CsaV3_4G023270 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAATATAAGAAGATATCAAATTAAATACAATTAAACTTGCAACGTCAAAGATTAAATTCTAATAATTTAAACCTTTCGAATAGGTAGTTGCATATCATATTTTCGATGGGTTCATTTTTTTTTGTTCATATATCGTACAATTGATAAAAATACAAATTTGAAAAACAAATTAAATGAAAGAAAAAAAAAAACATATGATTAGATAGATAATTAGATCTAAAGTCTAAAGAAAATGGGTCCACCTTAACTATCGTTCTAACCACAACACCCGTTCCCAAATATAACATTGACTCGAAACATTGGTGATAAGATACGATTCCAATGGCTGCTTATCTTCCTCCTACAACACCATTCTCGCGCCCCAACATTAGAATCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACACTCTGACCACTCGTTCACAACCGCGAAGCATCGTGAAATGCGAATCCAGTGCATCGCCAGCAGACGGCCAGACGTCGCCGCCAAAAAGTCAGAAACTCGAGATCGGGTCCCCCGTTATCGTAATCGAGGCTCCCAAGATGATAAAGACCGCAGCCTCAGTTCCATGTCTCAGGGTCAATTCCGGCATAATCAACCCCGGCGACGTCGGCAGGTGATTACCCAATTGCCACTCGTCCTCTGTCTTTAACATTTCATCGAACACATTACGTGCATCGTTTTTCTTTTTTTGGTAACTAAGTACTGTCTGTTCCGTTGCTTTATCGTGTGTGATTGAACAGAATCGTGTCGAGAAAACCTAAGGACGTGTGGGCCGTGCGGCTTAAGGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGAGCATTAGAACTCGATCAATAGCTTTAACTTGTCCGGAGAGGCTTTCGATTTGAAGGTTCCGAGCTTACAAATTCACCTTTCATGGCGATTTCGTTGGAATGCGGCGTGTGTTTGAATCCATTTGTAGGAAATCATTCCGTTATCGTTGCATGTTGTTCAGATCACCCTCCATGTCTCTATCTTGATGCAGCAGATCGAATGCAGCTTGATTAGCCATGAATTTAGGAGTCTTATGTGCATAGTTTATTCCTTACGAATAAATTTTCGATTCTATAACATATATTTTATTGCAAATTTGTTATGCATCTTCGTGGAATTCACGATGAAACTCGAACCCTCAATCCCGTTTGATGGTTTCTTTGTTGCATGTTTCCATTGTATTTTAAGCATGGATATAATTTTTGGTTTACCATTATGTATTAATATATTAATATAGAGATCGGTTGGTTCAAATTAGCATGAAATTAAAAATAACTATGTACACATGGAGCAATATATGTGTATGAAATTAAAAGTAACTATATACATATGGAGCAAACATACGTGTTTGTGTGTCACGTCAAATTGTTTAAATATAGTTTTTTATTTATTGCCAG ATGGCTGCTTATCTTCCTCCTACAACACCATTCTCGCGCCCCAACATTAGAATCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACACTCTGACCACTCGTTCACAACCGCGAAGCATCGTGAAATGCGAATCCAGTGCATCGCCAGCAGACGGCCAGACGTCGCCGCCAAAAAGTCAGAAACTCGAGATCGGGTCCCCCGTTATCGTAATCGAGGCTCCCAAGATGATAAAGACCGCAGCCTCAGTTCCATGTCTCAGGGTCAATTCCGGCATAATCAACCCCGGCGACGTCGGCAGAATCGTGTCGAGAAAACCTAAGGACGTGTGGGCCGTGCGGCTTAAGGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGAGCATTAGAACTCGATCAATAG ATGGCTGCTTATCTTCCTCCTACAACACCATTCTCGCGCCCCAACATTAGAATCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACACTCTGACCACTCGTTCACAACCGCGAAGCATCGTGAAATGCGAATCCAGTGCATCGCCAGCAGACGGCCAGACGTCGCCGCCAAAAAGTCAGAAACTCGAGATCGGGTCCCCCGTTATCGTAATCGAGGCTCCCAAGATGATAAAGACCGCAGCCTCAGTTCCATGTCTCAGGGTCAATTCCGGCATAATCAACCCCGGCGACGTCGGCAGAATCGTGTCGAGAAAACCTAAGGACGTGTGGGCCGTGCGGCTTAAGGTCGGGACTTACCTCATAGATGGAAGGTATTTTAGAGCATTAGAACTCGATCAATAG MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQTSPPKSQKLEIGSPVIVIEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYLIDGRYFRALELDQ
BLAST of CsaV3_4G023270 vs. NCBI nr
Match: XP_004142251.1 (PREDICTED: uncharacterized protein LOC101219406 [Cucumis sativus] >KGN54061.1 hypothetical protein Csa_4G279890 [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 1.5e-66 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. NCBI nr
Match: XP_008449832.1 (PREDICTED: uncharacterized protein LOC103491596 [Cucumis melo]) HSP 1 Score: 235.7 bits (600), Expect = 9.0e-59 Identity = 122/133 (91.73%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. NCBI nr
Match: XP_023513105.1 (uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48 Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. NCBI nr
Match: XP_022944245.1 (uncharacterized protein LOC111448751 [Cucurbita moschata]) HSP 1 Score: 201.1 bits (510), Expect = 2.4e-48 Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. NCBI nr
Match: XP_022985824.1 (uncharacterized protein LOC111483753 [Cucurbita maxima]) HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48 Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. TAIR10
Match: AT5G20935.1 (unknown protein) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-31 Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. TrEMBL
Match: tr|A0A0A0L1Q6|A0A0A0L1Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279890 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.0e-66 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. TrEMBL
Match: tr|A0A1S3BMX2|A0A1S3BMX2_CUCME (uncharacterized protein LOC103491596 OS=Cucumis melo OX=3656 GN=LOC103491596 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.9e-59 Identity = 122/133 (91.73%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. TrEMBL
Match: tr|M5WDH9|M5WDH9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G149700 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.6e-32 Identity = 74/108 (68.52%), Postives = 85/108 (78.70%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. TrEMBL
Match: tr|A0A2I4H6Q3|A0A2I4H6Q3_9ROSI (uncharacterized protein LOC109013992 OS=Juglans regia OX=51240 GN=LOC109013992 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.6e-32 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of CsaV3_4G023270 vs. TrEMBL
Match: tr|A0A2P2JSA8|A0A2P2JSA8_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.6e-32 Identity = 79/130 (60.77%), Postives = 93/130 (71.54%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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