Cp4.1LG16g07810 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATGAAAATAGGATGTTTATGAGAGAAAAAAAAGGGATTTGATTGAAGAGATAGCAGAGGTTGAAAGGATACCAATGTTTTTTTTGTCGTATTCAGTTATTTGCATTAAGCTGAGACGCCGCATCGTCATCGTCCCATCCTCTTCCCTTTCCCTTCCTTTTTCTATTTCCGTAGAATTACAGATACCTTTCCCTATATAAACACCCTTCAAAACTCACCATCACTCTGTTCTTAATTTTACGCCCATTTAGCCCTTTTCAACTAAGCTTCTTACTCATCCCGCGATTCGCTTTCGGTACGTTTCTATTCCGCCCTTTTCTCTCTGTGTGTTACTTCTAGATGGGGTTGTGTTTCTCAGGGGAATGGTCTTTTTAGATCTGTTTGCTAATGGAGATGGGGTTTTTGTTCTTCAGTTTCTTGGTTTAGGTTTCTCTAATGGAGATGGGGTTCTTTGTTTTTGAGTTGATTTTCGTCGCTTCCAACTCCAACCTCGTTCTCGTGGATGGATTTTTATTGGGTTTTCTTTGTTTTCTGGAAACTGTTCTATTTGTTCAACAGTAGGCAATTTTTCATGCTCTGTTTTTGCTCTGTTTTTTGCTCTGTTTTGTGTGGTGGAGCGTGGTGATGGCTTCATCGAATCATTTTGTTTTCTGGGTGTTCTTATTTGCCAAAGATCATACGCCAATAGAACTTTTCTCAAGTGATAAACATCGATAATCTTGTTTTCTGGGTGTTCTTATAGGCTCTTTGAATCGGAAGTTCATCATGGTTTTATTAATTGTAACTTGGGCTTGAATTCACTTTTGTTAATTGTTGGGATTGATGCCTTTTTTATTTCTTCTACGCATGATTATGCCTTTCGGATCTGTTTCCCAAGTAATACACTGATGATTCTGTTCACTTTCAAGTGGTTTGCTTGCATATGAGTTTATCTGCTTCAAAAGAAAGCTTATAGATGCTTGAATTTCTTAATTAAATCAATTGAGTCATCTGGGTCTGTCAAGATCATCGTATTCTGATATTTATGGGAACTTCAGAAATCATCCACATCATCTCCCAGTTGGAGGTTTCGTGAAAGAATGTTCAAGAACTGGCCCTTCAGATTACAATAATCTATGAGCTCAGGAACCAATGAAGAATATATTCGAACCAATGGATTAGGATGATAGTTTGGTATCTTATCACTGCTGCAATGGATGGGATGTTTTTGGTTTATTGATGAGTGCCTAGTTCGGCGTGTCTTCATAGCTTCATCTTATCCAAATTCCTGTGTTTTTTTGTCTGTTTCTGTGTGATTTTCTGATCAAATTCTGCAAGATTTCATTAATCTTGTCTTGGAATTTTGTTGTCTTCTTGTTCTTCTGAGTTCTGACATTGTTTTCTGGACATGAAAACAAGACATGGAGCAGCTGTACCTTGTTCCAGATGCTGATGAAGGAGTATCCCATGGCTTTGAATGCAACATATGCCTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTACAAATGGATCCATTACAAGAGCTTGTCCTCACAGCAACAATGCCAGCAAGAGGAATGTCGATGTCCCGTTTGCAAGGCCGAGGTCTCCCACGCCACGCTCGTCCCACTTTACGGCAAATTTCAGACTACACCTCCCTCCAAAACTAAACCACCATCAAATCTTGGTCCAGCCATCCCACGCCGGCCTCTTGGTCCTGCCTGTGGGGCAGAGCCACCAGCATCTCCAAGCGCTCAGCTTCATCATCACAACTATTCTCAGTCACACGACGATTACATCGCTTCATCGATGCTTAGCTCGAGCAGTATTACAACGAACATTATCCATCCAGTGATCGGAATGTTCGGTGACGCAGTTTACACAAGAACGTTTGGAAACACGACAACAAACCTTTATACTTATCCTAATTCATATGGTCATGTAAGCAATAGTAGTGTAAGGCTGAGGAGGCACATAATGCAGGCTGATGAGTCGCTGAGCAGAATCTGTTTCTTCCTGTTTTGTTGCTTAGTGTTGTGTCTTTTATTATTCTAAGCCGCTTGCTTTAGATCATTTCTAGCCATTGGATGTATATATATATATAGATATAGATATATAACATGTCAATACGAGCTTAGTGTAACCATGAATGGATTCACATTGCTTTGATTTGGACATTTCGTAAGCAATCGGTAAGGTGCTGCATTTGTGACCCATCTTCCACATAACACGTCTACTCACCATGTTTTGAAGCTCCAATTGAGTGGAATCGGACTGGATTTTATGGCCTGTTCGTCTGTTTATAATGGAGT TCATGAAAATAGGATGTTTATGAGAGAAAAAAAAGGGATTTGATTGAAGAGATAGCAGAGGTTGAAAGGATACCAATGTTTTTTTTGTCGTATTCAGTTATTTGCATTAAGCTGAGACGCCGCATCGTCATCGTCCCATCCTCTTCCCTTTCCCTTCCTTTTTCTATTTCCGTAGAATTACAGATACCTTTCCCTATATAAACACCCTTCAAAACTCACCATCACTCTGTTCTTAATTTTACGCCCATTTAGCCCTTTTCAACTAAGCTTCTTACTCATCCCGCGATTCGCTTTCGATGGAGCAGCTGTACCTTGTTCCAGATGCTGATGAAGGAGTATCCCATGGCTTTGAATGCAACATATGCCTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTACAAATGGATCCATTACAAGAGCTTGTCCTCACAGCAACAATGCCAGCAAGAGGAATGTCGATGTCCCGTTTGCAAGGCCGAGGTCTCCCACGCCACGCTCGTCCCACTTTACGGCAAATTTCAGACTACACCTCCCTCCAAAACTAAACCACCATCAAATCTTGGTCCAGCCATCCCACGCCGGCCTCTTGGTCCTGCCTGTGGGGCAGAGCCACCAGCATCTCCAAGCGCTCAGCTTCATCATCACAACTATTCTCAGTCACACGACGATTACATCGCTTCATCGATGCTTAGCTCGAGCAGTATTACAACGAACATTATCCATCCAGTGATCGGAATGTTCGGTGACGCAGTTTACACAAGAACGTTTGGAAACACGACAACAAACCTTTATACTTATCCTAATTCATATGGTCATGTAAGCAATAGTAGTGTAAGGCTGAGGAGGCACATAATGCAGGCTGATGAGTCGCTGAGCAGAATCTGTTTCTTCCTGTTTTGTTGCTTAGTGTTGTGTCTTTTATTATTCTAAGCCGCTTGCTTTAGATCATTTCTAGCCATTGGATGTATATATATATATAGATATAGATATATAACATGTCAATACGAGCTTAGTGTAACCATGAATGGATTCACATTGCTTTGATTTGGACATTTCGTAAGCAATCGGTAAGGTGCTGCATTTGTGACCCATCTTCCACATAACACGTCTACTCACCATGTTTTGAAGCTCCAATTGAGTGGAATCGGACTGGATTTTATGGCCTGTTCGTCTGTTTATAATGGAGT ATGGAGCAGCTGTACCTTGTTCCAGATGCTGATGAAGGAGTATCCCATGGCTTTGAATGCAACATATGCCTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTACAAATGGATCCATTACAAGAGCTTGTCCTCACAGCAACAATGCCAGCAAGAGGAATGTCGATGTCCCGTTTGCAAGGCCGAGGTCTCCCACGCCACGCTCGTCCCACTTTACGGCAAATTTCAGACTACACCTCCCTCCAAAACTAAACCACCATCAAATCTTGGTCCAGCCATCCCACGCCGGCCTCTTGGTCCTGCCTGTGGGGCAGAGCCACCAGCATCTCCAAGCGCTCAGCTTCATCATCACAACTATTCTCAGTCACACGACGATTACATCGCTTCATCGATGCTTAGCTCGAGCAGTATTACAACGAACATTATCCATCCAGTGATCGGAATGTTCGGTGACGCAGTTTACACAAGAACGTTTGGAAACACGACAACAAACCTTTATACTTATCCTAATTCATATGGTCATGTAAGCAATAGTAGTGTAAGGCTGAGGAGGCACATAATGCAGGCTGATGAGTCGCTGAGCAGAATCTGTTTCTTCCTGTTTTGTTGCTTAGTGTTGTGTCTTTTATTATTCTAA MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLGPACGAEPPASPSAQLHHHNYSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLLLF
BLAST of Cp4.1LG16g07810 vs. Swiss-Prot
Match: RMA1_CAPAN (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum GN=RMA1H1 PE=1 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.3e-55 Identity = 115/227 (50.66%), Postives = 148/227 (65.20%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. Swiss-Prot
Match: RMA1_ARATH (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 9.6e-46 Identity = 103/220 (46.82%), Postives = 141/220 (64.09%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. Swiss-Prot
Match: RMA3_ARATH (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35 Identity = 95/233 (40.77%), Postives = 128/233 (54.94%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. Swiss-Prot
Match: RMA2_ARATH (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana GN=RMA2 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 7.9e-32 Identity = 86/209 (41.15%), Postives = 112/209 (53.59%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. Swiss-Prot
Match: RN185_RAT (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15 Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TrEMBL
Match: A0A0A0KB39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128040 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.3e-93 Identity = 176/228 (77.19%), Postives = 195/228 (85.53%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TrEMBL
Match: W9STC6_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_009813 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.9e-65 Identity = 132/223 (59.19%), Postives = 156/223 (69.96%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TrEMBL
Match: A0A061EAU9_THECC (RING membrane-anchor 1, putative isoform 1 OS=Theobroma cacao GN=TCM_008094 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.4e-64 Identity = 127/222 (57.21%), Postives = 160/222 (72.07%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TrEMBL
Match: B9N2C6_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0019s13210g PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.2e-64 Identity = 132/229 (57.64%), Postives = 163/229 (71.18%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TrEMBL
Match: A0A067JX84_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25796 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.7e-63 Identity = 123/230 (53.48%), Postives = 163/230 (70.87%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TAIR10
Match: AT4G03510.1 (AT4G03510.1 RING membrane-anchor 1) HSP 1 Score: 184.9 bits (468), Expect = 5.4e-47 Identity = 103/220 (46.82%), Postives = 141/220 (64.09%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TAIR10
Match: AT4G27470.1 (AT4G27470.1 RING membrane-anchor 3) HSP 1 Score: 151.0 bits (380), Expect = 8.7e-37 Identity = 95/233 (40.77%), Postives = 128/233 (54.94%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TAIR10
Match: AT4G28270.1 (AT4G28270.1 RING membrane-anchor 2) HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33 Identity = 86/209 (41.15%), Postives = 112/209 (53.59%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TAIR10
Match: AT1G19310.1 (AT1G19310.1 RING/U-box superfamily protein) HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24 Identity = 59/124 (47.58%), Postives = 68/124 (54.84%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. TAIR10
Match: AT1G74990.1 (AT1G74990.1 RING/U-box superfamily protein) HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23 Identity = 54/124 (43.55%), Postives = 69/124 (55.65%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. NCBI nr
Match: gi|659094879|ref|XP_008448288.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]) HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93 Identity = 174/224 (77.68%), Postives = 192/224 (85.71%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. NCBI nr
Match: gi|449444358|ref|XP_004139942.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 4.7e-93 Identity = 176/228 (77.19%), Postives = 195/228 (85.53%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. NCBI nr
Match: gi|1009128748|ref|XP_015881403.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Ziziphus jujuba]) HSP 1 Score: 263.1 bits (671), Expect = 4.5e-67 Identity = 137/222 (61.71%), Postives = 162/222 (72.97%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. NCBI nr
Match: gi|703151773|ref|XP_010110208.1| (E3 ubiquitin-protein ligase [Morus notabilis]) HSP 1 Score: 256.5 bits (654), Expect = 4.2e-65 Identity = 132/223 (59.19%), Postives = 156/223 (69.96%), Query Frame = 1
BLAST of Cp4.1LG16g07810 vs. NCBI nr
Match: gi|590690709|ref|XP_007043582.1| (RING membrane-anchor 1, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 254.2 bits (648), Expect = 2.1e-64 Identity = 127/222 (57.21%), Postives = 160/222 (72.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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