Carg25705 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
BLAST of Carg25705 vs. NCBI nr
Match: XP_022924713.1 (dof zinc finger protein 2-like [Cucurbita moschata]) HSP 1 Score: 310.8 bits (795), Expect = 2.8e-81 Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of Carg25705 vs. NCBI nr
Match: XP_023527390.1 (dof zinc finger protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.3 bits (713), Expect = 9.1e-72 Identity = 134/145 (92.41%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of Carg25705 vs. NCBI nr
Match: XP_022980851.1 (dof zinc finger protein 2-like [Cucurbita maxima]) HSP 1 Score: 264.2 bits (674), Expect = 3.0e-67 Identity = 130/146 (89.04%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Carg25705 vs. NCBI nr
Match: XP_011650669.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus] >KGN56409.1 hypothetical protein Csa_3G119420 [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 2.2e-54 Identity = 108/146 (73.97%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Carg25705 vs. NCBI nr
Match: XP_016898925.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo]) HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48 Identity = 98/145 (67.59%), Postives = 103/145 (71.03%), Query Frame = 0
BLAST of Carg25705 vs. TAIR10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 124.4 bits (311), Expect = 6.8e-29 Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Carg25705 vs. TAIR10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of Carg25705 vs. TAIR10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 117.5 bits (293), Expect = 8.3e-27 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of Carg25705 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26 Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Carg25705 vs. TAIR10
Match: AT3G21270.1 (DOF zinc finger protein 2) HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25 Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q9M161|DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2) HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27 Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q43385|DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of Carg25705 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25 Identity = 65/139 (46.76%), Postives = 77/139 (55.40%), Query Frame = 0
BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q9ZPY0|DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25 Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Carg25705 vs. TrEMBL
Match: tr|A0A0A0L5U8|A0A0A0L5U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54 Identity = 108/146 (73.97%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Carg25705 vs. TrEMBL
Match: tr|A0A1S4DT96|A0A1S4DT96_CUCME (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48 Identity = 98/145 (67.59%), Postives = 103/145 (71.03%), Query Frame = 0
BLAST of Carg25705 vs. TrEMBL
Match: tr|U5FT89|U5FT89_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G100900v3 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 4.2e-33 Identity = 85/211 (40.28%), Postives = 106/211 (50.24%), Query Frame = 0
BLAST of Carg25705 vs. TrEMBL
Match: tr|A0A0D2MKN3|A0A0D2MKN3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G076400 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.3e-31 Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 0
BLAST of Carg25705 vs. TrEMBL
Match: tr|V7BQJ6|V7BQJ6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G114900g PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30 Identity = 69/100 (69.00%), Postives = 76/100 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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