Bhi01G001571 (gene) Wax gourd (B227) v1

Overview
NameBhi01G001571
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCell wall protein DAN4-like
Locationchr1: 46576686 .. 46577309 (+)
RNA-Seq ExpressionBhi01G001571
SyntenyBhi01G001571
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTACCACTTTATATATAATCTTTCAATCTCCCTATTCTTCTTCATCGATCCCTTCTTTCTATCTTCTTTTCTTCAATCTCATCCTATTTTCATTTTCATAATGGCTTATCAATCACTTGCTCTTCTTGCTGTCATCATTGTGGCCATTGTTGGTGCTTTCGCTCAGGCTCCATCTACCTCTTCCACGACCTCTCCAGCTCCGATGACCTCTTCGTTTGATTCCACCTCATCCCCAATGACCTCTTTTGAGACTTCATCTCCGACGAGCTCACAAGATTCCTCTACCTCGCCAGACCTCTCCACCTATGCTCCATCAATCTCTGTGGCTCCTGCATTCTCGTCGGATTCTACCAGCTCCAATAGTGCTCAATCACCAACGCCGGAGATAGCTCCGACCGGTTCTCCCTCTGTTGAGACTTCGCGCTTGTTTACAAATGATTTTTTTGGCTGATAGATTATGGAGCAGAGATTCGAATCTCAACTTTTGGTAGAAACTACTAATATTTCAATCATTTGAGCTATGCTCCTCGAAAAAAATTCGAGTAATTTTAATTTTCTCTTTCATTTTGTTATTATTCCAATGTAATCAAATAAATATGAATGAAAATTATTTTGTTATAA

mRNA sequence

CTTTTACCACTTTATATATAATCTTTCAATCTCCCTATTCTTCTTCATCGATCCCTTCTTTCTATCTTCTTTTCTTCAATCTCATCCTATTTTCATTTTCATAATGGCTTATCAATCACTTGCTCTTCTTGCTGTCATCATTGTGGCCATTGTTGGTGCTTTCGCTCAGGCTCCATCTACCTCTTCCACGACCTCTCCAGCTCCGATGACCTCTTCGTTTGATTCCACCTCATCCCCAATGACCTCTTTTGAGACTTCATCTCCGACGAGCTCACAAGATTCCTCTACCTCGCCAGACCTCTCCACCTATGCTCCATCAATCTCTGTGGCTCCTGCATTCTCGTCGGATTCTACCAGCTCCAATAGTGCTCAATCACCAACGCCGGAGATAGCTCCGACCGGTTCTCCCTCTGTTGAGACTTCGCGCTTGTTTACAAATGATTTTTTTGGCTGATAGATTATGGAGCAGAGATTCGAATCTCAACTTTTGGTAGAAACTACTAATATTTCAATCATTTGAGCTATGCTCCTCGAAAAAAATTCGAGTAATTTTAATTTTCTCTTTCATTTTGTTATTATTCCAATGTAATCAAATAAATATGAATGAAAATTATTTTGTTATAA

Coding sequence (CDS)

TTTTACCACTTTATATATAATCTTTCAATCTCCCTATTCTTCTTCATCGATCCCTTCTTTCTATCTTCTTTTCTTCAATCTCATCCTATTTTCATTTTCATAATGGCTTATCAATCACTTGCTCTTCTTGCTGTCATCATTGTGGCCATTGTTGGTGCTTTCGCTCAGGCTCCATCTACCTCTTCCACGACCTCTCCAGCTCCGATGACCTCTTCGTTTGATTCCACCTCATCCCCAATGACCTCTTTTGAGACTTCATCTCCGACGAGCTCACAAGATTCCTCTACCTCGCCAGACCTCTCCACCTATGCTCCATCAATCTCTGTGGCTCCTGCATTCTCGTCGGATTCTACCAGCTCCAATAGTGCTCAATCACCAACGCCGGAGATAGCTCCGACCGGTTCTCCCTCTGTTGAGACTTCGCGCTTGTTTACAAATGATTTTTTTGGCTGA

Protein sequence

FYHFIYNLSISLFFFIDPFFLSSFLQSHPIFIFIMAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDSSTSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG
Homology
BLAST of Bhi01G001571 vs. NCBI nr
Match: XP_038887448.1 (putative protein TPRXL [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 3.8e-46
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS
Sbjct: 1   MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 60

Query: 95  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG
Sbjct: 61  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 116

BLAST of Bhi01G001571 vs. NCBI nr
Match: XP_038887469.1 (classical arabinogalactan protein 6-like [Benincasa hispida])

HSP 1 Score: 166.4 bits (420), Expect = 1.9e-37
Identity = 103/116 (88.79%), Postives = 104/116 (89.66%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLALL VIIVAIVGAFAQAPSTS TTS APMTSSFDSTSS  TSFETSSP SSQDS
Sbjct: 1   MAYQSLALLVVIIVAIVGAFAQAPSTSPTTSSAPMTSSFDSTSSLQTSFETSSPMSSQDS 60

Query: 95  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           S SPDLSTYAPSISVAPAFS DSTSSNSAQSPTPE APTGSP+  TSRLFTN FFG
Sbjct: 61  SISPDLSTYAPSISVAPAFSPDSTSSNSAQSPTPEAAPTGSPTAGTSRLFTNGFFG 116

BLAST of Bhi01G001571 vs. NCBI nr
Match: KAA0056285.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-16
Identity = 70/116 (60.34%), Postives = 84/116 (72.41%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLALLA+I+VA+ GA AQAPSTS T+SP  MTSS DS++S  +S ++++ T++  S
Sbjct: 1   MAYQSLALLALIVVAVTGAVAQAPSTSPTSSPTTMTSSVDSSTSSSSSLDSTTTTTTTTS 60

Query: 95  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           S        A SISVAPAFS DS    SAQSPT   +PTGSPS ETSR FTN FFG
Sbjct: 61  SAD------ASSISVAPAFSPDS----SAQSPTTATSPTGSPSGETSRFFTNGFFG 106

BLAST of Bhi01G001571 vs. NCBI nr
Match: KAA0056279.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-14
Identity = 69/116 (59.48%), Postives = 81/116 (69.83%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLA LA+IIVA+ GA AQAP+TS T++PA MTSS  S+SS  ++   ++  SS D+
Sbjct: 1   MAYQSLAFLALIIVAVTGAVAQAPATSPTSTPATMTSSASSSSSLDSTTIPTTTISSADA 60

Query: 95  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           S          SISVAPAFS DS    SAQSPT   +PTGSPS ETSRLFTN FFG
Sbjct: 61  S----------SISVAPAFSPDS----SAQSPTTATSPTGSPSAETSRLFTNGFFG 102

BLAST of Bhi01G001571 vs. NCBI nr
Match: XP_008450206.1 (PREDICTED: cell wall protein DAN4-like [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-14
Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFE-TSSPTSSQD 94
           MAYQSLA L +IIVAI G  AQAPSTS T++PA MTSSFDS++S  +S + T++PT++  
Sbjct: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60

Query: 95  SSTSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDF 149
           SST         SIS+APAFS DS    SAQSPT   +PTGS S ETSRLF+N F
Sbjct: 61  SSTDDS------SISIAPAFSPDS----SAQSPTTATSPTGSTSAETSRLFSNGF 105

BLAST of Bhi01G001571 vs. ExPASy TrEMBL
Match: A0A5D3C1H7 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00200 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.9e-17
Identity = 70/116 (60.34%), Postives = 84/116 (72.41%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLALLA+I+VA+ GA AQAPSTS T+SP  MTSS DS++S  +S ++++ T++  S
Sbjct: 1   MAYQSLALLALIVVAVTGAVAQAPSTSPTSSPTTMTSSVDSSTSSSSSLDSTTTTTTTTS 60

Query: 95  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           S        A SISVAPAFS DS    SAQSPT   +PTGSPS ETSR FTN FFG
Sbjct: 61  SAD------ASSISVAPAFSPDS----SAQSPTTATSPTGSPSGETSRFFTNGFFG 106

BLAST of Bhi01G001571 vs. ExPASy TrEMBL
Match: A0A5D3C1I1 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00260 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 69/116 (59.48%), Postives = 81/116 (69.83%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLA LA+IIVA+ GA AQAP+TS T++PA MTSS  S+SS  ++   ++  SS D+
Sbjct: 1   MAYQSLAFLALIIVAVTGAVAQAPATSPTSTPATMTSSASSSSSLDSTTIPTTTISSADA 60

Query: 95  STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           S          SISVAPAFS DS    SAQSPT   +PTGSPS ETSRLFTN FFG
Sbjct: 61  S----------SISVAPAFSPDS----SAQSPTTATSPTGSPSAETSRLFTNGFFG 102

BLAST of Bhi01G001571 vs. ExPASy TrEMBL
Match: A0A1S3BPQ2 (cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-14
Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFE-TSSPTSSQD 94
           MAYQSLA L +IIVAI G  AQAPSTS T++PA MTSSFDS++S  +S + T++PT++  
Sbjct: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60

Query: 95  SSTSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDF 149
           SST         SIS+APAFS DS    SAQSPT   +PTGS S ETSRLF+N F
Sbjct: 61  SSTDDS------SISIAPAFSPDS----SAQSPTTATSPTGSTSAETSRLFSNGF 105

BLAST of Bhi01G001571 vs. ExPASy TrEMBL
Match: A0A0A0L8Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592670 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12
Identity = 70/121 (57.85%), Postives = 83/121 (68.60%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFDSTSSPMTSFETSSPTSSQDS 94
           MAYQSLA LA+IIVAI GA AQ P++S   +PAP TS   ST +PMTS  +SS +SS DS
Sbjct: 1   MAYQSLAFLALIIVAITGAVAQGPTSS---TPAPTTS---STPAPMTS--SSSSSSSLDS 60

Query: 95  -----STSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFF 151
                +TS   S  +PSIS AP  S DS    SAQSPT   +P+GSPS+ETSRLF+N FF
Sbjct: 61  TTTTTTTSSGSSIDSPSISAAPGLSPDS----SAQSPTTATSPSGSPSIETSRLFSNGFF 109

BLAST of Bhi01G001571 vs. ExPASy TrEMBL
Match: A0A0A0LB81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 5.6e-11
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 0

Query: 35  MAYQSLALLAVIIVAIVGAFAQAPSTSSTTSPAPMTSSFD-STSSPMTSFETSSPTSSQD 94
           MAYQSLA LA+IIVA+ G  AQ P++S   +PAP TSSFD ST S  +S ++++ T++  
Sbjct: 1   MAYQSLAFLALIIVAVTGVVAQGPTSS---TPAPTTSSFDSSTPSSSSSLDSTTTTTTTT 60

Query: 95  SSTSPDLSTYAPSISVAPAFSSDSTSSNSAQSPTPEIAPTGSPSVETSRLFTNDFFG 151
           +S+S   S  +PSISVAP  + DS     AQSPT   +PTGS S ETSR FTN FFG
Sbjct: 61  TSSSSGSSADSPSISVAPGLAPDS----YAQSPTTAASPTGS-SAETSRFFTNGFFG 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038887448.13.8e-46100.00putative protein TPRXL [Benincasa hispida][more]
XP_038887469.11.9e-3788.79classical arabinogalactan protein 6-like [Benincasa hispida][more]
KAA0056285.11.4e-1660.34cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall pro... [more]
KAA0056279.11.3e-1459.48cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall pro... [more]
XP_008450206.12.3e-1459.13PREDICTED: cell wall protein DAN4-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A5D3C1H76.9e-1760.34Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3C1I16.4e-1559.48Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3BPQ21.1e-1459.13cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1[more]
A0A0A0L8Q52.3e-1257.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592670 PE=4 SV=1[more]
A0A0A0LB815.6e-1153.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001571Bhi01M001571mRNA