Cp4.1LG17g10790 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGTATTCACCGATGTAAAGAGGCCCGCTACGGTGGTGGGAATGGCGGCATGGGCGGCGGCGATAATATTCATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGAGAATGTGAGGATCTAGGTTTCACTGGCCTCGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGGTGATGCGCTCGATTCACAGATCACACGGTTTTCCGAACGCATGATTGATTCGGTTTTGAATTTATTTCTGGATTACTACATCTCCATTTTTCGTGGATTTTATCGTGAATTCGCAGCAGCGTAATGGATTTTGTTCGTTTGTTTTCTCAATTCTCCGCGTTTCTTTTTCTTTTGAACGATTGATTGTTCGCCTTGTGGTTGATTTCGATTATGGATTTCTATTGCTTGATTTGGATTTTGGAAACAGGAAATAGGTTGCAAGATGTTGAGTTAAAATAGCCTGTTGCCTTTTAGCATCATAGTTAAACAACGTGCGAGTTTATAATTGAGTTATGCAGAAAAATTTGAAAAAATGTTATAATACCAAATGACAATTCTGGCAACACTGGATTTGTGAAGGCTACATTATGAGTTCCAATAGTCTTTATCCAAAATCCAAATGAAGAAAATAACTGATAGTACTCTGAATCTGCAGTTGTCTCGTGTCAGTTTATGTAATGCAATAGTTTTGAAGTGCATTGTTCTTAAAATTACATGCTGTACTCATTTCCAAAGTTGTTCTGCAGAATTAGTGGCAGACTGTTTGAAGTGTTGCACGGAGGATTCTGATGATGCCACGAGTAAGGTACACAAAATTTTATAGATGTGCTGATATCTCGAGTGTAAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAGTCTCTCCCTAGCAGACGCGTTTAAAAACTTTGAGGGGAATCCTGAAAGGGAAAGCCCAAAGAGGACAGTATCTACTAGAGGTGGGCTTAGATTGTTACGTCGAGACTGAATTTGATTTGCTATTCCATTGTGAATAGTGTATTGTCCATGTGGTCGACATATCGGTTGAAAACACATTAATTTAACATAGTATGCAGGATTAACAATTTTTGCCTCCATGAAATTATAAAAATTGTGGTTCTAAATAAGGTTTCAGTAAACAATATCTACTAGAGGTGTACGAGAGGTGTCATAGTGATCAATTCTAAAGGAATTAGACGACTCTATGTAACAACTCAAACCCACCTCTAGCAGATATTGTCCTTTTTGGGCTTTCTCTTTCGGGCTTCCCTTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTAAAAAGAATATTTCATTTCTCTCTCCAACCGATGTGGGATCTCACAATCCCCCCCTTCAGGGACCAGCATCCTCGCTGGTACTTGTTCCCCTCTTCTATTGATGTGCGACCCCCCAATATCAACTAGCGGTGGGTTTGGACTGTTACACTCTATTTGGTCAAATACCTTGCAACATACTCCCACTTTTTTCGATTACAGTATCTCAAAACAAATTTCTGGTTCCAAAATTTTTGTCCACCATGGTTGCTGTTTAACTAAACAAAGGATGAAAGCCAATTAACTAAATTCGTTAACTGCAGATAACTTATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATAAATTCCCTTCTGTTAAGATTCAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGTAACTTCTAAGTGCCTAAAATTTTCCACTATAATACTTATGGAGAGACCCTGTTAAGGTCGTGAATGTTGATGTTTCTTTCTTATGAGAATCAAACTTGTAATAAGGTACAAAAGAATACAAAAGAAATGCTTAAACAAAAAAGCGAAACTAGAGATTGAAAGAAGAGCTCTAATCATTAAGAATAAGAGATAAGAAATGGTTACAAATACATTTGGAGTTAGATAGACCCTCGAAGAGGGAGATTAAATCTAGCCAAAAGTCGCATCTCCCTACAAGATGTTCCACTTTATGCCCCTAAAACTCTCTAATTTCTGTTGTAAATGTTGATGTTTGCCCTACTAAACGACTTGTTATCTCGTCTAGAAGAACGCTTGCAAGCATCCATAACATAGAGTTCATATGATATCTTTTAGATCAAAATCATGGAGAATATGTGTAGGTTAAGATGGTGTACATAGATATAAATTTTGCTTTAGCTTCTGGTTAATGACCATTTATAATTGATATGTCACAAAAGATGACATAAGAAGTTTTTTTTCTTTTTACGTTTTTTTCCCCTTTTTTTCAGGATTGATAACTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGATAAGGTTAAGCTATCTTCAGCAATTTAAGGTTCTCATCTTCCTTGTTTCTTTAATATCCCTGTAAAAAACTCTAAAGTCTATTGTTATATTGTAGTTTTCTTTGATACTGCAATATGTTAGTATCTTATGTTTTGTGTTTTGGTAAATTTTATGTTTAATTTCACAAACTCTTTCAAGCACTTTGAACTTCAAAATGAAGAAGGAAAAGAAAAGGGAAAAATGACAATAATGTTTGAGAATTCGAATGAACTGATATCCAAATAGATGTGTTGAATTGTACAAACACAACACGCTCTAGAAGTATACAAAGATAAACAGCAACTCTACCGAGTTAAAGGCTTTGAGTGCTTCTTCAAAAAAATGTTGAGCCACTCTAGGAGGTCTATTCTTATGTACATTTGGCTCAACTCAATGAATATTGATAGAATGTTTGA ATGCAGGTATTCACCGATGTAAAGAGGCCCGCTACGGTGGTGGGAATGGCGGCATGGGCGGCGGCGATAATATTCATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGAGAATGTGAGGATCTAGGTTTCACTGGCCTCGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGGTGATGCGCTCGATTCACAGATCACACGGTTTTCCGAACGCATGATTGATTCGATAACTTATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATAAATTCCCTTCTGTTAAGATTCAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATTGATAACTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGATAAGAATGTTTGA ATGCAGGTATTCACCGATGTAAAGAGGCCCGCTACGGTGGTGGGAATGGCGGCATGGGCGGCGGCGATAATATTCATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGAGAATGTGAGGATCTAGGTTTCACTGGCCTCGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGGTGATGCGCTCGATTCACAGATCACACGGTTTTCCGAACGCATGATTGATTCGATAACTTATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATAAATTCCCTTCTGTTAAGATTCAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATTGATAACTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGATAAGAATGTTTGA MQVFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQGDALDSQITRFSERMIDSITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKNV
BLAST of Cp4.1LG17g10790 vs. Swiss-Prot
Match: SEP15_DANRE (15 kDa selenoprotein OS=Danio rerio GN=sep15 PE=2 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 9.1e-17 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. Swiss-Prot
Match: SEP15_BOVIN (15 kDa selenoprotein OS=Bos taurus GN=SEP15 PE=2 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. Swiss-Prot
Match: SEP15_HUMAN (15 kDa selenoprotein OS=Homo sapiens GN=SEP15 PE=1 SV=3) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. Swiss-Prot
Match: SEP15_RAT (15 kDa selenoprotein OS=Rattus norvegicus GN=Sep15 PE=1 SV=3) HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. Swiss-Prot
Match: SEP15_PIG (15 kDa selenoprotein OS=Sus scrofa GN=SEP15 PE=2 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. TrEMBL
Match: A0A0A0KA30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087180 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 6.1e-60 Identity = 121/164 (73.78%), Postives = 131/164 (79.88%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. TrEMBL
Match: B9IQU6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12540g PE=4 SV=2) HSP 1 Score: 215.3 bits (547), Expect = 5.5e-53 Identity = 104/147 (70.75%), Postives = 121/147 (82.31%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. TrEMBL
Match: A0A067LJ32_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05711 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52 Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. TrEMBL
Match: M5Y5K8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012718mg PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.4e-51 Identity = 103/145 (71.03%), Postives = 119/145 (82.07%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. TrEMBL
Match: A0A067FCX2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031251mg PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.8e-51 Identity = 102/145 (70.34%), Postives = 117/145 (80.69%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. TAIR10
Match: AT1G05720.1 (AT1G05720.1 selenoprotein family protein) HSP 1 Score: 203.0 bits (515), Expect = 1.4e-52 Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. NCBI nr
Match: gi|659120099|ref|XP_008460012.1| (PREDICTED: 15 kDa selenoprotein [Cucumis melo]) HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62 Identity = 126/164 (76.83%), Postives = 134/164 (81.71%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. NCBI nr
Match: gi|449445674|ref|XP_004140597.1| (PREDICTED: 15 kDa selenoprotein [Cucumis sativus]) HSP 1 Score: 238.4 bits (607), Expect = 8.7e-60 Identity = 121/164 (73.78%), Postives = 131/164 (79.88%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. NCBI nr
Match: gi|743917732|ref|XP_011002858.1| (PREDICTED: 15 kDa selenoprotein-like [Populus euphratica]) HSP 1 Score: 215.3 bits (547), Expect = 7.9e-53 Identity = 104/147 (70.75%), Postives = 122/147 (82.99%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. NCBI nr
Match: gi|566242499|ref|XP_002326051.2| (hypothetical protein POPTR_0019s12540g [Populus trichocarpa]) HSP 1 Score: 215.3 bits (547), Expect = 7.9e-53 Identity = 104/147 (70.75%), Postives = 121/147 (82.31%), Query Frame = 1
BLAST of Cp4.1LG17g10790 vs. NCBI nr
Match: gi|802554732|ref|XP_012065054.1| (PREDICTED: 15 kDa selenoprotein [Jatropha curcas]) HSP 1 Score: 213.8 bits (543), Expect = 2.3e-52 Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |