MU49608 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU49608
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUbiquitin-like protein ATG12
Locationchr4 : 18331375 .. 18334638 (+)
Sequence length799
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ATTGAAACTTTGAATGGAGGGATTTTCTAGAATTCATAGTTGACAATGAACTAAAAATTTGGGGCTTTTGGCATTGCAAAGCCCAAACTCAGGCCACGAACAATACGGAATTGCCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACCCCACGAATTCTGCAGTCCACGGCCAAGGAAAACGATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAATTTGCAGCATGGTAATGCTGAGTGCTGAGGCTGTAAATAGTATCTTGAACAGTTCATTCTAAGTACTGTGATTTTAAACTCACCCATTACGAACTATAGTGGTAGTAATCCTTCATATTATTGGCTGCTTTCCCCAATGAAAAACGAATCAGTCAAGTTCTAGAGTCATACTTGTCAAGGTCCAGAGTTTGTAAATTAACTGTTTATTTGATCGACGTCTTTAATTAATTGTTTTAAGGTTGAATATGTTAACACAAGGATGTATTGTTCCAAGATATGGAAGCTCAAATTCTTGATTACCCTACTCAGTTTCATATTTTTCTTT
Homology
[Close]
BLAST of MU49608 vs. Swiss-Prot
Match: ATG12_MEDTR (Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=ATG12 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.5e-37
Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 1 

Query: 187 MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 246
           M + ES TS RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VN
Sbjct: 1   MAAAESPTSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRESLFVYVN 60

Query: 247 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 306
           SAFSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 61  SAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 95

Query: 307  366
           
Sbjct: 121  95

Query: 367  426
           
Sbjct: 181  95

Query: 427  472
           
Sbjct: 241  95

[Close]
BLAST of MU49608 vs. Swiss-Prot
Match: AT12A_ARATH (Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana GN=ATG12A PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.4e-36
Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 1 

Query: 190 TSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNS 249
           T + S +S RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNS
Sbjct: 3   TESSSPSSVRKVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVNS 62

Query: 250 AFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 309
           AFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 63  AFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96

Query: 310  369
           
Sbjct: 123  96

Query: 370  429
           
Sbjct: 183  96

Query: 430  472
           
Sbjct: 243  96

[Close]
BLAST of MU49608 vs. Swiss-Prot
Match: AT12B_ARATH (Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana GN=ATG12B PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.8e-34
Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           +TES  S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSA
Sbjct: 2   ATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSA 61

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62  FSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94

Query: 313  372
           
Sbjct: 122  94

Query: 373  432
           
Sbjct: 182  94

Query: 433  472
           
Sbjct: 242  94

[Close]
BLAST of MU49608 vs. Swiss-Prot
Match: ATG12_ORYSJ (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica GN=ATG12 PE=3 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 1 

Query: 217 RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDET 276
           +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE 
Sbjct: 9   KKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPNPDEL 68

Query: 277 VIDLYNNFGIDGKLVVNYACSMAWG 336
           +IDLYNNFGIDG+LVVNYA SMAWG
Sbjct: 69  IIDLYNNFGIDGQLVVNYASSMAWG 93

Query: 337  396
           
Sbjct: 129  93

Query: 397  456
           
Sbjct: 189  93

Query: 457  472
           
Sbjct: 249  93

[Close]
BLAST of MU49608 vs. Swiss-Prot
Match: ATG12_ORYSI (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica GN=ATG12 PE=3 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 1 

Query: 217 RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDET 276
           +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE 
Sbjct: 9   KKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPNPDEL 68

Query: 277 VIDLYNNFGIDGKLVVNYACSMAWG 336
           +IDLYNNFGIDG+LVVNYA SMAWG
Sbjct: 69  IIDLYNNFGIDGQLVVNYASSMAWG 93

Query: 337  396
           
Sbjct: 129  93

Query: 397  456
           
Sbjct: 189  93

Query: 457  472
           
Sbjct: 249  93

[Close]
BLAST of MU49608 vs. TrEMBL
Match: A0A0A0LIA6_CUCSA (Ubiquitin-like protein ATG12 OS=Cucumis sativus GN=Csa_3G846020 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-45
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 187 MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 246
           MTSTESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1   MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 247 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 306
           SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61  SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

Query: 307  366
           
Sbjct: 121  95

Query: 367  426
           
Sbjct: 181  95

Query: 427  472
           
Sbjct: 241  95

[Close]
BLAST of MU49608 vs. TrEMBL
Match: A0A061GBK9_THECC (Ubiquitin-like protein ATG12 OS=Theobroma cacao GN=TCM_029125 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.8e-36
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           + ES TS RKVVV LRATGDAPILKQ KFK+PGTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 2   AAESPTSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRDTLFVYVNSA 61

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62  FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 94

Query: 313  372
           
Sbjct: 122  94

Query: 373  432
           
Sbjct: 182  94

Query: 433  472
           
Sbjct: 242  94

[Close]
BLAST of MU49608 vs. TrEMBL
Match: A0A061GCF0_THECC (Ubiquitin-like protein ATG12 (Fragment) OS=Theobroma cacao GN=TCM_029125 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.8e-36
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           + ES TS RKVVV LRATGDAPILKQ KFK+PGTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 22  AAESPTSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRDTLFVYVNSA 81

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 82  FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 114

Query: 313  372
           
Sbjct: 142  114

Query: 373  432
           
Sbjct: 202  114

Query: 433  472
           
Sbjct: 262  114

[Close]
BLAST of MU49608 vs. TrEMBL
Match: I3S9A1_LOTJA (Ubiquitin-like protein ATG12 OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.4e-35
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           S ES +S RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 2   SVESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRDTLFVYVNSA 61

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE +IDLYNNFG DGKL+VNYACSMAWG
Sbjct: 62  FSPNPDELIIDLYNNFGFDGKLIVNYACSMAWG 94

Query: 313  372
           
Sbjct: 122  94

Query: 373  432
           
Sbjct: 182  94

Query: 433  472
           
Sbjct: 242  94

[Close]
BLAST of MU49608 vs. TrEMBL
Match: G7L6T7_MEDTR (Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=MTR_8g020500 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.4e-35
Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 1 

Query: 187 MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 246
           M + ES TS RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VN
Sbjct: 1   MAAAESPTSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRESLFVYVN 60

Query: 247 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 306
           SAFSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 61  SAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 95

Query: 307  366
           
Sbjct: 121  95

Query: 367  426
           
Sbjct: 181  95

Query: 427  472
           
Sbjct: 241  95

[Close]
BLAST of MU49608 vs. TAIR10
Match: AT1G54210.1 (AT1G54210.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 3.6e-37
Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 1 

Query: 190 TSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNS 249
           T + S +S RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNS
Sbjct: 3   TESSSPSSVRKVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVNS 62

Query: 250 AFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 309
           AFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 63  AFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96

Query: 310  369
           
Sbjct: 123  96

Query: 370  429
           
Sbjct: 183  96

Query: 430  472
           
Sbjct: 243  96

[Close]
BLAST of MU49608 vs. TAIR10
Match: AT3G13970.1 (AT3G13970.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 4.4e-35
Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           +TES  S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSA
Sbjct: 2   ATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSA 61

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62  FSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94

Query: 313  372
           
Sbjct: 122  94

Query: 373  432
           
Sbjct: 182  94

Query: 433  472
           
Sbjct: 242  94

[Close]
BLAST of MU49608 vs. NCBI nr
Match: gi|659128006|ref|XP_008464001.1| (PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 5.2e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 187 MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 246
           MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1   MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 247 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 306
           SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61  SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

Query: 307  366
           
Sbjct: 121  95

Query: 367  426
           
Sbjct: 181  95

Query: 427  472
           
Sbjct: 241  95

[Close]
BLAST of MU49608 vs. NCBI nr
Match: gi|449466596|ref|XP_004151012.1| (PREDICTED: ubiquitin-like protein ATG12 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 187 MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 246
           MTSTESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1   MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 247 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 306
           SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61  SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

Query: 307  366
           
Sbjct: 121  95

Query: 367  426
           
Sbjct: 181  95

Query: 427  472
           
Sbjct: 241  95

[Close]
BLAST of MU49608 vs. NCBI nr
Match: gi|470135777|ref|XP_004303685.1| (PREDICTED: ubiquitin-like protein ATG12 [Fragaria vesca subsp. vesca])

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 1 

Query: 187 MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 246
           M+STES T+A+KVV+ LRATGDAPILKQ KFK+PGTDKF KVID++RR + RDTLFV+VN
Sbjct: 1   MSSTESPTAAKKVVIHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRDTLFVYVN 60

Query: 247 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 306
           SAFSP PDE V+DLYNNFG DGKLVVNYACSMAWG
Sbjct: 61  SAFSPNPDELVMDLYNNFGFDGKLVVNYACSMAWG 95

Query: 307  366
           
Sbjct: 121  95

Query: 367  426
           
Sbjct: 181  95

Query: 427  472
           
Sbjct: 241  95

[Close]
BLAST of MU49608 vs. NCBI nr
Match: gi|502156412|ref|XP_004510461.1| (PREDICTED: ubiquitin-like protein ATG12 [Cicer arietinum])

HSP 1 Score: 161.8 bits (408), Expect = 1.7e-36
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           +TES TSARKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 2   ATESPTSARKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRDTLFVYVNSA 61

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62  FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 94

Query: 313  372
           
Sbjct: 122  94

Query: 373  432
           
Sbjct: 182  94

Query: 433  472
           
Sbjct: 242  94

[Close]
BLAST of MU49608 vs. NCBI nr
Match: gi|590620730|ref|XP_007024614.1| (Ubiquitin-like superfamily protein isoform 2, partial [Theobroma cacao])

HSP 1 Score: 161.0 bits (406), Expect = 2.9e-36
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 193 STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 252
           + ES TS RKVVV LRATGDAPILKQ KFK+PGTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 22  AAESPTSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRDTLFVYVNSA 81

Query: 253 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 312
           FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 82  FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 114

Query: 313  372
           
Sbjct: 142  114

Query: 373  432
           
Sbjct: 202  114

Query: 433  472
           
Sbjct: 262  114

The following BLAST results are available for this feature:
BLAST of MU49608 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATG12_MEDTR7.5e-3777.89Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=ATG12 PE=3 SV=1[more]
AT12A_ARATH6.4e-3676.60Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana GN=ATG12A PE=1 SV=1[more]
AT12B_ARATH7.8e-3473.12Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana GN=ATG12B PE=1 SV=1[more]
ATG12_ORYSJ2.0e-2969.41Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica GN=ATG12 PE=3 SV=2[more]
ATG12_ORYSI2.0e-2969.41Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica GN=ATG12 PE=3 SV=2[more]
BLAST of MU49608 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIA6_CUCSA3.1e-4598.95Ubiquitin-like protein ATG12 OS=Cucumis sativus GN=Csa_3G846020 PE=3 SV=1[more]
A0A061GBK9_THECC5.8e-3681.72Ubiquitin-like protein ATG12 OS=Theobroma cacao GN=TCM_029125 PE=3 SV=1[more]
A0A061GCF0_THECC5.8e-3681.72Ubiquitin-like protein ATG12 (Fragment) OS=Theobroma cacao GN=TCM_029125 PE=3 SV... [more]
I3S9A1_LOTJA8.4e-3578.49Ubiquitin-like protein ATG12 OS=Lotus japonicus PE=2 SV=1[more]
G7L6T7_MEDTR8.4e-3577.89Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=MTR_8g020500 PE=3 SV=1[more]
BLAST of MU49608 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G54210.13.6e-3776.60 Ubiquitin-like superfamily protein[more]
AT3G13970.14.4e-3573.12 Ubiquitin-like superfamily protein[more]
BLAST of MU49608 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128006|ref|XP_008464001.1|5.2e-46100.00PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo][more]
gi|449466596|ref|XP_004151012.1|1.5e-4598.95PREDICTED: ubiquitin-like protein ATG12 [Cucumis sativus][more]
gi|470135777|ref|XP_004303685.1|3.4e-3780.00PREDICTED: ubiquitin-like protein ATG12 [Fragaria vesca subsp. vesca][more]
gi|502156412|ref|XP_004510461.1|1.7e-3682.80PREDICTED: ubiquitin-like protein ATG12 [Cicer arietinum][more]
gi|590620730|ref|XP_007024614.1|2.9e-3681.72Ubiquitin-like superfamily protein isoform 2, partial [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR007242Atg12
Vocabulary: Biological Process
TermDefinition
GO:0000045autophagosome assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000045 autophagosome assembly
cellular_component GO:0005737 cytoplasm
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C025809MELO3C025809gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D13F0915D13F09EST
46D13H0846D13H08EST
46D29C0746D29C07EST
A16G12A16G12EST
LA9YH12FM1LA9YH12FM1EST
PSI31G09PSI31G09EST
PSI34C04PSI34C04EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007242Ubiquitin-like protein Atg12PANTHERPTHR13385AUTOPHAGY PROTEIN 12coord: 1..85
score: 2.2
IPR007242Ubiquitin-like protein Atg12PFAMPF04110APG12coord: 12..85
score: 3.3
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 16..84
score: 3.