sbjct: 531 GPSTIGNVCASVKCVVVVV 549

[Close]

BLAST of Bhi02G000123 vs. TAIR 10
Match: AT5G04885.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 87.0 bits (214), Expect = 7.4e-18
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TT+L+A+K+ VD +T+V++ EN DA F+KSN F+YAI+ +GEPPY E  GD   L++ + 
Sbjct: 469 TTLLSAVKSAVDQSTEVVFRENPDAEFIKSNNFAYAIIAVGEPPYAETAGDSDKLTMLDP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            P+ I + C  +KCV+++I
Sbjct: 529 GPAIISSTCQAVKCVVVVI 547

[Close]

BLAST of Bhi02G000123 vs. TAIR 10
Match: AT3G62710.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 3.0e-11
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNG-FSYAIVVLGEPPYIEMFGDGMNLSIPE 60
           TTIL A++  VDP T+V+Y E  +    K +   +Y IVV+GE PY E FGD   L I +
Sbjct: 494 TTILEAIQKAVDPTTEVVYVEEPNQDTAKLHADAAYTIVVVGETPYAETFGDSPTLGITK 553

Query: 61  RSPSTIRNVC-SNIKCVIIII 80
             P T+ + C S +KC++I++
Sbjct: 554 PGPDTLSHTCGSGMKCLVILV 574

[Close]

BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_038879149.1 (beta-glucosidase BoGH3B-like [Benincasa hispida] >XP_038879150.1 beta-glucosidase BoGH3B-like [Benincasa hispida])

HSP 1 Score: 133.7 bits (335), Expect = 7.4e-28
Identity = 61/79 (77.22%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDPAT+V+YNEN DAGFVKSNGFSYAIV++GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPATQVVYNENPDAGFVKSNGFSYAIVIVGEPPYAEMFGDSTNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTIRNVC+NIKCV++++
Sbjct: 529 GPSTIRNVCNNIKCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_022988494.1 (uncharacterized protein LOC111485719 [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-26
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDPAT+V+YNEN DA FVKSN FSYAIVV+GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPATEVVYNENPDASFVKSNKFSYAIVVVGEPPYAEMFGDSSNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_008453517.1 (PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo] >XP_008453518.1 PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo] >KAA0058158.1 beta-glucosidase BoGH3B-like [Cucumis melo var. makuwa] >TYK28516.1 beta-glucosidase BoGH3B-like [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 9.0e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DAGFVKSN FSYAIVV+GEPPY E+ GD MNLSI E 
Sbjct: 469 TTILNAVKNTVDPVTQVVYNENPDAGFVKSNEFSYAIVVVGEPPYAEISGDSMNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_023515716.1 (uncharacterized protein LOC111779796 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDPAT+V+YNEN DA +VKSN FSYAIVV+GEPPY EMFGD  NLSI E 
Sbjct: 470 TTILNAVKNTVDPATEVVYNENPDASYVKSNKFSYAIVVVGEPPYAEMFGDSSNLSISEP 529

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PS I+NVCSN+KCV+I++
Sbjct: 530 GPSAIKNVCSNVKCVVIVV 548

[Close]

BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_022135118.1 (uncharacterized protein LOC111007174 [Momordica charantia] >XP_022135119.1 uncharacterized protein LOC111007174 [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DA FVKSN FSYAIV++GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPTTQVVYNENPDASFVKSNQFSYAIVIVGEPPYAEMFGDSTNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTIRNVCSN+ CV++++
Sbjct: 529 GPSTIRNVCSNVNCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. ExPASy TrEMBL
Match: A0A6J1JLR8 (uncharacterized protein LOC111485719 OS=Cucurbita maxima OX=3661 GN=LOC111485719 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-26
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDPAT+V+YNEN DA FVKSN FSYAIVV+GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPATEVVYNENPDASFVKSNKFSYAIVVVGEPPYAEMFGDSSNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. ExPASy TrEMBL
Match: A0A1S3BXL6 (beta-glucosidase BoGH3B-like OS=Cucumis melo OX=3656 GN=LOC103494201 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.4e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DAGFVKSN FSYAIVV+GEPPY E+ GD MNLSI E 
Sbjct: 469 TTILNAVKNTVDPVTQVVYNENPDAGFVKSNEFSYAIVVVGEPPYAEISGDSMNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. ExPASy TrEMBL
Match: A0A5D3DXL9 (Beta-glucosidase BoGH3B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001580 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.4e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DAGFVKSN FSYAIVV+GEPPY E+ GD MNLSI E 
Sbjct: 469 TTILNAVKNTVDPVTQVVYNENPDAGFVKSNEFSYAIVVVGEPPYAEISGDSMNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. ExPASy TrEMBL
Match: A0A6J1C0J8 (uncharacterized protein LOC111007174 OS=Momordica charantia OX=3673 GN=LOC111007174 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.7e-26
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DA FVKSN FSYAIV++GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPTTQVVYNENPDASFVKSNQFSYAIVIVGEPPYAEMFGDSTNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTIRNVCSN+ CV++++
Sbjct: 529 GPSTIRNVCSNVNCVVVVV 547

[Close]

BLAST of Bhi02G000123 vs. ExPASy TrEMBL
Match: A0A6A6NCT2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_012601 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TT+LNA+KN VDPATKV+YN N DA FVKSN FSYAIVV+GEPPY E FGD +NL+IPE 
Sbjct: 398 TTVLNAIKNTVDPATKVVYNRNPDANFVKSNKFSYAIVVVGEPPYAETFGDSLNLTIPEP 457

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI NVC+++KCV+III
Sbjct: 458 GPSTITNVCTSVKCVVIII 476

The following BLAST results are available for this feature:

BLAST of Bhi02G000123 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20950.1	9.9e-23	59.49	Glycosyl hydrolase family protein	[more]
AT5G20950.2	9.9e-23	59.49	Glycosyl hydrolase family protein	[more]
AT5G20940.1	8.4e-22	56.96	Glycosyl hydrolase family protein	[more]
AT5G04885.1	7.4e-18	46.84	Glycosyl hydrolase family protein	[more]
AT3G62710.1	3.0e-11	41.98	Glycosyl hydrolase family protein	[more]

BLAST of Bhi02G000123 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi02G000123 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879149.1	7.4e-28	77.22	beta-glucosidase BoGH3B-like [Benincasa hispida] >XP_038879150.1 beta-glucosidas...	[more]
XP_022988494.1	3.1e-26	74.68	uncharacterized protein LOC111485719 [Cucurbita maxima]	[more]
XP_008453517.1	9.0e-26	73.42	PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo] >XP_008453518.1 PREDICTED...	[more]
XP_023515716.1	2.0e-25	73.42	uncharacterized protein LOC111779796 [Cucurbita pepo subsp. pepo]	[more]
XP_022135118.1	2.0e-25	72.15	uncharacterized protein LOC111007174 [Momordica charantia] >XP_022135119.1 uncha...	[more]

BLAST of Bhi02G000123 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLR8	1.5e-26	74.68	uncharacterized protein LOC111485719 OS=Cucurbita maxima OX=3661 GN=LOC111485719...	[more]
A0A1S3BXL6	4.4e-26	73.42	beta-glucosidase BoGH3B-like OS=Cucumis melo OX=3656 GN=LOC103494201 PE=3 SV=1	[more]
A0A5D3DXL9	4.4e-26	73.42	Beta-glucosidase BoGH3B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1C0J8	9.7e-26	72.15	uncharacterized protein LOC111007174 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6A6NCT2	1.3e-25	73.42	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_012601 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily	GENE3D	3.40.50.1700		coord: 1..81 e-value: 7.4E-12 score: 47.5
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily	SUPERFAMILY	52279	Beta-D-glucan exohydrolase, C-terminal domain	coord: 1..79
None	No IPR available	PANTHER	PTHR30620:SF101	SUBFAMILY NOT NAMED	coord: 1..79
None	No IPR available	PANTHER	PTHR30620	PERIPLASMIC BETA-GLUCOSIDASE-RELATED	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M000123	Bhi02M000123	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009251	glucan catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008422	beta-glucosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds