Carg06952 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACTTCTCTTTCTTCTGCTACAGCAATTCCACGCCCAAGCATCGGCATCGGCACCGTCAGTTCCATCTCTTCGTTCAACGTCTCCAACAGCTTAAGCACTCGGTCTCAACCGCGAAGCCTCGTGAAGTGCGAATCAAGTGCATCGGCAGCAGACCCCACGCCGCCGGCAAAGAGTTGGAAACTCGAGATCGGCTCCCCCGTTATCGTAGTCGAGGCTCCCAAAATGATAAAGACCGCAGCCTCGGTTCCATGCCTCAGGGTCAATTCCGGCATAATCAACCCCGGCGACGTTGGCAGGTGAGCGGTCGATCGATCTTCGTCCTCTGTCTTTGGCATTGCTTCGAACACCTTATGTGCAACGCTTGTAACTAATGCCTGCCTGCTGCGTGCGTAATTGAACAGAATCGTGTCAAGAAAACCGAAGGACGTGTGGGGCGTGCGGCTTAAAGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGACCATTAGAGCTGGATCAATGAGCCCGTCGTGTTGAATGTTGTTGATCGAAACATAGTTCAATAATTAAGGCCTTATGATCTAATCCAAAAGATCAAATGTTACAAATCTCACCTTCAATTAATTAAAAAAACACTCGTGCATGATTGAACTAGACACTGAATTTTACTGCTTCGGTATCACTTTATCGATGATGAGTTTACTCAAATATCCCTAATTATATAACTAGTCTTCTCTTGGAGTTGATATACGTGAGGTTAGGAGAGGTG ATGGCCACTTCTCTTTCTTCTGCTACAGCAATTCCACGCCCAAGCATCGGCATCGGCACCGTCAGTTCCATCTCTTCGTTCAACGTCTCCAACAGCTTAAGCACTCGGTCTCAACCGCGAAGCCTCGTGAAGTGCGAATCAAGTGCATCGGCAGCAGACCCCACGCCGCCGGCAAAGAGTTGGAAACTCGAGATCGGCTCCCCCGTTATCGTAGTCGAGGCTCCCAAAATGATAAAGACCGCAGCCTCGGTTCCATGCCTCAGGGTCAATTCCGGCATAATCAACCCCGGCGACGTTGGCAGAATCGTGTCAAGAAAACCGAAGGACGTGTGGGGCGTGCGGCTTAAAGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGACCATTAGAGCTGGATCAATGAGCCCGTCGTGTTGAATGTTGTTGATCGAAACATAGTTCAATAATTAAGGCCTTATGATCTAATCCAAAAGATCAAATGTTACAAATCTCACCTTCAATTAATTAAAAAAACACTCGTGCATGATTGAACTAGACACTGAATTTTACTGCTTCGGTATCACTTTATCGATGATGAGTTTACTCAAATATCCCTAATTATATAACTAGTCTTCTCTTGGAGTTGATATACGTGAGGTTAGGAGAGGTG ATGGCCACTTCTCTTTCTTCTGCTACAGCAATTCCACGCCCAAGCATCGGCATCGGCACCGTCAGTTCCATCTCTTCGTTCAACGTCTCCAACAGCTTAAGCACTCGGTCTCAACCGCGAAGCCTCGTGAAGTGCGAATCAAGTGCATCGGCAGCAGACCCCACGCCGCCGGCAAAGAGTTGGAAACTCGAGATCGGCTCCCCCGTTATCGTAGTCGAGGCTCCCAAAATGATAAAGACCGCAGCCTCGGTTCCATGCCTCAGGGTCAATTCCGGCATAATCAACCCCGGCGACGTTGGCAGAATCGTGTCAAGAAAACCGAAGGACGTGTGGGGCGTGCGGCTTAAAGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGACCATTAGAGCTGGATCAATGA MATSLSSATAIPRPSIGIGTVSSISSFNVSNSLSTRSQPRSLVKCESSASAADPTPPAKSWKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGTYLIDGRYFRPLELDQ
BLAST of Carg06952 vs. NCBI nr
Match: XP_022944245.1 (uncharacterized protein LOC111448751 [Cucurbita moschata]) HSP 1 Score: 255.4 bits (651), Expect = 1.1e-64 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Carg06952 vs. NCBI nr
Match: XP_023513105.1 (uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.0 bits (637), Expect = 4.6e-63 Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Carg06952 vs. NCBI nr
Match: XP_022985824.1 (uncharacterized protein LOC111483753 [Cucurbita maxima]) HSP 1 Score: 246.9 bits (629), Expect = 3.9e-62 Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of Carg06952 vs. NCBI nr
Match: XP_008449832.1 (PREDICTED: uncharacterized protein LOC103491596 [Cucumis melo]) HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51 Identity = 116/135 (85.93%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Carg06952 vs. NCBI nr
Match: XP_004142251.1 (PREDICTED: uncharacterized protein LOC101219406 [Cucumis sativus] >KGN54061.1 hypothetical protein Csa_4G279890 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47 Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of Carg06952 vs. TAIR10
Match: AT5G20935.1 (unknown protein) HSP 1 Score: 128.3 bits (321), Expect = 3.7e-30 Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of Carg06952 vs. TrEMBL
Match: tr|A0A1S3BMX2|A0A1S3BMX2_CUCME (uncharacterized protein LOC103491596 OS=Cucumis melo OX=3656 GN=LOC103491596 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51 Identity = 116/135 (85.93%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Carg06952 vs. TrEMBL
Match: tr|A0A0A0L1Q6|A0A0A0L1Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279890 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.8e-47 Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of Carg06952 vs. TrEMBL
Match: tr|A0A2I4H6Q3|A0A2I4H6Q3_9ROSI (uncharacterized protein LOC109013992 OS=Juglans regia OX=51240 GN=LOC109013992 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33 Identity = 88/138 (63.77%), Postives = 101/138 (73.19%), Query Frame = 0
BLAST of Carg06952 vs. TrEMBL
Match: tr|A0A2N9HEJ5|A0A2N9HEJ5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37982 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.2e-32 Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Carg06952 vs. TrEMBL
Match: tr|W9RP34|W9RP34_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000099 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.8e-32 Identity = 83/134 (61.94%), Postives = 99/134 (73.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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