Cla97C07G140800 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G140800
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ubiquitin-like protein ATG12
Location	Cla97Chr07 : 28658083 .. 28660268 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTACAGAGTCGTCTAGTTCTGCTCGAAAAGGTGAGCTTTAGAGGACATATGAACAAATCCATCTTGAATCAGTGTTTAATTTGCTATTTTTGATGAATCGAACATTCAAACTTTATACAATTTTCAGACTTGTTGATCTGATACAGAAGAAGAATTTTTTTACAATTGTTGTTTTATTATGATACTTTCCAAATGATGTTTTCAATCAAGATTCATCCTGATTTATTTTGGTTTCTTTTCTCGCAGTGGTTGTCCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGGTTTGTATTACGTCAATTTTCGTCAGTTTGTGGATTTAAAGGTTGAAATTTGTATTATACTGTTTAAAATGTAAAATGGAAATCAATCTTGATGATTGTGAAAACTTTTGACCATTTGATTAGATCATAAAACTGAACTATAACCGACTGATTCTACTAATCGTGTATGCCCATGTAGGTAAGATTGTGTGTGCGCTTGTGATTATCTGAGTGAGGATAGATGGTCTAGGCTAATAGGTGAAGAAGACGATCAATCTAAGAGCCAAGGGAATGAAGCTTAAACTTTGCTTTTACAAAAGTATTAGATCCCATGGATGCAATGCCACATCCTTATTCCATACAAAATTCACATTGCCATCAACATGTGGTTTTTGTTGGGAATGCGACCAAAGTCCCACATTGTTTAGATAAGGGAGAGATCAATTATCTCTAATAGTATAAAGCATTTTGAGTGAAATAAAAACAAAGCTTTGGGAGTCAGATTTTGAGTGAAAACCTCGTTAGATTCTCTGTTACTCTTTGGACATGGGTCTCAAAATCTTTTTTCTCATTACCCGTTGAGTCAGATTTTACTTGACTGGAGCCCCCCTTCTTATAGCTGGCTCTCCTTTATGAGCTTCTTGTTTGCCCATGTTTTTTTTTTCAGTTAAAGTTCGGTTTTTCATCCAGAAAAAGATTTATAAAAATTATTGATTATGACAACTTGAAGAAATTTGGGTGTAAACTCATAGGAAATTAATTCCTAGGTAGGTGGCCATCATGGATTGAACCCTTGACCTCTTAGTCATTTATTGAGACTATGTCTCCTTTTTACCACTAGGCCAACCCATGATGGTTAACACTTGTGCTATTTATAATATCTGGAAGAAACTTATGAAATCACCGGCTTAGAATGTGTGGTTTTGCAAAATTTTCTACAGCAGCTCAGCCATTAAAGTTTATCCTTTTGGAATTTGGTTTTTTATATTTGTAAGTTTACAGAAAATGTTCATTCACATATTATACACATTTGACAGATGCCCGGAACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCAATTCAACGGGACACCTTGGTATTCATCTGATTTCTGGAATAGTCTCTCTTCCATCTGAAAATTCATTTGAAATTAATGACACTTCTCTATGCTAATTGTTTATATTCTTTGAAGTTTGTGTTTGTCAACAGTGCATTCTCACCAGGTCCAGATGAGACAGTTATTGATCTATATAATGTGAGTTGATATTGACTCATTTCTTCTCTTTATGTTCAAGTTGCGTTTGTACACTGTTTTCATTAACTTTTAGAAGAAGAAAAGGAGGGGAGGGATGTGTGCGTGTGTTGGAATCTATCTTAAAAAGAATCTATTTATTGGCCGGTCAAAAACTGTCATCTTAACTTAGGGGTATGTTCATTGAAGGTGTAGTGTAGACTTTTGATGTTGATGTTGGTCATGAATCATTTTTGAAAATACCCATCATTGTATATTCTTAGAAGGTGAAGGAAAAAGGCTTAAGCAATCAAAATTTGAAAACTTTCTGAAGCATGATATCCAAATTTGAAAACTTTCTAAGCATGATATACATAAGATCTTTTAGATTATCTGAAAATTAAATATAGCATCACCCTTCTCTGAGGGTTGGGTATGGACAGAATTATTCCCGACTTCATAGCAATATCTCCACCTGTTTCTTTACCTGAGTAAAAAAATATGGTTTTGCGTATCCACACGCTTTTAAAGTTTTCTCAAGTCCTGATGGCTTGGTATGTTGTTGATTATTCTTTTTTGTGTGCCAATTTGCAGAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA

mRNA sequence

ATGGCTTCTACAGAGTCGTCTAGTTCTGCTCGAAAAGTGGTTGTCCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCCGGAACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCAATTCAACGGGACACCTTGTTTGTGTTTGTCAACAGTGCATTCTCACCAGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA

Coding sequence (CDS)

ATGGCTTCTACAGAGTCGTCTAGTTCTGCTCGAAAAGTGGTTGTCCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCCGGAACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCAATTCAACGGGACACCTTGTTTGTGTTTGTCAACAGTGCATTCTCACCAGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA

Protein sequence

MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Homology

[Close]

BLAST of Cla97C07G140800 vs. NCBI nr
Match: XP_004151012.1 (PREDICTED: ubiquitin-like protein ATG12 [Cucumis sativus] >KGN59786.1 hypothetical protein Csa_3G846020 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-45
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. NCBI nr
Match: XP_008464001.1 (PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M STESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. NCBI nr
Match: XP_022955552.1 (ubiquitin-like protein ATG12 [Cucurbita moschata] >XP_023526053.1 ubiquitin-like protein ATG12 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 8.3e-43
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MAS ESSSSA+KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASMESSSSAKKVVVLLRSIGDAPILKQNKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. NCBI nr
Match: XP_022153405.1 (ubiquitin-like protein ATG12 [Momordica charantia] >XP_022153406.1 ubiquitin-like protein ATG12 [Momordica charantia])

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-42
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MAS ESSSS RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. NCBI nr
Match: XP_022980759.1 (ubiquitin-like protein ATG12 [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 4.1e-42
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MAS ESS+S++KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASMESSNSSKKVVVLLRSIGDAPILKQNKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. TrEMBL
Match: tr|A0A0A0LIA6|A0A0A0LIA6_CUCSA (Ubiquitin-like protein ATG12 OS=Cucumis sativus OX=3659 GN=Csa_3G846020 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. TrEMBL
Match: tr|A0A1S3CKI1|A0A1S3CKI1_CUCME (Ubiquitin-like protein ATG12 OS=Cucumis melo OX=3656 GN=LOC103501992 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.7e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M STESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. TrEMBL
Match: tr|A0A1S2YVA5|A0A1S2YVA5_CICAR (Ubiquitin-like protein ATG12 OS=Cicer arietinum OX=3827 GN=LOC101505935 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.5e-36
Identity = 76/93 (81.72%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 3  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
          +TES +SARKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 2  ATESPTSARKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRDTLFVYVNSA 61

Query: 63 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 94

[Close]

BLAST of Cla97C07G140800 vs. TrEMBL
Match: tr|A0A061GCF0|A0A061GCF0_THECC (Ubiquitin-like protein ATG12 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_029125 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 3   STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
           + ES +S RKVVV LRATGDAPILKQ KFK+PGTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 22  AAESPTSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRDTLFVYVNSA 81

Query: 63  FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
           FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 82  FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 114

[Close]

BLAST of Cla97C07G140800 vs. TrEMBL
Match: tr|A0A061GBK9|A0A061GBK9_THECC (Ubiquitin-like protein ATG12 OS=Theobroma cacao OX=3641 GN=TCM_029125 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 3  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
          + ES +S RKVVV LRATGDAPILKQ KFK+PGTDKF KVID++RR + RDTLFV+VNSA
Sbjct: 2  AAESPTSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRDTLFVYVNSA 61

Query: 63 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          FSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 FSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 94

[Close]

BLAST of Cla97C07G140800 vs. Swiss-Prot
Match: sp|Q1SF86|ATG12_MEDTR (Ubiquitin-like protein ATG12 OS=Medicago truncatula OX=3880 GN=ATG12 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.7e-37
Identity = 74/95 (77.89%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MA+ ES +S RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VN
Sbjct: 1  MAAAESPTSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRESLFVYVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 61 SAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 95

[Close]

BLAST of Cla97C07G140800 vs. Swiss-Prot
Match: sp|Q8S924|AT12A_ARATH (Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana OX=3702 GN=ATG12A PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-36
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 3  STESS--SSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 62
          +TESS  SS RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VN
Sbjct: 2  ATESSSPSSVRKVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVN 61

Query: 63 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 SAFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96

[Close]

BLAST of Cla97C07G140800 vs. Swiss-Prot
Match: sp|Q9LVK3|AT12B_ARATH (Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana OX=3702 GN=ATG12B PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.2e-34
Identity = 68/93 (73.12%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 3  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
          +TES +S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSA
Sbjct: 2  ATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSA 61

Query: 63 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          FSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 FSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94

[Close]

BLAST of Cla97C07G140800 vs. Swiss-Prot
Match: sp|A2YAG8|ATG12_ORYSI (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica OX=39946 GN=ATG12 PE=3 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-30
Identity = 59/89 (66.29%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 7  SSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPG 66
          ++  +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP 
Sbjct: 5  AAEQKKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPN 64

Query: 67 PDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          PDE +IDLYNNFGIDG+LVVNYA SMAWG
Sbjct: 65 PDELIIDLYNNFGIDGQLVVNYASSMAWG 93

[Close]

BLAST of Cla97C07G140800 vs. Swiss-Prot
Match: sp|Q69NP0|ATG12_ORYSJ (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG12 PE=3 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-30
Identity = 59/89 (66.29%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 7  SSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPG 66
          ++  +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP 
Sbjct: 5  AAEQKKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPN 64

Query: 67 PDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          PDE +IDLYNNFGIDG+LVVNYA SMAWG
Sbjct: 65 PDELIIDLYNNFGIDGQLVVNYASSMAWG 93

[Close]

BLAST of Cla97C07G140800 vs. TAIR10
Match: AT1G54210.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-37
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 3  STESS--SSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 62
          +TESS  SS RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VN
Sbjct: 2  ATESSSPSSVRKVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVN 61

Query: 63 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 SAFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96

[Close]

BLAST of Cla97C07G140800 vs. TAIR10
Match: AT3G13970.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-35
Identity = 68/93 (73.12%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 3  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
          +TES +S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSA
Sbjct: 2  ATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSA 61

Query: 63 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          FSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 FSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94

The following BLAST results are available for this feature:

BLAST of Cla97C07G140800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151012.1	5.2e-45	98.95	PREDICTED: ubiquitin-like protein ATG12 [Cucumis sativus] >KGN59786.1 hypothetic...	[more]
XP_008464001.1	1.2e-44	97.89	PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]	[more]
XP_022955552.1	8.3e-43	94.74	ubiquitin-like protein ATG12 [Cucurbita moschata] >XP_023526053.1 ubiquitin-like...	[more]
XP_022153405.1	1.1e-42	95.79	ubiquitin-like protein ATG12 [Momordica charantia] >XP_022153406.1 ubiquitin-lik...	[more]
XP_022980759.1	4.1e-42	92.63	ubiquitin-like protein ATG12 [Cucurbita maxima]	[more]

BLAST of Cla97C07G140800 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIA6\|A0A0A0LIA6_CUCSA	3.5e-45	98.95	Ubiquitin-like protein ATG12 OS=Cucumis sativus OX=3659 GN=Csa_3G846020 PE=3 SV=...	[more]
tr\|A0A1S3CKI1\|A0A1S3CKI1_CUCME	7.7e-45	97.89	Ubiquitin-like protein ATG12 OS=Cucumis melo OX=3656 GN=LOC103501992 PE=3 SV=1	[more]
tr\|A0A1S2YVA5\|A0A1S2YVA5_CICAR	6.5e-36	81.72	Ubiquitin-like protein ATG12 OS=Cicer arietinum OX=3827 GN=LOC101505935 PE=3 SV=...	[more]
tr\|A0A061GCF0\|A0A061GCF0_THECC	1.1e-35	80.65	Ubiquitin-like protein ATG12 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_029125...	[more]
tr\|A0A061GBK9\|A0A061GBK9_THECC	1.1e-35	80.65	Ubiquitin-like protein ATG12 OS=Theobroma cacao OX=3641 GN=TCM_029125 PE=3 SV=1	[more]

BLAST of Cla97C07G140800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1SF86\|ATG12_MEDTR	2.7e-37	77.89	Ubiquitin-like protein ATG12 OS=Medicago truncatula OX=3880 GN=ATG12 PE=3 SV=1	[more]
sp\|Q8S924\|AT12A_ARATH	2.3e-36	78.95	Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana OX=3702 GN=ATG12A PE=1 SV=...	[more]
sp\|Q9LVK3\|AT12B_ARATH	2.2e-34	73.12	Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana OX=3702 GN=ATG12B PE=1 SV=...	[more]
sp\|A2YAG8\|ATG12_ORYSI	4.2e-30	66.29	Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica OX=39946 GN=ATG12 PE=...	[more]
sp\|Q69NP0\|ATG12_ORYSJ	4.2e-30	66.29	Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG12 P...	[more]

BLAST of Cla97C07G140800 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54210.1	1.3e-37	78.95	Ubiquitin-like superfamily protein	[more]
AT3G13970.1	1.2e-35	73.12	Ubiquitin-like superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000045	autophagosome assembly

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR029071	Ubiquitin-like_domsf
IPR007242	Atg12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0006914	autophagy
biological_process	GO:0015031	protein transport
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G140800.1	Cla97C07G140800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 6..95 e-value: 5.5E-30 score: 105.7
IPR007242	Ubiquitin-like protein Atg12	PFAM	PF04110	APG12	coord: 12..95 e-value: 8.0E-30 score: 103.0
IPR007242	Ubiquitin-like protein Atg12	PANTHER	PTHR13385	AUTOPHAGY PROTEIN 12	coord: 4..95
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 11..94

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G140800	Csa3G846020	Cucumber (Chinese Long) v2	cuwmbB240
Cla97C07G140800	MELO3C025809	Melon (DHL92) v3.5.1	mewmbB345
Cla97C07G140800	ClCG07G014030	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G140800	CSPI03G41050	Wild cucumber (PI 183967)	cpiwmbB249
Cla97C07G140800	Cucsa.340800	Cucumber (Gy14) v1	cgywmbB589
Cla97C07G140800	CmoCh14G012680	Cucurbita moschata (Rifu)	cmowmbB255
Cla97C07G140800	CsGy3G038550	Cucumber (Gy14) v2	cgybwmbB229
Cla97C07G140800	MELO3C025809.2	Melon (DHL92) v3.6.1	medwmbB333
Cla97C07G140800	Carg06415	Silver-seed gourd	carwmbB0126
Cla97C07G140800	Carg04327	Silver-seed gourd	carwmbB0205
Cla97C07G140800	CsaV3_3G043520	Cucumber (Chinese Long) v3	cucwmbB242

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G140800	Watermelon (97103) v2	wmbwmbB166
Cla97C07G140800	Silver-seed gourd	carwmbB0940
Cla97C07G140800	Silver-seed gourd	carwmbB1088
Cla97C07G140800	Cucumber (Gy14) v2	cgybwmbB150
Cla97C07G140800	Cucumber (Gy14) v2	cgybwmbB228
Cla97C07G140800	Cucumber (Gy14) v2	cgybwmbB525
Cla97C07G140800	Cucumber (Gy14) v1	cgywmbB171
Cla97C07G140800	Cucumber (Gy14) v1	cgywmbB356
Cla97C07G140800	Cucumber (Gy14) v1	cgywmbB618
Cla97C07G140800	Cucurbita maxima (Rimu)	cmawmbB192
Cla97C07G140800	Cucurbita maxima (Rimu)	cmawmbB275
Cla97C07G140800	Cucurbita maxima (Rimu)	cmawmbB382
Cla97C07G140800	Cucurbita maxima (Rimu)	cmawmbB496
Cla97C07G140800	Cucurbita maxima (Rimu)	cmawmbB926
Cla97C07G140800	Cucurbita moschata (Rifu)	cmowmbB176
Cla97C07G140800	Cucurbita moschata (Rifu)	cmowmbB365
Cla97C07G140800	Cucurbita moschata (Rifu)	cmowmbB478
Cla97C07G140800	Cucurbita moschata (Rifu)	cmowmbB902
Cla97C07G140800	Wild cucumber (PI 183967)	cpiwmbB159
Cla97C07G140800	Wild cucumber (PI 183967)	cpiwmbB248
Cla97C07G140800	Wild cucumber (PI 183967)	cpiwmbB578
Cla97C07G140800	Cucumber (Chinese Long) v3	cucwmbB157
Cla97C07G140800	Cucumber (Chinese Long) v3	cucwmbB241
Cla97C07G140800	Cucumber (Chinese Long) v3	cucwmbB575
Cla97C07G140800	Cucumber (Chinese Long) v2	cuwmbB156
Cla97C07G140800	Cucumber (Chinese Long) v2	cuwmbB239
Cla97C07G140800	Cucumber (Chinese Long) v2	cuwmbB552
Cla97C07G140800	Bottle gourd (USVL1VR-Ls)	lsiwmbB102
Cla97C07G140800	Bottle gourd (USVL1VR-Ls)	lsiwmbB203
Cla97C07G140800	Bottle gourd (USVL1VR-Ls)	lsiwmbB405
Cla97C07G140800	Melon (DHL92) v3.6.1	medwmbB189
Cla97C07G140800	Melon (DHL92) v3.6.1	medwmbB392
Cla97C07G140800	Melon (DHL92) v3.5.1	mewmbB204
Cla97C07G140800	Watermelon (Charleston Gray)	wcgwmbB029
Cla97C07G140800	Watermelon (97103) v1	wmwmbB035
Cla97C07G140800	Watermelon (97103) v1	wmwmbB173
Cla97C07G140800	Wax gourd	wgowmbB597
Cla97C07G140800	Wax gourd	wgowmbB208
Cla97C07G140800	Wax gourd	wgowmbB664