Cucsa.259380 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.259380
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDof zinc finger protein
Locationscaffold02229 : 5908242 .. 5908753 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGATGATGGAGTCCGGCGCCAACGGCGGGGGAGGAGGAGGCGGCGGTGGAGGgTTGAAGGGAAAAGGAAGGCCACAAGAGCAATTGAACTGCCCAAGATGCAAATCAAGCAACACAAAATTTTGTTACTACAACAATTATAGTCTCACACAGCCGAGGTATTTTTGCAAATCCTGCCGCCGGTATTGGACGGAGGGTGGTTCTCTTAGGAATATTCCCGTCGGAGGAGGGTCCAGGAAGAACAGGAAACCGCaCGGTtCGGTTTCTGGGTCTGGTTCGGTTCACCACCCTCAGCCGCAGCCGCAGGTGTATCAAGCGCAGGATCTGAACTTGGGGTTTGCAACGACGGCGGAGGCTACGACGGCGATGGACAACGGCGGGCATGGAGGGTTTGGTTGTTATATTCCGAATTTGATGCCGTATTCGGGACGTGAGACGGCGGCGGTGGAAGAGAATTCCGGTAATAATGGGTATTGGAATGGGATGTTTGGTGGAGGGCCGCCGTG

mRNA sequence

ATGGAGGCGATGATGGAGTCCGGCGCCAACGGCGGGGGAGGAGGAGGCGGCGGTGGAGGGTTGAAGGGAAAAGGAAGGCCACAAGAGCAATTGAACTGCCCAAGATGCAAATCAAGCAACACAAAATTTTGTTACTACAACAATTATAGTCTCACACAGCCGAGGTATTTTTGCAAATCCTGCCGCCGGTATTGGACGGAGGGTGGTTCTCTTAGGAATATTCCCGTCGGAGGAGGGTCCAGGAAGAACAGGAAACCGCACGGTTCGGTTTCTGGGTCTGGTTCGGTTCACCACCCTCAGCCGCAGCCGCAGGTGTATCAAGCGCAGGATCTGAACTTGGGGTTTGCAACGACGGCGGAGGCTACGACGGCGATGGACAACGGCGGGCATGGAGGGTTTGGTTGTTATATTCCGAATTTGATGCCGTATTCGGGACGTGAGACGGCGGCGGTGGAAGAGAATTCCGGTAATAATGGGTATTGGAATGGGATGTTTGGTGGAGGGCCGCCGTG

Coding sequence (CDS)

ATGGAGGCGATGATGGAGTCCGGCGCCAACGGCGGGGGAGGAGGAGGCGGCGGTGGAGGgTTGAAGGGAAAAGGAAGGCCACAAGAGCAATTGAACTGCCCAAGATGCAAATCAAGCAACACAAAATTTTGTTACTACAACAATTATAGTCTCACACAGCCGAGGTATTTTTGCAAATCCTGCCGCCGGTATTGGACGGAGGGTGGTTCTCTTAGGAATATTCCCGTCGGAGGAGGGTCCAGGAAGAACAGGAAACCGCaCGGTtCGGTTTCTGGGTCTGGTTCGGTTCACCACCCTCAGCCGCAGCCGCAGGTGTATCAAGCGCAGGATCTGAACTTGGGGTTTGCAACGACGGCGGAGGCTACGACGGCGATGGACAACGGCGGGCATGGAGGGTTTGGTTGTTATATTCCGAATTTGATGCCGTATTCGGGACGTGAGACGGCGGCGGTGGAAGAGAATTCCGGTAATAATGGGTATTGGAATGGGATGTTTGGTGGAGGGCCGCCGTG

Protein sequence

MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAEATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPPX
Homology
[Close]
BLAST of Cucsa.259380 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 1 

Query: 18  GGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVG 77
           GG  K +    + +NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVG
Sbjct: 40  GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

Query: 78  GGSRKNRKPHGSVSGSGSVHHPQPQP 104
           GGSRKN++ H S S   + H    QP
Sbjct: 100 GGSRKNKRSHSSSSDISNNHSDSTQP 125

[Close]
BLAST of Cucsa.259380 vs. Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 59/102 (57.84%), Postives = 71/102 (69.61%), Query Frame = 1 

Query: 7   SGANGGGGGGGGGGLK---GKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRR 66
           + +NGG GG           K RPQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRR
Sbjct: 47  TASNGGSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRR 106

Query: 67  YWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQV 106
           YWTEGGSLRN+PVGG SRKN++    ++   +   P   P +
Sbjct: 107 YWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPI 148


HSP 2 Score: 29.6 bits (65), Expect = 4.0e+01
Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 1 

Query: 140 LMPYSGRE---TAAVEENSGNNGYWNGMF 166
           L P+S  +   +   E++ GNN YWNGMF
Sbjct: 260 LFPFSDMKELSSTTQEKSHGNNTYWNGMF 288

[Close]
BLAST of Cucsa.259380 vs. Swiss-Prot
Match: DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 9.8e-30
Identity = 66/122 (54.10%), Postives = 74/122 (60.66%), Query Frame = 1 

Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQE  NCPRC SSNTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 86  ---PHGSVSGS--------------GSVHHPQPQPQVYQAQDLNLGFATTAEATTAMDNG 131
              P+ S S S               S     P        DL+L F++  +   A  + 
Sbjct: 123 LPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQGHY 182

[Close]
BLAST of Cucsa.259380 vs. Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 24  KGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 83
           K RPQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 84  RKPHGSVSGS 94
           ++   S S +
Sbjct: 133 KRSSSSSSSN 142

[Close]
BLAST of Cucsa.259380 vs. Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28
Identity = 55/89 (61.80%), Postives = 69/89 (77.53%), Query Frame = 1 

Query: 7   SGANGGGGGGGG----GGLKGKGR------PQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 66
           +G+ GGGGGGGG    G +  + R      P+  L CPRC+S+NTKFCY+NNYSLTQPR+
Sbjct: 55  NGSGGGGGGGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRH 114

Query: 67  FCKSCRRYWTEGGSLRNIPVGGGSRKNRK 86
           FCK+CRRYWT GG+LRN+PVGGG R+NR+
Sbjct: 115 FCKTCRRYWTRGGALRNVPVGGGCRRNRR 143

[Close]
BLAST of Cucsa.259380 vs. TrEMBL
Match: A0A0A0L5U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119420 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 9.7e-101
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60
           MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAE 120
           CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAE
Sbjct: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAE 120

Query: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP 171
           ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP
Sbjct: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP 170

[Close]
BLAST of Cucsa.259380 vs. TrEMBL
Match: A0A0D2MKN3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G076400 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-33
Identity = 70/105 (66.67%), Postives = 83/105 (79.05%), Query Frame = 1 

Query: 21  LKGKGRPQEQ--LNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 80
           L+ + RPQ++  LNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGG
Sbjct: 30  LERRTRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 89

Query: 81  GSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAEATT 124
           GSRKN++P  S S S S+      P+++Q QDLNL F TT +  T
Sbjct: 90  GSRKNKRPSSSFS-SPSLSSSSKNPKIHQPQDLNLAFKTTTQGYT 133

[Close]
BLAST of Cucsa.259380 vs. TrEMBL
Match: A0A0D9VJE8_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-32
Identity = 83/174 (47.70%), Postives = 100/174 (57.47%), Query Frame = 1 

Query: 12  GGGGGGGGGLKGKGRPQEQ--LNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGG 71
           G G G G G + + RPQ++  LNCPRC S+NTKFCYYNNYSL QPRYFCK+CRRYWTEGG
Sbjct: 62  GAGAGAGAGTERRTRPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGG 121

Query: 72  SLRNIPVGGGSRKNRKPHG-----------SVSGSGSVHHPQPQPQVYQ----AQDLNLG 131
           SLRN+PVGGGSRKN++              SVSG+ SV      P++        DLNL 
Sbjct: 122 SLRNVPVGGGSRKNKRSSSSVVVSSAAAATSVSGTVSVGLANKNPKLMHEGGAQADLNLA 181

Query: 132 FATTAEATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGG 169
           F           +GG GG G   P    +   E+++V  N   NG   G  GGG
Sbjct: 182 F-------PHHHHGGGGGRGLQPPEFAAFPSLESSSVCNNLAANG---GRGGGG 225

[Close]
BLAST of Cucsa.259380 vs. TrEMBL
Match: U5FT89_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-32
Identity = 75/143 (52.45%), Postives = 90/143 (62.94%), Query Frame = 1 

Query: 17  GGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPV 76
           G  G++ K RPQEQLNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PV
Sbjct: 10  GRPGVERKPRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPV 69

Query: 77  GGGSRKNRKPHGSVSGSGSVHHPQPQP------------QVYQAQDLNLGFAT--TAEAT 136
           GGGSRKN++   S   + S   P   P              ++ QDLNL F     ++A 
Sbjct: 70  GGGSRKNKRSTSSSVATSSSKLPDLNPPSLSHFSSQNPKSTHEGQDLNLAFPAMQDSQAM 129

Query: 137 TAMDNG-GHGGFGCYIPNLMPYS 145
             + +G    G   +IP  MP S
Sbjct: 130 ELLRSGFASRGLNTFIPTPMPDS 152

[Close]
BLAST of Cucsa.259380 vs. TrEMBL
Match: U5FT89_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.5e-32
Identity = 92/219 (42.01%), Postives = 110/219 (50.23%), Query Frame = 1 

Query: 17  GGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPV 76
           G  G++ K RPQEQLNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PV
Sbjct: 10  GRPGVERKPRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPV 69

Query: 77  GGGSRKNRKP---------------------HGSVSGSGSVHHPQ------PQPQVYQAQ 136
           GGGSRKN++                      H S     S H  Q      P  Q  QA 
Sbjct: 70  GGGSRKNKRSTSSSVATSSSKLPDLNPPSLSHFSSQNPKSTHEGQDLNLAFPAMQDSQAM 129

Query: 137 DL-NLGFATTA----------EATTAMDNGGH-------------GGFGCYIPNLMPYSG 169
           +L   GFA+            ++ T   +GG               G G     +   SG
Sbjct: 130 ELLRSGFASRGLNTFIPTPMPDSNTLYSSGGFPLQELRPTLSFPADGLGSRY-GIQENSG 189


HSP 2 Score: 143.7 bits (361), Expect = 2.1e-31
Identity = 69/111 (62.16%), Postives = 80/111 (72.07%), Query Frame = 1 

Query: 20  GLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGG 79
           GL+ K RPQEQ+NCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PVGGG
Sbjct: 13  GLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGG 72

Query: 80  SRKNRK-------PHGSVSGSGSVHHPQPQ--------PQVYQAQDLNLGF 116
           SRKN+K       P+ S S    ++ P  Q        P++   QDLNL F
Sbjct: 73  SRKNKKIPSSLANPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAF 123

[Close]
BLAST of Cucsa.259380 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 134.0 bits (336), Expect = 8.5e-32
Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 1 

Query: 18  GGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVG 77
           GG  K +    + +NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVG
Sbjct: 40  GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

Query: 78  GGSRKNRKPHGSVSGSGSVHHPQPQP 104
           GGSRKN++ H S S   + H    QP
Sbjct: 100 GGSRKNKRSHSSSSDISNNHSDSTQP 125

[Close]
BLAST of Cucsa.259380 vs. TAIR10
Match: AT3G61850.4 (AT3G61850.4 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31
Identity = 59/102 (57.84%), Postives = 71/102 (69.61%), Query Frame = 1 

Query: 7   SGANGGGGGGGGGGLK---GKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRR 66
           + +NGG GG           K RPQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRR
Sbjct: 47  TASNGGSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRR 106

Query: 67  YWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQV 106
           YWTEGGSLRN+PVGG SRKN++    ++   +   P   P +
Sbjct: 107 YWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPI 148


HSP 2 Score: 29.6 bits (65), Expect = 2.3e+00
Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 1 

Query: 140 LMPYSGRE---TAAVEENSGNNGYWNGMF 166
           L P+S  +   +   E++ GNN YWNGMF
Sbjct: 288 LFPFSDMKELSSTTQEKSHGNNTYWNGMF 316

[Close]
BLAST of Cucsa.259380 vs. TAIR10
Match: AT4G00940.1 (AT4G00940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.5e-31
Identity = 66/122 (54.10%), Postives = 74/122 (60.66%), Query Frame = 1 

Query: 26  RPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 85
           RPQE  NCPRC SSNTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 86  ---PHGSVSGS--------------GSVHHPQPQPQVYQAQDLNLGFATTAEATTAMDNG 131
              P+ S S S               S     P        DL+L F++  +   A  + 
Sbjct: 123 LPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQGHY 182

[Close]
BLAST of Cucsa.259380 vs. TAIR10
Match: AT2G46590.2 (AT2G46590.2 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 130.6 bits (327), Expect = 9.4e-31
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 24  KGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 83
           K RPQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 84  RKPHGSVSGS 94
           ++   S S +
Sbjct: 133 KRSSSSSSSN 142

[Close]
BLAST of Cucsa.259380 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-29
Identity = 55/89 (61.80%), Postives = 69/89 (77.53%), Query Frame = 1 

Query: 7   SGANGGGGGGGG----GGLKGKGR------PQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 66
           +G+ GGGGGGGG    G +  + R      P+  L CPRC+S+NTKFCY+NNYSLTQPR+
Sbjct: 55  NGSGGGGGGGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRH 114

Query: 67  FCKSCRRYWTEGGSLRNIPVGGGSRKNRK 86
           FCK+CRRYWT GG+LRN+PVGGG R+NR+
Sbjct: 115 FCKTCRRYWTRGGALRNVPVGGGCRRNRR 143

[Close]
BLAST of Cucsa.259380 vs. NCBI nr
Match: gi|778676830|ref|XP_011650669.1| (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.4e-100
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60
           MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAE 120
           CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAE
Sbjct: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAE 120

Query: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP 171
           ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP
Sbjct: 121 ATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP 170

[Close]
BLAST of Cucsa.259380 vs. NCBI nr
Match: gi|659074919|ref|XP_008437866.1| (PREDICTED: dof zinc finger protein DOF3.7-like [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 1.9e-94
Identity = 165/174 (94.83%), Postives = 167/174 (95.98%), Query Frame = 1 

Query: 1   MEAMMESGANGGG----GGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60
           MEAMMESG NGGG    GGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY
Sbjct: 1   MEAMMESGGNGGGGGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60

Query: 61  FCKSCRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFA 120
           FCK+CRRYWTEGGSLRNIPVGGGSRKNRKP GSVSGSGSVHHPQPQPQVYQAQDLNLGFA
Sbjct: 61  FCKACRRYWTEGGSLRNIPVGGGSRKNRKPTGSVSGSGSVHHPQPQPQVYQAQDLNLGFA 120

Query: 121 TTAEATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP 171
            TAEATTAM+NGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP
Sbjct: 121 -TAEATTAMENGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGPP 173

[Close]
BLAST of Cucsa.259380 vs. NCBI nr
Match: gi|823141178|ref|XP_012470407.1| (PREDICTED: dof zinc finger protein DOF1.8 isoform X2 [Gossypium raimondii])

HSP 1 Score: 156.4 bits (394), Expect = 4.5e-35
Identity = 86/190 (45.26%), Postives = 106/190 (55.79%), Query Frame = 1 

Query: 21  LKGKGRPQEQ--LNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 80
           L+ + RPQ++  LNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGG
Sbjct: 30  LERRTRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 89

Query: 81  GSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAEATT--------------- 140
           GSRKN++P  S S S S+      P+++Q QDLNL F TT +  T               
Sbjct: 90  GSRKNKRPSSSFS-SPSLSSSSKNPKIHQPQDLNLAFKTTTQGYTCVPDPNTVYTSGLIP 149

Query: 141 ----------AMDNGGHGGFGCYIPNLMPYSGR---------------ETAAVEENSGNN 169
                     ++D  G G +G         +GR               +T   +E   + 
Sbjct: 150 MQDFKPILNFSLDGLGSGHYGSLQGVQETTTGRFLFPFEDLKQVPNTTDTDQNKEQGDST 209

[Close]
BLAST of Cucsa.259380 vs. NCBI nr
Match: gi|743790303|ref|XP_011038563.1| (PREDICTED: dof zinc finger protein DOF3.7-like isoform X4 [Populus euphratica])

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 88/211 (41.71%), Postives = 105/211 (49.76%), Query Frame = 1 

Query: 24  KGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 83
           K RPQEQLNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRN+PVGGGSRKN
Sbjct: 34  KPRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 93

Query: 84  RKPHGSVSGSGSVHHPQPQP------------QVYQAQDLNLGFAT--TAEATTAMDNG- 143
           ++   S   + S   P   P              ++ QDLNL F     ++A   + +G 
Sbjct: 94  KRSTSSSVAASSSKIPDLNPPSLPHFSSQNPKSTHEGQDLNLAFPAMQDSQAMELLRSGF 153

Query: 144 GHGGFGCYIPNLMPYSG------------------------RETAAVEENSG-------- 169
              G   +IP  MP S                         R    ++ENSG        
Sbjct: 154 ASRGLNTFIPTPMPDSNTLYSSGGLPLQELKPTLSFAADGLRSRYGIQENSGRLLFPLGE 213

[Close]
BLAST of Cucsa.259380 vs. NCBI nr
Match: gi|823141176|ref|XP_012470406.1| (PREDICTED: dof zinc finger protein DOF4.6 isoform X1 [Gossypium raimondii])

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-33
Identity = 70/105 (66.67%), Postives = 83/105 (79.05%), Query Frame = 1 

Query: 21  LKGKGRPQEQ--LNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 80
           L+ + RPQ++  LNCPRC S+NTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGG
Sbjct: 30  LERRTRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 89

Query: 81  GSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATTAEATT 124
           GSRKN++P  S S S S+      P+++Q QDLNL F TT +  T
Sbjct: 90  GSRKNKRPSSSFS-SPSLSSSSKNPKIHQPQDLNLAFKTTTQGYT 133

The following BLAST results are available for this feature:
BLAST of Cucsa.259380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF46_ARATH1.5e-3067.44Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
DOF37_ARATH3.4e-3057.84Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2[more]
DOF41_ARATH9.8e-3054.10Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2[more]
DOF25_ARATH1.7e-2978.57Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3[more]
DOF24_ARATH2.4e-2861.80Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1[more]
BLAST of Cucsa.259380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5U8_CUCSA9.7e-101100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119420 PE=4 SV=1[more]
A0A0D2MKN3_GOSRA2.3e-3366.67Uncharacterized protein OS=Gossypium raimondii GN=B456_003G076400 PE=4 SV=1[more]
A0A0D9VJE8_9ORYZ1.9e-3247.70Uncharacterized protein OS=Leersia perrieri PE=4 SV=1[more]
U5FT89_POPTR3.3e-3252.45Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1[more]
U5FT89_POPTR9.5e-3242.01Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1[more]
BLAST of Cucsa.259380 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24060.18.5e-3267.44 Dof-type zinc finger DNA-binding family protein[more]
AT3G61850.41.9e-3157.84 Dof-type zinc finger DNA-binding family protein[more]
AT4G00940.15.5e-3154.10 Dof-type zinc finger DNA-binding family protein[more]
AT2G46590.29.4e-3178.57 Dof-type zinc finger DNA-binding family protein[more]
AT2G37590.11.4e-2961.80 DNA binding with one finger 2.4[more]
BLAST of Cucsa.259380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676830|ref|XP_011650669.1|1.4e-100100.00PREDICTED: dof zinc finger protein DOF3.7 [Cucumis sativus][more]
gi|659074919|ref|XP_008437866.1|1.9e-9494.83PREDICTED: dof zinc finger protein DOF3.7-like [Cucumis melo][more]
gi|823141178|ref|XP_012470407.1|4.5e-3545.26PREDICTED: dof zinc finger protein DOF1.8 isoform X2 [Gossypium raimondii][more]
gi|743790303|ref|XP_011038563.1|1.1e-3341.71PREDICTED: dof zinc finger protein DOF3.7-like isoform X4 [Populus euphratica][more]
gi|823141176|ref|XP_012470406.1|3.3e-3366.67PREDICTED: dof zinc finger protein DOF4.6 isoform X1 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.259380.1Cucsa.259380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 26..85
score: 1.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 29..85
score: 2.7
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 33..69
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 31..85
score: 28
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 24..105
score: 1.8
NoneNo IPR availablePANTHERPTHR31992:SF25SUBFAMILY NOT NAMEDcoord: 24..105
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.259380Cla021140Watermelon (97103) v1cgywmB479
Cucsa.259380Cla004274Watermelon (97103) v1cgywmB477
Cucsa.259380Csa3G119420Cucumber (Chinese Long) v2cgycuB366
Cucsa.259380MELO3C019379Melon (DHL92) v3.5.1cgymeB438
Cucsa.259380MELO3C006008Melon (DHL92) v3.5.1cgymeB439
Cucsa.259380ClCG05G009100Watermelon (Charleston Gray)cgywcgB449
Cucsa.259380CSPI03G07780Wild cucumber (PI 183967)cgycpiB383
Cucsa.259380CmoCh15G010790Cucurbita moschata (Rifu)cgycmoB0703
Cucsa.259380CmoCh14G021810Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.259380Lsi09G000090Bottle gourd (USVL1VR-Ls)cgylsiB413
Cucsa.259380Lsi05G021380Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.259380Cp4.1LG03g15930Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.259380MELO3C006008.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.259380CsaV3_3G007900Cucumber (Chinese Long) v3cgycucB387
Cucsa.259380Cla97C05G091430Watermelon (97103) v2cgywmbB450
Cucsa.259380Cla97C01G000310Watermelon (97103) v2cgywmbB445
Cucsa.259380Cla97C05G080790Watermelon (97103) v2cgywmbB452
Cucsa.259380Bhi12G000577Wax gourdcgywgoB507
Cucsa.259380Bhi01G000371Wax gourdcgywgoB514
Cucsa.259380Bhi01G001132Wax gourdcgywgoB519
Cucsa.259380Carg25705Silver-seed gourdcarcgyB0148
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.259380Melon (DHL92) v3.6.1cgymedB420
Cucsa.259380Silver-seed gourdcarcgyB1110
Cucsa.259380Cucumber (Chinese Long) v3cgycucB393
Cucsa.259380Cucumber (Gy14) v1cgycgyB116
Cucsa.259380Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.259380Cucurbita maxima (Rimu)cgycmaB0725
Cucsa.259380Cucurbita maxima (Rimu)cgycmaB0728
Cucsa.259380Cucurbita moschata (Rifu)cgycmoB0712
Cucsa.259380Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.259380Wild cucumber (PI 183967)cgycpiB387
Cucsa.259380Cucumber (Chinese Long) v2cgycuB369
Cucsa.259380Melon (DHL92) v3.5.1cgymeB426
Cucsa.259380Watermelon (Charleston Gray)cgywcgB446
Cucsa.259380Watermelon (Charleston Gray)cgywcgB451
Cucsa.259380Watermelon (97103) v1cgywmB481
Cucsa.259380Cucurbita pepo (Zucchini)cgycpeB0685
Cucsa.259380Cucurbita pepo (Zucchini)cgycpeB0687