CsGy3G007920 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G007920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	dof zinc finger protein DOF3.7
Location	Chr3 : 6715431 .. 6715946 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGATGATGGAGTCCGGCGCCAACGGCGGGGGAGGAGGAGGCGGCGGTGGAGGGTTGAAGGGAAAAGGAAGGCCACAAGAGCAATTGAACTGCCCAAGATGCAAATCAAGCAACACAAAATTTTGTTACTACAACAATTATAGTCTCACACAGCCGAGGTATTTTTGCAAATCCTGCCGCCGGTATTGGACGGAGGGTGGTTCTCTTAGGAATATTCCCGTCGGAGGAGGGTCCAGGAAGAACAGGAAACCGCACGGTTCGGTTTCTGGGTCTGGTTCGGTTCACCACCCTCAGCCGCAGCCGCAGGTGTATCAAGCGCAGGATCTGAACTTGGGGTTTGCAACGACGGCGGAGGCTACGACGGCGATGGACAACGGCGGGCATGGAGGGTTTGGTTGTTATATTCCGAATTTGATGCCGTATTCGGGACGTGAGACGGCGGCGGTGGAAGAGAATTCCGGTAATAATGGGTATTGGAATGGGATGTTTGGTGGAGGGCCGCCGTGGTAG

mRNA sequence

ATGGAGGCGATGATGGAGTCCGGCGCCAACGGCGGGGGAGGAGGAGGCGGCGGTGGAGGGTTGAAGGGAAAAGGAAGGCCACAAGAGCAATTGAACTGCCCAAGATGCAAATCAAGCAACACAAAATTTTGTTACTACAACAATTATAGTCTCACACAGCCGAGGTATTTTTGCAAATCCTGCCGCCGGTATTGGACGGAGGGTGGTTCTCTTAGGAATATTCCCGTCGGAGGAGGGTCCAGGAAGAACAGGAAACCGCACGGTTCGGTTTCTGGGTCTGGTTCGGTTCACCACCCTCAGCCGCAGCCGCAGGTGTATCAAGCGCAGGATCTGAACTTGGGGTTTGCAACGACGGCGGAGGCTACGACGGCGATGGACAACGGCGGGCATGGAGGGTTTGGTTGTTATATTCCGAATTTGATGCCGTATTCGGGACGTGAGACGGCGGCGGTGGAAGAGAATTCCGGTAATAATGGGTATTGGAATGGGATGTTTGGTGGAGGGCCGCCGTGGTAG

Coding sequence (CDS)

ATGGAGGCGATGATGGAGTCCGGCGCCAACGGCGGGGGAGGAGGAGGCGGCGGTGGAGGGTTGAAGGGAAAAGGAAGGCCACAAGAGCAATTGAACTGCCCAAGATGCAAATCAAGCAACACAAAATTTTGTTACTACAACAATTATAGTCTCACACAGCCGAGGTATTTTTGCAAATCCTGCCGCCGGTATTGGACGGAGGGTGGTTCTCTTAGGAATATTCCCGTCGGAGGAGGGTCCAGGAAGAACAGGAAACCGCACGGTTCGGTTTCTGGGTCTGGTTCGGTTCACCACCCTCAGCCGCAGCCGCAGGTGTATCAAGCGCAGGATCTGAACTTGGGGTTTGCAACGACGGCGGAGGCTACGACGGCGATGGACAACGGCGGGCATGGAGGGTTTGGTTGTTATATTCCGAATTTGATGCCGTATTCGGGACGTGAGACGGCGGCGGTGGAAGAGAATTCCGGTAATAATGGGTATTGGAATGGGATGTTTGGTGGAGGGCCGCCGTGGTAG

Protein sequence

MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAEATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW

Homology

[Close]

BLAST of CsGy3G007920 vs. NCBI nr
Match: XP_011650669.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus] >KGN56409.1 hypothetical protein Csa_3G119420 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 7.1e-77
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60
           MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAE 120
           CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAE
Sbjct: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAE 120

Query: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW 172
           ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW
Sbjct: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW 171

[Close]

BLAST of CsGy3G007920 vs. NCBI nr
Match: XP_016898925.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 3.2e-61
Identity = 130/146 (89.04%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRK
Sbjct: 30  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNRK 89

Query: 86  PHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAEATTAMDNGGHGGFGCYIPNLMPYSG 145
           P GSV  XXXXXXXXXXXXXX           TAEATTAM+NGGHGGFGCYIPNLMPYSG
Sbjct: 90  PTGSV-XXXXXXXXXXXXXXXXXXXXXXXXXXTAEATTAMENGGHGGFGCYIPNLMPYSG 149

Query: 146 RETAAVEENSGNNGYWNGMFGGGPPW 172
           RETAAVEENSGNNGYWNGMFGGGPPW
Sbjct: 150 RETAAVEENSGNNGYWNGMFGGGPPW 174

[Close]

BLAST of CsGy3G007920 vs. NCBI nr
Match: XP_022924713.1 (dof zinc finger protein 2-like [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-54
Identity = 128/171 (74.85%), Postives = 135/171 (78.95%), Query Frame = 0


Query: 1   MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60
           MEAMM+S    XXXXXXXXXXXXXXRPQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MEAMMQS----XXXXXXXXXXXXXXRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTA- 120
           CRRYWTEGGSLRNIPVGGGSRKNRKP  SV+G              QA DLNLGF TT  
Sbjct: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPPASVTG-SASANHAPPQQVYQAHDLNLGFPTTTA 120

Query: 121 -EATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGP 170
                 ++NGGHGGFG YIPNLMPY  R+T AVEEN G+NGYWNGMF GGP
Sbjct: 121 XXXXAGIENGGHGGFGFYIPNLMPYPARDT-AVEENPGSNGYWNGMFSGGP 165

[Close]

BLAST of CsGy3G007920 vs. NCBI nr
Match: XP_023527390.1 (dof zinc finger protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50
Identity = 104/146 (71.23%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 29  EQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHG 88
           EQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP  
Sbjct: 27  EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPAA 86

Query: 89  SVSGXXXXXXXXXXXXXXQAQDLNLGFAT-----TAEATTAMDNGGHGGFGCYIPNLMPY 148
           SV+G              QA DLNLGF T             +NGGHGGFG YIPNLMPY
Sbjct: 87  SVTG-SASANHAPPQPVYQAHDLNLGFPTXXXXXXXXXXXXXENGGHGGFGFYIPNLMPY 146

Query: 149 SGRETAAVEENSGNNGYWNGMFGGGP 170
             R+T AVEEN G+NGYWNGMF GGP
Sbjct: 147 PARDT-AVEENPGSNGYWNGMFSGGP 170

[Close]

BLAST of CsGy3G007920 vs. NCBI nr
Match: XP_022980851.1 (dof zinc finger protein 2-like [Cucurbita maxima])

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 102/147 (69.39%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 29  EQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHG 88
           EQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP  
Sbjct: 30  EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPAA 89

Query: 89  SVSGXXXXXXXXXXXXXXQAQDLNLGFAT------TAEATTAMDNGGHGGFGCYIPNLMP 148
           SV+G              QA DLNLGF T                 GHGGFG YIPNLMP
Sbjct: 90  SVTG--SASANHAPQPVYQAHDLNLGFPTXXXXXXXXXXXXXXXXXGHGGFGFYIPNLMP 149

Query: 149 YSGRETAAVEENSGNNGYWNGMFGGGP 170
           Y  R+T AVEEN G+NGYWNGMF GGP
Sbjct: 150 YPARDT-AVEENPGSNGYWNGMFSGGP 173

[Close]

BLAST of CsGy3G007920 vs. TAIR10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 125.2 bits (313), Expect = 4.0e-29
Identity = 63/108 (58.33%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQE  NCPRC SSNTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 86  ---PHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAEATTAMDNGGH 131
              P+ S S                  DLN  F  T+ A+++  +  H
Sbjct: 123 LPFPNSSTSS-----------STKNLPDLNPPFVFTSSASSSNPSKTH 159

[Close]

BLAST of CsGy3G007920 vs. TAIR10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++
Sbjct: 69  RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128

[Close]

BLAST of CsGy3G007920 vs. TAIR10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-26
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 79
           RPQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG
Sbjct: 75  RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

[Close]

BLAST of CsGy3G007920 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 27  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP 86
           P+  L CPRC S+NTKFCYYNNYSLTQPRYFCKSCRRYWT+GG+LRNIPVGGG RKN++ 
Sbjct: 51  PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRS 110

Query: 87  HGSVS 92
             S +
Sbjct: 111 TSSAA 115

[Close]

BLAST of CsGy3G007920 vs. TAIR10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 114.0 bits (284), Expect = 9.1e-26
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 32 NCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHGS 90
          +CPRC SSNTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGGG RK+R+P  S
Sbjct: 26 SCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSS 83

[Close]

BLAST of CsGy3G007920 vs. Swiss-Prot
Match: sp|Q9M161|DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 7.1e-28
Identity = 63/108 (58.33%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQE  NCPRC SSNTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 86  ---PHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAEATTAMDNGGH 131
              P+ S S                  DLN  F  T+ A+++  +  H
Sbjct: 123 LPFPNSSTSS-----------STKNLPDLNPPFVFTSSASSSNPSKTH 159

[Close]

BLAST of CsGy3G007920 vs. Swiss-Prot
Match: sp|Q43385|DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++
Sbjct: 69  RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128

[Close]

BLAST of CsGy3G007920 vs. Swiss-Prot
Match: sp|Q9ZPY0|DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 4.3e-25
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 79
           RPQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG
Sbjct: 75  RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

[Close]

BLAST of CsGy3G007920 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.4e-25
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 27  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP 86
           P+  L CPRC S+NTKFCYYNNYSLTQPRYFCKSCRRYWT+GG+LRNIPVGGG RKN++ 
Sbjct: 51  PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRS 110

Query: 87  HGSVS 92
             S +
Sbjct: 111 TSSAA 115

[Close]

BLAST of CsGy3G007920 vs. Swiss-Prot
Match: sp|Q9SVC5|DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 32 NCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHGS 90
          +CPRC SSNTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGGG RK+R+P  S
Sbjct: 26 SCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSS 83

[Close]

BLAST of CsGy3G007920 vs. TrEMBL
Match: tr|A0A0A0L5U8|A0A0A0L5U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.7e-77
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60
           MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MEAMMESGAXXXXXXXXXXXXXXXXRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAE 120
           CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAE
Sbjct: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAE 120

Query: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW 172
           ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW
Sbjct: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPW 171

[Close]

BLAST of CsGy3G007920 vs. TrEMBL
Match: tr|A0A1S4DT96|A0A1S4DT96_CUCME (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.1e-61
Identity = 130/146 (89.04%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRK
Sbjct: 30  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNRK 89

Query: 86  PHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAEATTAMDNGGHGGFGCYIPNLMPYSG 145
           P GSV  XXXXXXXXXXXXXX           TAEATTAM+NGGHGGFGCYIPNLMPYSG
Sbjct: 90  PTGSV-XXXXXXXXXXXXXXXXXXXXXXXXXXTAEATTAMENGGHGGFGCYIPNLMPYSG 149

Query: 146 RETAAVEENSGNNGYWNGMFGGGPPW 172
           RETAAVEENSGNNGYWNGMFGGGPPW
Sbjct: 150 RETAAVEENSGNNGYWNGMFGGGPPW 174

[Close]

BLAST of CsGy3G007920 vs. TrEMBL
Match: tr|A0A0D2MKN3|A0A0D2MKN3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G076400 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.2e-29
Identity = 66/100 (66.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 26  RPQEQ--LNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 85
           RPQ++  LNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKN
Sbjct: 35  RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKN 94

Query: 86  RKPHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTAEATT 124
           ++P  S S               Q QDLNL F TT +  T
Sbjct: 95  KRPSSSFSS-PSLSSSSKNPKIHQPQDLNLAFKTTTQGYT 133

[Close]

BLAST of CsGy3G007920 vs. TrEMBL
Match: tr|U5FT89|U5FT89_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G100900v3 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 85/209 (40.67%), Postives = 101/209 (48.33%), Query Frame = 0


Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQEQLNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PVGGGSRKN++
Sbjct: 19  RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 78

Query: 86  PHGSVSG------------XXXXXXXXXXXXXXQAQDLNLGFAT--TAEATTAMDNG-GH 145
              S                             + QDLNL F     ++A   + +G   
Sbjct: 79  STSSSVATSSSKLPDLNPPSLSHFSSQNPKSTHEGQDLNLAFPAMQDSQAMELLRSGFAS 138

Query: 146 GGFGCYIPNLMP-----------------------------------YSGR--------- 169
            G   +IP  MP                                    SGR         
Sbjct: 139 RGLNTFIPTPMPDSNTLYSSGGFPLQELRPTLSFPADGLGSRYGIQENSGRLLFPFGELK 198

[Close]

BLAST of CsGy3G007920 vs. TrEMBL
Match: tr|S4WW66|S4WW66_SOYBN (Dof-type zinc finger DNA-binding family protein (Fragment) OS=Glycine max OX=3847 GN=Glyma16g02550 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.5e-27
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 26 RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
          RPQEQLNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 9  RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKK 68

The following BLAST results are available for this feature:

BLAST of CsGy3G007920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650669.1	7.1e-77	100.00	PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus] >KGN56409.1 hypothet...	[more]
XP_016898925.1	3.2e-61	89.04	PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo]	[more]
XP_022924713.1	3.8e-54	74.85	dof zinc finger protein 2-like [Cucurbita moschata]	[more]
XP_023527390.1	2.0e-50	71.23	dof zinc finger protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022980851.1	2.4e-48	69.39	dof zinc finger protein 2-like [Cucurbita maxima]	[more]

BLAST of CsGy3G007920 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00940.1	4.0e-29	58.33	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	1.2e-28	85.00	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	2.4e-26	90.57	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	4.1e-26	75.38	TARGET OF MONOPTEROS 6	[more]
AT3G52440.1	9.1e-26	82.76	Dof-type zinc finger DNA-binding family protein	[more]

BLAST of CsGy3G007920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M161\|DOF41_ARATH	7.1e-28	58.33	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]
sp\|Q43385\|DOF37_ARATH	2.1e-27	85.00	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
sp\|Q9ZPY0\|DOF25_ARATH	4.3e-25	90.57	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
sp\|Q84TE9\|DOF53_ARATH	7.4e-25	75.38	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
sp\|Q9SVC5\|DOF35_ARATH	1.6e-24	82.76	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]

BLAST of CsGy3G007920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5U8\|A0A0A0L5U8_CUCSA	4.7e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1	[more]
tr\|A0A1S4DT96\|A0A1S4DT96_CUCME	2.1e-61	89.04	dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1	[more]
tr\|A0A0D2MKN3\|A0A0D2MKN3_GOSRA	8.2e-29	66.00	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G076400 PE=4 ...	[more]
tr\|U5FT89\|U5FT89_POPTR	1.4e-28	40.67	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G100900v3 PE=...	[more]
tr\|S4WW66\|S4WW66_SOYBN	4.5e-27	91.67	Dof-type zinc finger DNA-binding family protein (Fragment) OS=Glycine max OX=384...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR003851	Znf_Dof

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G007920.1	CsGy3G007920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 29..85 e-value: 2.8E-33 score: 113.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 33..69
IPR003851	Zinc finger, Dof-type	PRODOM	PD007478		coord: 26..85 e-value: 2.0E-25 score: 285.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 31..85 score: 28.901
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..102
None	No IPR available	PANTHER	PTHR31992	FAMILY NOT NAMED	coord: 24..121
None	No IPR available	PANTHER	PTHR31992:SF78	DOF ZINC FINGER PROTEIN DOF1.8-RELATED	coord: 24..121

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G007920	Cla021140	Watermelon (97103) v1	cgybwmB217
CsGy3G007920	Cla004274	Watermelon (97103) v1	cgybwmB238
CsGy3G007920	Csa3G119420	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G007920	MELO3C019379	Melon (DHL92) v3.5.1	cgybmeB218
CsGy3G007920	MELO3C006008	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G007920	ClCG05G009100	Watermelon (Charleston Gray)	cgybwcgB221
CsGy3G007920	CSPI03G07780	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G007920	CmaCh08G001380	Cucurbita maxima (Rimu)	cgybcmaB464
CsGy3G007920	CmoCh08G001390	Cucurbita moschata (Rifu)	cgybcmoB430
CsGy3G007920	CmoCh14G021810	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G007920	Lsi05G021380	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G007920	Cp4.1LG03g15930	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G007920	Cp4.1LG17g10460	Cucurbita pepo (Zucchini)	cgybcpeB359
CsGy3G007920	MELO3C006008.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G007920	CsaV3_3G007900	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G007920	Cla97C05G091430	Watermelon (97103) v2	cgybwmbB214
CsGy3G007920	Cla97C01G000310	Watermelon (97103) v2	cgybwmbB166
CsGy3G007920	Cla97C05G080790	Watermelon (97103) v2	cgybwmbB196
CsGy3G007920	Bhi12G000577	Wax gourd	cgybwgoB249
CsGy3G007920	Bhi01G000371	Wax gourd	cgybwgoB272
CsGy3G007920	Bhi01G001132	Wax gourd	cgybwgoB282
CsGy3G007920	Carg25705	Silver-seed gourd	carcgybB0131

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G007920	Cucumber (Gy14) v2	cgybcgybB085
CsGy3G007920	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G007920	Cucurbita maxima (Rimu)	cgybcmaB401
CsGy3G007920	Cucurbita maxima (Rimu)	cgybcmaB430
CsGy3G007920	Cucurbita maxima (Rimu)	cgybcmaB443
CsGy3G007920	Cucurbita moschata (Rifu)	cgybcmoB372
CsGy3G007920	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G007920	Cucurbita pepo (Zucchini)	cgybcpeB428
CsGy3G007920	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G007920	Cucumber (Chinese Long) v2	cgybcuB125
CsGy3G007920	Bottle gourd (USVL1VR-Ls)	cgyblsiB137
CsGy3G007920	Melon (DHL92) v3.5.1	cgybmeB142
CsGy3G007920	Melon (DHL92) v3.6.1	cgybmedB139
CsGy3G007920	Watermelon (Charleston Gray)	cgybwcgB189
CsGy3G007920	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G007920	Watermelon (97103) v1	cgybwmB243
CsGy3G007920	Wild cucumber (PI 183967)	cgybcpiB126
CsGy3G007920	Silver-seed gourd	carcgybB0980
CsGy3G007920	Cucumber (Chinese Long) v3	cgybcucB130