MELO3C025809 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAAACTTTGAATGGAGGGCTATTGATTTTCTAGAATTCATAGTTGACAATGAACTAAAAATTTGGGGCTTTTGGCATTGCAAAGCCCAAACTCAGGCCACGAACAATACGGAATTGCCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACCCCACGAATTCTGCAGTCCACGGCCAAGGAAAACGATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGGTGAGCTTTAAAGGATGTATGAACAAGTCCAACTGTTTATTTTCCTATGTTTGATGAATCCAACATTCAAACTTTATTCAGTTTTCAGACTTAATTGTTCTGATGCAGAAGAAGATTTGTTTTGCAATTGTTGTTTTATTACGGTGCTTTCCTAATGACGTTTTCGATCAAGATTCATCGTGATTTATTCTGGTTTCGTTTCTGGCAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGGTTTGTATTATGTCAATTTTCGTCAGTTTATAGATTTAAAGGTTAAAAATTTGTATCATACTGTTTAAACTGTAAATTGGAAATCAATCTTGATGCTTGTGAAAACTTTTGATAATTTGATTTGATTAAAAAACTGAACTTTTACCGTCTGATTCTAGTAATCATGTATACCTATGTAGGTAAGGTTGTGTGTATGTGTGTGATGTTCTCTGAGTGAGCTAAACGGACTAGGCTAATAGATGAAGAAGACGACCAATCTAAGAGCCGAAGGAATGAAGCTTAAACTCTGTTGTTACACAAGTATTAGATCCCATGGATACAATGCCACATCCTTATCCCGTGCAAAATTCACATTTCAATCAAGATATCATTTTTGTCGGGAGTGTGACCAAAGTGCCACATTGCATAGATAAGGGAAAATTATGTGTATATTTGTAAGAACAACTATGTTCAATAGTATGATAACTTTGGGTGAGATATAAAACAAAGTTGCGAGAGTTTATGCCCTAAGTGGGCAATATCATACTATTGCAAAATATGTGGAGGCGTTGGAGGGTTGTTGTCCTCACAATTATCATGTGGATAATCACTGAAACTTTGTTGAAGATTTTGTAAGGATTTTGGGGGCCTTATTAGGTTCTCTGTTAGTTTCTCTCGTTTCTCGTTGACTTACAATTTACTCGAATAGAACCCCTTCTTGTAGTTGGCTCTCTTTTTTATGGGCTTCTTGTTTAACCGTGTTTTTTCTTCCATTTTTCTCAATGTTCGGCTTTTCATCCAAAAAATGAACAAATAAACAAAAATTATTAATTATGAGAACTTGAAGAAATTTTCAATGGATAATCGATGACTGATTAATGACTATTTGGGGGGGGGGGGTGCTATATCCCTGTTATGCCGTGAATTTTTTCTGCACATGACTTGTGGTATTTATAAAATCTGGAATAAACATATAGAATCACCGGTCTTAGAATGTGCAGTTTTGTAAATTTTATACAGCAGCTCATCCATGAAAGTTCAACTTTTTGGAATTTGGTTTTCTACATTTGCAAGTTTATGGAAAACGTTCATTCACATATTTCATACATTTGACAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGGTATTCATCTGACTTGTGGAATAACCTCTTTTCCATCTGCCAATTCATTTGAAATTAATGACACTTCTCTATGCTAATTGTTTATATTCTTTGAAGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATGTGAGTTGATATTGACTCATTTCTTCTCTTTATGTTCAAGTTGCGTTTGTACACTGTTTATATTAACTTTTAGAAGAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGAAGCAAGATATCTGTAAGAACTCTTAGATTATCATGAAACAAAATATAGCATAAGATCATATGAGTAACCTTAAATGTTTTTTTTTTTTTTATCACCCTTCCCCGAGGGTAATTATTCTCGACTTCATAGCAATTTTTTAATCTGTTTCTTTACTTAGGTATACATATATGGTTTTTCATATCCACATGCATCTAGAGTTTTATCATCTTGTGGATTATTCTTTTTTGTGTGTCTATTTGCAGAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAATTTGCAGCATGGTAATGCTGTTTTATTTTGTGCTGAGGCTGTAAATAGTATCTTGAACAGTTCATTCTAAGTACTGTGATTTTAAACTCACCCATTACGAACTATAGTGGTAGTAATCCTTCATATTATTGGCTGCTTTCCCCAATGAAAAACGAATCAGTCAAGTTCTAGAGTCATACTTGTCAAGGTCCAGAGTTTGTAAATTAACTGTTTATTTGATCGACGTCTTTAATTAATTGTTTTAAGGTTGAATATGTTAACACAAGGATGTATTGTTCCAAGATATGGAAGCTCAAATTCTTGATTACCCTACTCAGTTTCATATTTTTCTTTTTACAACGTAACAGTTGTTGAGACC ATTGAAACTTTGAATGGAGGGCTATTGATTTTCTAGAATTCATAGTTGACAATGAACTAAAAATTTGGGGCTTTTGGCATTGCAAAGCCCAAACTCAGGCCACGAACAATACGGAATTGCCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACCCCACGAATTCTGCAGTCCACGGCCAAGGAAAACGATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAATTTGCAGCATGGTAATGCTGTTTTATTTTGTGCTGAGGCTGTAAATAGTATCTTGAACAGTTCATTCTAAGTACTGTGATTTTAAACTCACCCATTACGAACTATAGTGGTAGTAATCCTTCATATTATTGGCTGCTTTCCCCAATGAAAAACGAATCAGTCAAGTTCTAGAGTCATACTTGTCAAGGTCCAGAGTTTGTAAATTAACTGTTTATTTGATCGACGTCTTTAATTAATTGTTTTAAGGTTGAATATGTTAACACAAGGATGTATTGTTCCAAGATATGGAAGCTCAAATTCTTGATTACCCTACTCAGTTTCATATTTTTCTTTTTACAACGTAACAGTTGTTGAGACC ATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG*
BLAST of MELO3C025809 vs. Swiss-Prot
Match: ATG12_MEDTR (Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=ATG12 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-37 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 1
BLAST of MELO3C025809 vs. Swiss-Prot
Match: AT12A_ARATH (Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana GN=ATG12A PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 2.3e-36 Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of MELO3C025809 vs. Swiss-Prot
Match: AT12B_ARATH (Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana GN=ATG12B PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.8e-34 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 1
BLAST of MELO3C025809 vs. Swiss-Prot
Match: ATG12_ORYSI (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica GN=ATG12 PE=3 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 7.2e-30 Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of MELO3C025809 vs. Swiss-Prot
Match: ATG12_ORYSJ (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica GN=ATG12 PE=3 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 7.2e-30 Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of MELO3C025809 vs. TrEMBL
Match: A0A0A0LIA6_CUCSA (Ubiquitin-like protein ATG12 OS=Cucumis sativus GN=Csa_3G846020 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-45 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of MELO3C025809 vs. TrEMBL
Match: A0A061GBK9_THECC (Ubiquitin-like protein ATG12 OS=Theobroma cacao GN=TCM_029125 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 2.1e-36 Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of MELO3C025809 vs. TrEMBL
Match: A0A061GCF0_THECC (Ubiquitin-like protein ATG12 (Fragment) OS=Theobroma cacao GN=TCM_029125 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 2.1e-36 Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of MELO3C025809 vs. TrEMBL
Match: G7L6T7_MEDTR (Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=MTR_8g020500 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.0e-35 Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 1
BLAST of MELO3C025809 vs. TrEMBL
Match: I3S9A1_LOTJA (Ubiquitin-like protein ATG12 OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.0e-35 Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of MELO3C025809 vs. TAIR10
Match: AT1G54210.1 (AT1G54210.1 Ubiquitin-like superfamily protein) HSP 1 Score: 152.5 bits (384), Expect = 1.3e-37 Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of MELO3C025809 vs. TAIR10
Match: AT3G13970.1 (AT3G13970.1 Ubiquitin-like superfamily protein) HSP 1 Score: 145.6 bits (366), Expect = 1.6e-35 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 1
BLAST of MELO3C025809 vs. NCBI nr
Match: gi|659128006|ref|XP_008464001.1| (PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]) HSP 1 Score: 191.8 bits (486), Expect = 5.5e-46 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of MELO3C025809 vs. NCBI nr
Match: gi|449466596|ref|XP_004151012.1| (PREDICTED: ubiquitin-like protein ATG12 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 1.6e-45 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of MELO3C025809 vs. NCBI nr
Match: gi|470135777|ref|XP_004303685.1| (PREDICTED: ubiquitin-like protein ATG12 [Fragaria vesca subsp. vesca]) HSP 1 Score: 162.5 bits (410), Expect = 3.6e-37 Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 1
BLAST of MELO3C025809 vs. NCBI nr
Match: gi|502156412|ref|XP_004510461.1| (PREDICTED: ubiquitin-like protein ATG12 [Cicer arietinum]) HSP 1 Score: 160.2 bits (404), Expect = 1.8e-36 Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 1
BLAST of MELO3C025809 vs. NCBI nr
Match: gi|590620730|ref|XP_007024614.1| (Ubiquitin-like superfamily protein isoform 2, partial [Theobroma cacao]) HSP 1 Score: 159.5 bits (402), Expect = 3.0e-36 Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|