Carg25705 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25705
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dof zinc finger protein
Location	Cucurbita_argyrosperma_scaffold_341 : 69397 .. 69915 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG

mRNA sequence

ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG

Coding sequence (CDS)

ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG

Protein sequence

MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW

Homology

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_022924713.1 (dof zinc finger protein 2-like [Cucurbita moschata])

HSP 1 Score: 310.8 bits (795), Expect = 2.8e-81
Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MEAMMQSXXXXXXXXXXXXXXXXXXXXRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQS      XXXXXXXXXXXXXXRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQS------XXXXXXXXXXXXXXRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 AXXXXAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
           AXXXXAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 AXXXXAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 166

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_023527390.1 (dof zinc finger protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.3 bits (713), Expect = 9.1e-72
Identity = 134/145 (92.41%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 31  EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPA 90
           EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP A
Sbjct: 27  EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPAA 86

Query: 91  SVTGSASANHAPPQQVYQAHDLNLGFPT---TTAXXXXAGIENGGHGGFGFYIPNLMPYP 150
           SVTGSASANHAPPQ VYQAHDLNLGFPT      XXXX   ENGGHGGFGFYIPNLMPYP
Sbjct: 87  SVTGSASANHAPPQPVYQAHDLNLGFPTXXXXXXXXXXXXXENGGHGGFGFYIPNLMPYP 146

Query: 151 ARDTAVEENPGSNGYWNGMFSGGPW 173
           ARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 147 ARDTAVEENPGSNGYWNGMFSGGPW 171

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_022980851.1 (dof zinc finger protein 2-like [Cucurbita maxima])

HSP 1 Score: 264.2 bits (674), Expect = 3.0e-67
Identity = 130/146 (89.04%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 31  EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPA 90
           EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP A
Sbjct: 30  EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPAA 89

Query: 91  SVTGSASANHAPPQQVYQAHDLNLGFPT----TTAXXXXAGIENGGHGGFGFYIPNLMPY 150
           SVTGSASANHA PQ VYQAHDLNLGFPT       XXXX      GHGGFGFYIPNLMPY
Sbjct: 90  SVTGSASANHA-PQPVYQAHDLNLGFPTXXXXXXXXXXXXXXXXXGHGGFGFYIPNLMPY 149

Query: 151 PARDTAVEENPGSNGYWNGMFSGGPW 173
           PARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 150 PARDTAVEENPGSNGYWNGMFSGGPW 174

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_011650669.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus] >KGN56409.1 hypothetical protein Csa_3G119420 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 2.2e-54
Identity = 108/146 (73.97%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK
Sbjct: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85

Query: 88  PPASVTG-SASANHAPPQQVYQAHDLNLGFPTTTAXXXXAGIENGGHGGFGFYIPNLMPY 147
           P  SV+G              QA DLNLGF TT        ++NGGHGGFG YIPNLMPY
Sbjct: 86  PHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTA--EATTAMDNGGHGGFGCYIPNLMPY 145

Query: 148 PARDT-AVEENPGSNGYWNGMFSGGP 172
             R+T AVEEN G+NGYWNGMF GGP
Sbjct: 146 SGRETAAVEENSGNNGYWNGMFGGGP 169

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_016898925.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 98/145 (67.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRK
Sbjct: 30  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNRK 89

Query: 88  PPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAXXXXAGIENGGHGGFGFYIPNLMPYP 147
           P  SV                          T        +ENGGHGGFG YIPNLMPY 
Sbjct: 90  PTGSVXXXXXXXXXXXXXXXXXXXXXXXXXXTA--EATTAMENGGHGGFGCYIPNLMPYS 149

Query: 148 ARDT-AVEENPGSNGYWNGMFSGGP 172
            R+T AVEEN G+NGYWNGMF GGP
Sbjct: 150 GRETAAVEENSGNNGYWNGMFGGGP 172

[Close]

BLAST of Carg25705 vs. TAIR10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 124.4 bits (311), Expect = 6.8e-29
Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQE  NCPRC S+NTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 88  PPASVTGSASANHAPPQQVYQAHDLNLGFPTTTA 122
            P   + ++S+    P       DLN  F  T++
Sbjct: 123 LPFPNSSTSSSTKNLP-------DLNPPFVFTSS 149

[Close]

BLAST of Carg25705 vs. TAIR10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQE++NCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++
Sbjct: 69  RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128

Query: 88  ---PPASVTGSASANHAPP 104
              P AS +     +  PP
Sbjct: 129 SSTPLASPSNPKLPDLNPP 147

[Close]

BLAST of Carg25705 vs. TAIR10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 117.5 bits (293), Expect = 8.3e-27
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 81
           RPQE+LNCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG
Sbjct: 75  RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

[Close]

BLAST of Carg25705 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 29  PQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP 88
           P+  L CPRC STNTKFCYYNNYSLTQPRYFCKSCRRYWT+GG+LRNIPVGGG RKN++ 
Sbjct: 51  PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRS 110

Query: 89  PASVTGSASANHAP 103
            +S   S      P
Sbjct: 111 TSSAARSLRTTPEP 124

[Close]

BLAST of Carg25705 vs. TAIR10
Match: AT3G21270.1 (DOF zinc finger protein 2)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 30 QEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 86
          QEQL CPRC S NTKFCYYNNY+L+QPR+FCKSCRRYWT+GG+LRN+PVGGGSRKN
Sbjct: 26 QEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81

[Close]

BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q9M161|DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQE  NCPRC S+NTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 88  PPASVTGSASANHAPPQQVYQAHDLNLGFPTTTA 122
            P   + ++S+    P       DLN  F  T++
Sbjct: 123 LPFPNSSTSSSTKNLP-------DLNPPFVFTSS 149

[Close]

BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q43385|DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQE++NCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++
Sbjct: 69  RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128

Query: 88  ---PPASVTGSASANHAPP 104
              P AS +     +  PP
Sbjct: 129 SSTPLASPSNPKLPDLNPP 147

[Close]

BLAST of Carg25705 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 65/139 (46.76%), Postives = 77/139 (55.40%), Query Frame = 0


Query: 28  RPQ--EQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 87
           RPQ  E L CPRC S NTKFCYYNNYS++QPRYFCK+CRRYWT GG+LRN+P+GGG RKN
Sbjct: 53  RPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKN 112

Query: 88  RKPPASVTG-----SASANHAPPQQVYQAHDLNLG------------FPTTTAXXXXAGI 143
           +     V G     S+SA +AP      A   N+              PT T       +
Sbjct: 113 KHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPTPTTMGLFPNV 172

[Close]

BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q9ZPY0|DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 81
           RPQE+LNCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG
Sbjct: 75  RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

[Close]

BLAST of Carg25705 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25
Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 29  PQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP 88
           P+  L CPRC STNTKFCYYNNYSLTQPRYFCKSCRRYWT+GG+LRNIPVGGG RKN++ 
Sbjct: 51  PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRS 110

Query: 89  PASVTGSASANHAP 103
            +S   S      P
Sbjct: 111 TSSAARSLRTTPEP 124

[Close]

BLAST of Carg25705 vs. TrEMBL
Match: tr|A0A0A0L5U8|A0A0A0L5U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54
Identity = 108/146 (73.97%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK
Sbjct: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85

Query: 88  PPASVTG-SASANHAPPQQVYQAHDLNLGFPTTTAXXXXAGIENGGHGGFGFYIPNLMPY 147
           P  SV+G              QA DLNLGF TT        ++NGGHGGFG YIPNLMPY
Sbjct: 86  PHGSVSGXXXXXXXXXXXXXXQAQDLNLGFATTA--EATTAMDNGGHGGFGCYIPNLMPY 145

Query: 148 PARDT-AVEENPGSNGYWNGMFSGGP 172
             R+T AVEEN G+NGYWNGMF GGP
Sbjct: 146 SGRETAAVEENSGNNGYWNGMFGGGP 169

[Close]

BLAST of Carg25705 vs. TrEMBL
Match: tr|A0A1S4DT96|A0A1S4DT96_CUCME (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 98/145 (67.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRK
Sbjct: 30  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNRK 89

Query: 88  PPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAXXXXAGIENGGHGGFGFYIPNLMPYP 147
           P  SV                          T        +ENGGHGGFG YIPNLMPY 
Sbjct: 90  PTGSVXXXXXXXXXXXXXXXXXXXXXXXXXXTA--EATTAMENGGHGGFGCYIPNLMPYS 149

Query: 148 ARDT-AVEENPGSNGYWNGMFSGGP 172
            R+T AVEEN G+NGYWNGMF GGP
Sbjct: 150 GRETAAVEENSGNNGYWNGMFGGGP 172

[Close]

BLAST of Carg25705 vs. TrEMBL
Match: tr|U5FT89|U5FT89_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G100900v3 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.2e-33
Identity = 85/211 (40.28%), Postives = 106/211 (50.24%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQEQLNCPRC STNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PVGGGSRKN++
Sbjct: 19  RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 78

Query: 88  PPASVTGSASA-------------NHAPPQQVYQAHDLNLGFPTTTAXXXXAGIENG-GH 147
             +S   ++S+             +   P+  ++  DLNL FP          + +G   
Sbjct: 79  STSSSVATSSSKLPDLNPPSLSHFSSQNPKSTHEGQDLNLAFPAMQDSQAMELLRSGFAS 138

Query: 148 GGFGFYIPNLMP----------YPARDT---------------AVEENP----------- 173
            G   +IP  MP          +P ++                 ++EN            
Sbjct: 139 RGLNTFIPTPMPDSNTLYSSGGFPLQELRPTLSFPADGLGSRYGIQENSGRLLFPFGELK 198

[Close]

BLAST of Carg25705 vs. TrEMBL
Match: tr|A0A0D2MKN3|A0A0D2MKN3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G076400 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.3e-31
Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 28  RPQEQ--LNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 87
           RPQ++  LNCPRC STNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKN
Sbjct: 35  RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKN 94

Query: 88  RKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAXXXXAGIENGGH--GGFGFYIPNL 147
           ++P +S +  + ++ +   +++Q  DLNL F TTT       +         F  +IP  
Sbjct: 95  KRPSSSFSSPSLSSSSKNPKIHQPQDLNLAFKTTTQGYTCGNVPELVQIPNSFSSFIPMP 154

[Close]

BLAST of Carg25705 vs. TrEMBL
Match: tr|V7BQJ6|V7BQJ6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G114900g PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30
Identity = 69/100 (69.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQEQLNCPRC STNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 19  RPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKK 78

Query: 88  ----------PPASVTGSASANHAPPQQVYQAHDLNLGFP 118
                     PP+  + SA ++  P  Q    HDLNL FP
Sbjct: 79  ATSSKVPDLNPPSLSSVSAISSQNPKMQ--GVHDLNLAFP 116

The following BLAST results are available for this feature:

BLAST of Carg25705 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924713.1	2.8e-81	96.51	dof zinc finger protein 2-like [Cucurbita moschata]	[more]
XP_023527390.1	9.1e-72	92.41	dof zinc finger protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022980851.1	3.0e-67	89.04	dof zinc finger protein 2-like [Cucurbita maxima]	[more]
XP_011650669.1	2.2e-54	73.97	PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus] >KGN56409.1 hypothet...	[more]
XP_016898925.1	2.4e-48	67.59	PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo]	[more]

BLAST of Carg25705 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00940.1	6.8e-29	63.83	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	1.2e-28	72.15	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	8.3e-27	92.45	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	1.1e-26	70.27	TARGET OF MONOPTEROS 6	[more]
AT3G21270.1	1.6e-25	83.93	DOF zinc finger protein 2	[more]

BLAST of Carg25705 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M161\|DOF41_ARATH	1.2e-27	63.83	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]
sp\|Q43385\|DOF37_ARATH	2.1e-27	72.15	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
sp\|O24463\|PBF_MAIZE	1.1e-25	46.76	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
sp\|Q9ZPY0\|DOF25_ARATH	1.5e-25	92.45	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
sp\|Q84TE9\|DOF53_ARATH	2.0e-25	70.27	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]

BLAST of Carg25705 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5U8\|A0A0A0L5U8_CUCSA	1.5e-54	73.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1	[more]
tr\|A0A1S4DT96\|A0A1S4DT96_CUCME	1.6e-48	67.59	dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1	[more]
tr\|U5FT89\|U5FT89_POPTR	4.2e-33	40.28	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G100900v3 PE=...	[more]
tr\|A0A0D2MKN3\|A0A0D2MKN3_GOSRA	2.3e-31	56.45	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G076400 PE=4 ...	[more]
tr\|V7BQJ6\|V7BQJ6_PHAVU	2.0e-30	69.00	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G114900g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003851	Znf_Dof

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25705-RA	Carg25705-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 31..87 e-value: 2.3E-33 score: 114.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 35..71
IPR003851	Zinc finger, Dof-type	PRODOM	PD007478		coord: 28..87 e-value: 6.0E-26 score: 289.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 33..87 score: 28.938
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..101
None	No IPR available	PANTHER	PTHR31992	FAMILY NOT NAMED	coord: 26..105

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25705	Cla021140	Watermelon (97103) v1	carwmB0122
Carg25705	Csa3G119420	Cucumber (Chinese Long) v2	carcuB0132
Carg25705	MELO3C006008	Melon (DHL92) v3.5.1	carmeB0128
Carg25705	CSPI03G07780	Wild cucumber (PI 183967)	carcpiB0137
Carg25705	Cucsa.259380	Cucumber (Gy14) v1	carcgyB0148
Carg25705	CmoCh14G021810	Cucurbita moschata (Rifu)	carcmoB0170
Carg25705	Lsi05G021380	Bottle gourd (USVL1VR-Ls)	carlsiB110
Carg25705	Cp4.1LG03g15930	Cucurbita pepo (Zucchini)	carcpeB0179
Carg25705	CsGy3G007920	Cucumber (Gy14) v2	carcgybB0131
Carg25705	MELO3C006008.2	Melon (DHL92) v3.6.1	carmedB0132
Carg25705	CsaV3_3G007900	Cucumber (Chinese Long) v3	carcucB0141
Carg25705	Cla97C05G080790	Watermelon (97103) v2	carwmbB0130
Carg25705	Bhi12G000577	Wax gourd	carwgoB0152
Carg25705	Bhi01G000371	Wax gourd	carwgoB0153

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25705	Silver-seed gourd	carcarB146
Carg25705	Cucurbita maxima (Rimu)	carcmaB0162
Carg25705	Cucurbita maxima (Rimu)	carcmaB0164
Carg25705	Cucurbita moschata (Rifu)	carcmoB0171
Carg25705	Cucurbita pepo (Zucchini)	carcpeB0180
Carg25705	Watermelon (Charleston Gray)	carwcgB0122