MELO3C013615 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013615
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	E3 ubiquitin-protein ligase
Location	chr11 : 18186011 .. 18188704 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGCTTTAAGCTCAGACGCCGCATCGTCATCGTCCCATCATCTCTTCTTTTTCCATTTCTATTGAATTTCGGATTCCTTTCCTCTCCCCTTTTCTCGCTTTTTATATAAACACCCTCTCAACCCTCCTCATCCCCCTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCTCTCAACCAACCTTCTTAACTCACACGCACATACTAATCCGCCGATTAAGTTTCGGTACGTTTCCGTTCCCCCCCCCCCCCCCCCCCTGTGTGTATGGGAGTGTGTTTCTCAGTGGAATAAGCTTTTGATCTGTTTGCCAATGTATATCGGTCTTTTTTTTTTAAGTTTTCGGTTTAGGTTTCTTCCTTCCCAAACTTCTGATGGAGATGGGAAGTTCTTAATGTTTTTTGGGTTTTGGGTTTTGGGAATTTTTTTTTTTAATATCGCTTCGAAAACTCCAAATCCCCTTTTTCTGTGGATGACTTTTATTGGGTTTCTTTGTTTTCTGAAACGGTTTTATGTGTTGTGCGGACGGAAAATTTTCATGCTCTGTTTTTGCTCTGTTTTTTAGAGATGTTTTGTGTGGTGTAGGGGTGGGGGTGGATTCATTCGATTGTTTTGTTTGTGCCGAAGATTAATACGCCAATAGAACTTTAGCCAAGTGGTGAGTTACGAAGTTCTTTTGTTATAGGTGTTCTTGTTGGGTCTTTTGAATAGAAAGTTCAGTAGGATTTTCCACCTCTTTGGAAAATGGAAGAGTAATTATGTGGAGTTCTGATTTCGATTGCAACTTGGGTTTTGATTCACCTTTATATTGTTTTTGGTTATTACTTGTTGGGTTTGTGATTTATCTTCATTTAGGAAAATTCTTAGTTATGTATTTATGCCGTTCTGGTTTCTTCTATGCATGATTATGCCTCTCGGATCTGTTTTCCAAGTAACTGATCCGAATTTATGTGTGTACCTAAAGATTGATAGTTATTTTCACTTTCACCTGTACTGAGTTCATCTGCTTCAAAAGATGGCTTATGAGTGCAGAAGATTCTGAATCTTTACCACGTTATGCAGTAAATTGGAACTTCTAACCATTGATTTAGCATAACGTAATCTAGGGAAGTTCTTGGATGCATTGTGTCTGTGAGAGTCATCACGAATCTCCATCATTTGAATTTGTTATTGATTAAATAAATTGAATCTGGGTCTGTCAAGATCAGCATGTTTTGATATTTATGGGAACTTCAGAAATCCTCGACATCATTCTCCACTTGGGGGTTTCGTGATAGAATTTTCAAGAAGCGACCATTCAGAATACAATAATCTATAAGCTTACCCATGTTCGTGTCAGTTCTGGGACCCAATTAATATTATATTTGAACCAGTGGATTAGGATGATTTGTTTTGCCGTTTCATCAGTTATCTTATCACTGCAATGAATGTGATGCTTTTGGTTTATTAATGAATTCCTAGTAAGTCGTGCCTTCATAGCTTCTTTTCCGAATTGTTGATTCTTTTGTCTGCTTCTTTGCATACTTGTATTTACAACAGCAGCCTTTTACTGTGAATTTCTGATTAAGTTGTGTGATTCTATTGATCTTCTCTTAGACTTTAGTTGTTCTGAGTTCTGACCTTGTTTCTTGGATATGTTTATCAGCTTGAGGCATTATAGAAAGAAGACTGCAGAAACATAAACCTGGCCATGGAACAGCAGTACCTTGAAGAGGCTTTGATGCCAAACGACAATTCATTAGGAGGAGACAAATTACGTTTAGACATCCAAACATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTCCAAGAAATTATCTGCACAACAATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCATCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGACCGCTTGGGTGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCCCCCAGCTTCATTCCCACAACTATTCTCCTCAGTCACACTCCTACTACTCACAAACACAAAACGAATACATCTCTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATTGGAATGTTTGGTGACACGATTTACCCAAGAACGTTGGGAAACACAACAACGAACCTGTACAGTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAAGAAGCTCCCTTTAGACCATTTCTAGGTATTGGATGTAGATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGGTATAAATTTCCTTCCAATCTGTTTCATGGGATTGGTGGATGTATAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATTAGATGGGCATTATCATAAGAATCTCCTGATAAGTCATCCATGAAAAAGAATGAAGATAGGGAAAGTTTGCAT

mRNA sequence

TCTGCTTTAAGCTCAGACGCCGCATCGTCATCGTCCCATCATCTCTTCTTTTTCCATTTCTATTGAATTTCGGATTCCTTTCCTCTCCCCTTTTCTCGCTTTTTATATAAACACCCTCTCAACCCTCCTCATCCCCCTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCTCTCAACCAACCTTCTTAACTCACACGCACATACTAATCCGCCGATTAAGTTTCGCTTGAGGCATTATAGAAAGAAGACTGCAGAAACATAAACCTGGCCATGGAACAGCAGTACCTTGAAGAGGCTTTGATGCCAAACGACAATTCATTAGGAGGAGACAAATTACGTTTAGACATCCAAACATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTCCAAGAAATTATCTGCACAACAATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCATCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGACCGCTTGGGTGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCCCCCAGCTTCATTCCCACAACTATTCTCCTCAGTCACACTCCTACTACTCACAAACACAAAACGAATACATCTCTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATTGGAATGTTTGGTGACACGATTTACCCAAGAACGTTGGGAAACACAACAACGAACCTGTACAGTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAAGAAGCTCCCTTTAGACCATTTCTAGGTATTGGATGTAGATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGGTATAAATTTCCTTCCAATCTGTTTCATGGGATTGGTGGATGTATAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATTAGATGGGCATTATCATAAGAATCTCCTGATAAGTCATCCATGAAAAAGAATGAAGATAGGGAAAGTTTGCAT

Coding sequence (CDS)

ATGGAACAGCAGTACCTTGAAGAGGCTTTGATGCCAAACGACAATTCATTAGGAGGAGACAAATTACGTTTAGACATCCAAACATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTCCAAGAAATTATCTGCACAACAATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCATCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCCAAAGCTAAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGACCGCTTGGGTGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCCCCCAGCTTCATTCCCACAACTATTCTCCTCAGTCACACTCCTACTACTCACAAACACAAAACGAATACATCTCTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATTGGAATGTTTGGTGACACGATTTACCCAAGAACGTTGGGAAACACAACAACGAACCTGTACAGTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTCTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAA

Protein sequence

MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF*

Homology

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BLAST of MELO3C013615 vs. Swiss-Prot
Match: RMA1_CAPAN (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-58
Identity = 117/257 (45.53%), Postives = 153/257 (59.53%), Query Frame = 1


Query: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           M  + L+     +D  LG  K   D      + E+  S GFDCNICLD V +PV+TLCGH
Sbjct: 5   MALEQLDTTFNKHDTPLGKWKSMND------EVEENISGGFDCNICLDCVHEPVITLCGH 64

Query: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGK-FQTTDASKAKAPP 120
           L+CWPCIYKW++ + +S++   Q + +CPVCKA+VS  TLIP+YG+  Q+T  S+ KA P
Sbjct: 65  LYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKA-P 124

Query: 121 NLGPAIPRRP----LGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSS 180
           NLG  IP+RP     G H     T ++P+  L    Y  QS +     Q  Y+SS MLS 
Sbjct: 125 NLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAYQGSYMSSPMLSP 184

Query: 181 SSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLS 240
              T N++     M G+  Y R  GN++T +Y+YPNSY    +SS R+RR + QAD SL 
Sbjct: 185 GGATANMLQH--SMIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLG 244

Query: 241 RICFFFFCCLVICLLLF 253
           RICFF FCC V CL+LF
Sbjct: 245 RICFFLFCCFVTCLILF 252

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BLAST of MELO3C013615 vs. Swiss-Prot
Match: RMA1_ARATH (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.5e-46
Identity = 96/221 (43.44%), Postives = 134/221 (60.63%), Query Frame = 1


Query: 33  AEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECRCPVCK 92
           ++D     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHSHNY 152
           +KVS +TL+P+YG+ + T   + K       ++P+RP+G      E P SP         
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSPYAST-DLRL 157

Query: 153 SPQSHSYYSQTQNEYISSSMLSSSSIT-TNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPN 212
           S + H + S  +  Y  S ++SS+S++ + ++ PV+ M G+ +  R  G    + ++YP+
Sbjct: 158 SQRVH-FNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPD 217

Query: 213 SYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           +Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

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BLAST of MELO3C013615 vs. Swiss-Prot
Match: RMA3_ARATH (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.3e-40
Identity = 90/235 (38.30%), Postives = 130/235 (55.32%), Query Frame = 1


Query: 21  KLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQ 80
           K + ++ T  +  +   S  FDCNICLD+  DPVVTLCGHLFCWPCIYKWLH  +LS+  
Sbjct: 22  KQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLH-VQLSSVS 81

Query: 81  CQQVECRCPVCKAKVSRATLIPIYGKFQTTDASK--AKAPPNLGPAIPRRPLGWHACEAE 140
             Q +  CPVCK+ ++  +L+P+YG+  ++ +S   +K    L   IPRRP         
Sbjct: 82  VDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPI 141

Query: 141 TPASP-TPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITTNIIHPVIGMFGDTIYPR 200
           T AS   P L     SP  H++    +    + S   ++++  + ++PVIGMFGD +Y R
Sbjct: 142 TSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTR 201

Query: 201 TLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
             G T TN  + P              + +MQ ++SL+R+  FF CC+++CLLLF
Sbjct: 202 IFG-TFTNTIAQPYQ-----------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

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BLAST of MELO3C013615 vs. Swiss-Prot
Match: RMA2_ARATH (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana GN=RMA2 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31
Identity = 82/217 (37.79%), Postives = 110/217 (50.69%), Query Frame = 1


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECR-----CPVCKAKV 100
           FDCNICLD V+DPVVTLCGHLFCWPCI+KW ++   S Q+  Q + +     CPVCK+ V
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDV 78

Query: 101 SRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQ 160
           S ATL+PIYG+ Q       KAP + G  +P RP G        P      +       +
Sbjct: 79  SEATLVPIYGRGQ-------KAPQS-GSNVPSRPTG--------PVYDLRGVGQRLGEGE 138

Query: 161 SHSYYSQTQNEYISSSMLSSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGN 220
           S  Y  +  +                   PV+G+  + +Y R  G +++N+  Y      
Sbjct: 139 SQRYMYRMPD-------------------PVMGVVCEMVYRRLFGESSSNMAPY------ 193

Query: 221 VSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
             + +VR RR  MQA+ESLSR+  F  C + +CL LF
Sbjct: 199 -RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

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BLAST of MELO3C013615 vs. Swiss-Prot
Match: RN185_MOUSE (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-16
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 1


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATL 100
           F+CNICLD+ +D V++LCGHLFCWPC+++WL ++       +QV   CPVCKA +SR  +
Sbjct: 37  FECNICLDTAKDAVISLCGHLFCWPCLHQWLETR-----PNRQV---CPVCKAGISRDKV 96

Query: 101 IPIYGKFQTTDAS-KAKAPP 120
           IP+YG+  T     + K PP
Sbjct: 97  IPLYGRGSTGQQDPREKTPP 108

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BLAST of MELO3C013615 vs. TrEMBL
Match: A0A0A0KB39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128040 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 9.5e-137
Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 1


Query: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEE LM NDNSLGGD+L LD Q YISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQEYLEETLMQNDNSLGGDRLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120
           LFCWPCIYKWLH KKLSAQ+CQQVECRCPVCKAKVSRATL+PIYGKFQTTDASKA+APPN
Sbjct: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120

Query: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180
           LGPAIPRRPLG HACEAETPASPTPQLHS NYSPQSHSYY+QTQNEYI+SSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNEYIASSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNV+NSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

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BLAST of MELO3C013615 vs. TrEMBL
Match: A0A067JX84_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25796 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.6e-67
Identity = 133/259 (51.35%), Postives = 177/259 (68.34%), Query Frame = 1


Query: 3   QQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLF 62
           Q Y+EE++  ND+ +  D  +      I+D+ED  S GF+CNICLDSVQ+PVVTLCGHL+
Sbjct: 4   QHYIEESIEENDH-MREDNWK-STSDNIADSEDSTSSGFECNICLDSVQEPVVTLCGHLY 63

Query: 63  CWPCIYKWLHSKKLSAQ-QCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPNL 122
           CWPCIYKWLH + +SA+ +  + + +CPVCKA+VS  TL+P++G+ QT   SK+KAP NL
Sbjct: 64  CWPCIYKWLHFQSISAENEDLEPQQQCPVCKAEVSEGTLVPLFGRGQTAKPSKSKAP-NL 123

Query: 123 GPAIPRRPLGWHACEAETPASP--------TPQLHSHNYSPQSHSYYSQTQNEYISSSML 182
           G  IPRRPLG  AC  ++P SP        T Q ++ NY+  S  YYS+    Y  S M+
Sbjct: 124 GIIIPRRPLGL-ACGFDSPRSPFMTSSPQPTQQTYNRNYTNHSQVYYSRPGG-YSPSPMI 183

Query: 183 SSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADES 242
           +      N+  PVIGMFG+ IY R  GN+ TN+YSYP+SY    ++S R+RRH+MQAD+S
Sbjct: 184 NPRVTAANMFDPVIGMFGEMIYARVFGNSVTNIYSYPDSYNLAGSTSPRVRRHVMQADKS 243

Query: 243 LSRICFFFFCCLVICLLLF 253
           LSRICFF FCC+ +C L F
Sbjct: 244 LSRICFFLFCCVFLCFLSF 257

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BLAST of MELO3C013615 vs. TrEMBL
Match: W9STC6_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_009813 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.1e-67
Identity = 132/251 (52.59%), Postives = 166/251 (66.14%), Query Frame = 1


Query: 4   QYLEEALMPNDNSLGGDKLRLDI-QTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLF 63
           QY EEA MP +NS+   K      +++  D ++  S GFDCNICLD+V DPVVTLCGHLF
Sbjct: 5   QYFEEA-MPQNNSMEETKSSCQKWKSFSKDGDNNPSTGFDCNICLDTVHDPVVTLCGHLF 64

Query: 64  CWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPNLG 123
           CWPCIYKWLH +    +Q QQ   +CPVCKA+VS+A+L+P+YG+ QTT  SK KAP NLG
Sbjct: 65  CWPCIYKWLHFQSTQEEQQQQ---QCPVCKAEVSQASLVPLYGRGQTTKPSKGKAP-NLG 124

Query: 124 PAIPRRPLGWHACEAETPASPTPQLHSHNYS-PQSHSYYSQTQNEYISSSMLSSSSITTN 183
             IP+RPLG            +P +    Y  P      S  +  +  S MLS S + TN
Sbjct: 125 IVIPKRPLGPFYGVDSPSVLTSPHMSQQFYRYPHQSQLNSSRRGSHAPSPMLSPSGVATN 184

Query: 184 IIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFFF 243
           +  P IG+FG+ IY R  GN+ TNLY+YPNSY  V N+S R+RRH+MQAD+SL R+CFF 
Sbjct: 185 LFDPTIGIFGEMIYARVFGNSITNLYTYPNSYNLVGNASPRVRRHVMQADKSLGRVCFFL 244

Query: 244 FCCLVICLLLF 253
           FCC V+CLLLF
Sbjct: 245 FCCSVLCLLLF 250

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BLAST of MELO3C013615 vs. TrEMBL
Match: U5FVY0_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0013s13580g PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.8e-66
Identity = 136/263 (51.71%), Postives = 176/263 (66.92%), Query Frame = 1


Query: 4   QYLEEALMPNDNSLGGDKLRL----DIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCG 63
           QY+EE +  ND +   DK  L     +   + D++D  S GFDCNICLDSV DPVVTLCG
Sbjct: 5   QYMEETMAQNDYNRE-DKPSLPNWKSVSETVIDSDDSRSSGFDCNICLDSVHDPVVTLCG 64

Query: 64  HLFCWPCIYKWLHSKKLSAQ-QCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAP 123
           HL+CWPCIYKWLH + +SA+ Q Q  + +CPVCKA+VS++T++P++G+ QTT   K KAP
Sbjct: 65  HLYCWPCIYKWLHFQSISAENQDQHPQQQCPVCKAEVSQSTIVPLFGRGQTTKPCKGKAP 124

Query: 124 PNLGPAIPRRPLGWHACEAETPASP--------TPQLHS-HNYSPQSHSYYSQTQNEYIS 183
            NLG  IPRRP G  AC  ++P SP        TPQ+H  HNY  QS  YYSQ ++   +
Sbjct: 125 -NLGIIIPRRPPG-RACGFDSPRSPIATSSPRVTPQIHHRHNYPHQSQHYYSQPRSNS-T 184

Query: 184 SSMLSSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQ 243
           S M S    T N+    +GMFG+ +Y R  GN+ TN++SYPNSY    ++S R+RRH+MQ
Sbjct: 185 SPMRSPGGSTLNMPALEVGMFGEMMYSRVFGNSITNIHSYPNSYHLAGSASPRVRRHVMQ 244

Query: 244 ADESLSRICFFFFCCLVICLLLF 253
           AD SLSRICFF FCC+ +C L F
Sbjct: 245 ADRSLSRICFFLFCCVFLCFLSF 263

[Close]

BLAST of MELO3C013615 vs. TrEMBL
Match: B9N2C6_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0019s13210g PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.1e-66
Identity = 136/263 (51.71%), Postives = 176/263 (66.92%), Query Frame = 1


Query: 3   QQYLEEALMPNDNSLGGDKLRLD---IQTYISDAEDEASHGFDCNICLDSVQDPVVTLCG 62
           +QYLEE +  ND +       L    I     D+++  S+GFDCNICLDSVQDPVVTLCG
Sbjct: 4   EQYLEETVAQNDYNREYKPSLLKWKPIPKTAIDSDESPSNGFDCNICLDSVQDPVVTLCG 63

Query: 63  HLFCWPCIYKWLHSKKLSAQ-QCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAP 122
           HL+CWPCIYKWLHS+ +SA+ Q QQ + +CPVCKA+VS++T++P++G+ QTT  S  KAP
Sbjct: 64  HLYCWPCIYKWLHSQSISAENQDQQPQQQCPVCKAEVSQSTIVPLFGRGQTTKPSMRKAP 123

Query: 123 PNLGPAIPRRPLGWHACEAETPASP----TPQL-----HSHNYSPQSHSYYSQTQNEYIS 182
            N+G  IP RP G  AC  ++P +P    +P+      H HNY  QS  +YSQ    Y +
Sbjct: 124 -NVGIIIPHRPPGL-ACGFDSPRTPIATGSPRPVQQIHHRHNYPHQSQLHYSQP-GSYSA 183

Query: 183 SSMLSSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQ 242
           S M S    T N+  PV+GMFG+ IY R  GN+ TN+ SYPNSY    ++S R+RRH+MQ
Sbjct: 184 SPMHSPRGTTINMADPVVGMFGEMIYARVFGNSITNMPSYPNSYHLAGSASPRVRRHVMQ 243

Query: 243 ADESLSRICFFFFCCLVICLLLF 253
           AD SLSRICFF FCC+ +C L F
Sbjct: 244 ADRSLSRICFFLFCCVFLCFLSF 263

[Close]

BLAST of MELO3C013615 vs. TAIR10
Match: AT4G03510.1 (AT4G03510.1 RING membrane-anchor 1)

HSP 1 Score: 185.7 bits (470), Expect = 3.6e-47
Identity = 96/221 (43.44%), Postives = 134/221 (60.63%), Query Frame = 1


Query: 33  AEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECRCPVCK 92
           ++D     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHSHNY 152
           +KVS +TL+P+YG+ + T   + K       ++P+RP+G      E P SP         
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSPYAST-DLRL 157

Query: 153 SPQSHSYYSQTQNEYISSSMLSSSSIT-TNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPN 212
           S + H + S  +  Y  S ++SS+S++ + ++ PV+ M G+ +  R  G    + ++YP+
Sbjct: 158 SQRVH-FNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPD 217

Query: 213 SYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
           +Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 TYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of MELO3C013615 vs. TAIR10
Match: AT4G27470.1 (AT4G27470.1 RING membrane-anchor 3)

HSP 1 Score: 166.0 bits (419), Expect = 3.0e-41
Identity = 90/235 (38.30%), Postives = 130/235 (55.32%), Query Frame = 1


Query: 21  KLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQ 80
           K + ++ T  +  +   S  FDCNICLD+  DPVVTLCGHLFCWPCIYKWLH  +LS+  
Sbjct: 22  KQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLH-VQLSSVS 81

Query: 81  CQQVECRCPVCKAKVSRATLIPIYGKFQTTDASK--AKAPPNLGPAIPRRPLGWHACEAE 140
             Q +  CPVCK+ ++  +L+P+YG+  ++ +S   +K    L   IPRRP         
Sbjct: 82  VDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPI 141

Query: 141 TPASP-TPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITTNIIHPVIGMFGDTIYPR 200
           T AS   P L     SP  H++    +    + S   ++++  + ++PVIGMFGD +Y R
Sbjct: 142 TSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTR 201

Query: 201 TLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
             G T TN  + P              + +MQ ++SL+R+  FF CC+++CLLLF
Sbjct: 202 IFG-TFTNTIAQPYQ-----------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of MELO3C013615 vs. TAIR10
Match: AT4G28270.1 (AT4G28270.1 RING membrane-anchor 2)

HSP 1 Score: 138.3 bits (347), Expect = 6.7e-33
Identity = 82/217 (37.79%), Postives = 110/217 (50.69%), Query Frame = 1


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECR-----CPVCKAKV 100
           FDCNICLD V+DPVVTLCGHLFCWPCI+KW ++   S Q+  Q + +     CPVCK+ V
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDV 78

Query: 101 SRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQ 160
           S ATL+PIYG+ Q       KAP + G  +P RP G        P      +       +
Sbjct: 79  SEATLVPIYGRGQ-------KAPQS-GSNVPSRPTG--------PVYDLRGVGQRLGEGE 138

Query: 161 SHSYYSQTQNEYISSSMLSSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGN 220
           S  Y  +  +                   PV+G+  + +Y R  G +++N+  Y      
Sbjct: 139 SQRYMYRMPD-------------------PVMGVVCEMVYRRLFGESSSNMAPY------ 193

Query: 221 VSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 253
             + +VR RR  MQA+ESLSR+  F  C + +CL LF
Sbjct: 199 -RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of MELO3C013615 vs. TAIR10
Match: AT1G19310.1 (AT1G19310.1 RING/U-box superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-24
Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = 1


Query: 31  SDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECRCPV 90
           +D  +  S  F+CNICLD  QDP+VTLCGHLFCWPC+YKWLH    S          CPV
Sbjct: 11  NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKD--------CPV 70

Query: 91  CKAKVSRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHSH 150
           CKA +    L+P+YG+ +++   ++K+ P L   +P RP G     A+ P       H H
Sbjct: 71  CKAVIEEDRLVPLYGRGKSSADPRSKSIPGL--EVPNRPSGQRPETAQPPDPNHGFAHHH 122

Query: 151 NY 153
            +
Sbjct: 131 GF 122

[Close]

BLAST of MELO3C013615 vs. TAIR10
Match: AT1G74990.1 (AT1G74990.1 RING/U-box superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 9.7e-24
Identity = 55/132 (41.67%), Postives = 72/132 (54.55%), Query Frame = 1


Query: 30  ISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSAQQCQQVECRCP 89
           I++ ED+AS+ F CNICL+  ++P+VTLCGHLFCWPC+YKWLH    S          CP
Sbjct: 6   ITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSN--------HCP 65

Query: 90  VCKAKVSRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLHS 149
           VCKA V   TL+P+YG  + +   ++K   N G  +P RP    A   ET      Q H 
Sbjct: 66  VCKALVKEDTLVPLYGMGKPSSDPRSKL--NSGVTVPNRPA---ATRTETARPRLEQRHH 124

Query: 150 HNYSPQSHSYYS 162
            +     HS ++
Sbjct: 126 GSSFFGGHSSFA 124

[Close]

BLAST of MELO3C013615 vs. NCBI nr
Match: gi|659094879|ref|XP_008448288.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo])

HSP 1 Score: 532.7 bits (1371), Expect = 3.4e-148
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1


Query: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120
           LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180
           LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

[Close]

BLAST of MELO3C013615 vs. NCBI nr
Match: gi|449444358|ref|XP_004139942.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 1.4e-136
Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 1


Query: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEE LM NDNSLGGD+L LD Q YISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQEYLEETLMQNDNSLGGDRLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120
           LFCWPCIYKWLH KKLSAQ+CQQVECRCPVCKAKVSRATL+PIYGKFQTTDASKA+APPN
Sbjct: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120

Query: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSSITT 180
           LGPAIPRRPLG HACEAETPASPTPQLHS NYSPQSHSYY+QTQNEYI+SSMLSSSSITT
Sbjct: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNEYIASSMLSSSSITT 180

Query: 181 NIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFF 240
           NIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNV+NSSVRLRRHIMQADESLSRICFF
Sbjct: 181 NIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFF 240

Query: 241 FFCCLVICLLLF 253
           FFCCLVICLLLF
Sbjct: 241 FFCCLVICLLLF 252

[Close]

BLAST of MELO3C013615 vs. NCBI nr
Match: gi|1009128748|ref|XP_015881403.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Ziziphus jujuba])

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-67
Identity = 136/255 (53.33%), Postives = 172/255 (67.45%), Query Frame = 1


Query: 3   QQYLEEALMP----NDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLC 62
           +QY +  + P     DN     K    I   ++D +++++ GF+CNICLD+V DPVVTLC
Sbjct: 4   EQYSQGTMNPAESIEDNKSSFKKWN-SITDTVADFDNDSAGGFECNICLDTVHDPVVTLC 63

Query: 63  GHLFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAP 122
           GHLFCWPCIYKWLH +  S++   Q   +CPVCKA+VS+A+L+P+YG+ QTT  SK KA 
Sbjct: 64  GHLFCWPCIYKWLHFQSASSETEDQTPQQCPVCKAEVSQASLVPLYGRGQTTKPSKGKA- 123

Query: 123 PNLGPAIPRRPLGWHACEAETPAS-PTPQLHSHNYSPQSHSYYSQTQNEYISSSMLSSSS 182
           PNLG  IPRRPLG   C  ++P+   T QL+  NY  QS   YS  Q  Y +S MLS   
Sbjct: 124 PNLGIVIPRRPLG-PICGFDSPSQHTTQQLYYQNYPNQSQLNYS--QRGYSASPMLSPGG 183

Query: 183 ITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRI 242
            TTNI  P IGM G+ IY R  GN+ TNLY+YPNSY    +SS R+RRH+MQAD SLSRI
Sbjct: 184 STTNIFDPTIGMLGEMIYARVFGNSMTNLYTYPNSYHLAGSSSPRVRRHVMQADRSLSRI 243

Query: 243 CFFFFCCLVICLLLF 253
            FF FCC+++CLLLF
Sbjct: 244 TFFLFCCVILCLLLF 253

[Close]

BLAST of MELO3C013615 vs. NCBI nr
Match: gi|802752613|ref|XP_012088296.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas])

HSP 1 Score: 263.1 bits (671), Expect = 5.1e-67
Identity = 133/259 (51.35%), Postives = 177/259 (68.34%), Query Frame = 1


Query: 3   QQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLF 62
           Q Y+EE++  ND+ +  D  +      I+D+ED  S GF+CNICLDSVQ+PVVTLCGHL+
Sbjct: 4   QHYIEESIEENDH-MREDNWK-STSDNIADSEDSTSSGFECNICLDSVQEPVVTLCGHLY 63

Query: 63  CWPCIYKWLHSKKLSAQ-QCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPNL 122
           CWPCIYKWLH + +SA+ +  + + +CPVCKA+VS  TL+P++G+ QT   SK+KAP NL
Sbjct: 64  CWPCIYKWLHFQSISAENEDLEPQQQCPVCKAEVSEGTLVPLFGRGQTAKPSKSKAP-NL 123

Query: 123 GPAIPRRPLGWHACEAETPASP--------TPQLHSHNYSPQSHSYYSQTQNEYISSSML 182
           G  IPRRPLG  AC  ++P SP        T Q ++ NY+  S  YYS+    Y  S M+
Sbjct: 124 GIIIPRRPLGL-ACGFDSPRSPFMTSSPQPTQQTYNRNYTNHSQVYYSRPGG-YSPSPMI 183

Query: 183 SSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADES 242
           +      N+  PVIGMFG+ IY R  GN+ TN+YSYP+SY    ++S R+RRH+MQAD+S
Sbjct: 184 NPRVTAANMFDPVIGMFGEMIYARVFGNSVTNIYSYPDSYNLAGSTSPRVRRHVMQADKS 243

Query: 243 LSRICFFFFCCLVICLLLF 253
           LSRICFF FCC+ +C L F
Sbjct: 244 LSRICFFLFCCVFLCFLSF 257

[Close]

BLAST of MELO3C013615 vs. NCBI nr
Match: gi|703151773|ref|XP_010110208.1| (E3 ubiquitin-protein ligase [Morus notabilis])

HSP 1 Score: 262.3 bits (669), Expect = 8.7e-67
Identity = 132/251 (52.59%), Postives = 166/251 (66.14%), Query Frame = 1


Query: 4   QYLEEALMPNDNSLGGDKLRLDI-QTYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLF 63
           QY EEA MP +NS+   K      +++  D ++  S GFDCNICLD+V DPVVTLCGHLF
Sbjct: 5   QYFEEA-MPQNNSMEETKSSCQKWKSFSKDGDNNPSTGFDCNICLDTVHDPVVTLCGHLF 64

Query: 64  CWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPNLG 123
           CWPCIYKWLH +    +Q QQ   +CPVCKA+VS+A+L+P+YG+ QTT  SK KAP NLG
Sbjct: 65  CWPCIYKWLHFQSTQEEQQQQ---QCPVCKAEVSQASLVPLYGRGQTTKPSKGKAP-NLG 124

Query: 124 PAIPRRPLGWHACEAETPASPTPQLHSHNYS-PQSHSYYSQTQNEYISSSMLSSSSITTN 183
             IP+RPLG            +P +    Y  P      S  +  +  S MLS S + TN
Sbjct: 125 IVIPKRPLGPFYGVDSPSVLTSPHMSQQFYRYPHQSQLNSSRRGSHAPSPMLSPSGVATN 184

Query: 184 IIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSRICFFF 243
           +  P IG+FG+ IY R  GN+ TNLY+YPNSY  V N+S R+RRH+MQAD+SL R+CFF 
Sbjct: 185 LFDPTIGIFGEMIYARVFGNSITNLYTYPNSYNLVGNASPRVRRHVMQADKSLGRVCFFL 244

Query: 244 FCCLVICLLLF 253
           FCC V+CLLLF
Sbjct: 245 FCCSVLCLLLF 250

The following BLAST results are available for this feature:

BLAST of MELO3C013615 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RMA1_CAPAN	5.6e-58	45.53	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum GN=RMA1H1 PE=1 SV=1	[more]
RMA1_ARATH	6.5e-46	43.44	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1	[more]
RMA3_ARATH	5.3e-40	38.30	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1	[more]
RMA2_ARATH	1.2e-31	37.79	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana GN=RMA2 PE=1 SV=1	[more]
RN185_MOUSE	3.1e-16	48.75	E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1	[more]

BLAST of MELO3C013615 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB39_CUCSA	9.5e-137	92.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128040 PE=4 SV=1	[more]
A0A067JX84_JATCU	3.6e-67	51.35	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25796 PE=4 SV=1	[more]
W9STC6_9ROSA	6.1e-67	52.59	E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_009813 PE=4 SV=1	[more]
U5FVY0_POPTR	1.8e-66	51.71	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0013s13580g PE=4 SV=1	[more]
B9N2C6_POPTR	5.1e-66	51.71	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0019s13210g PE=4 SV=1	[more]

BLAST of MELO3C013615 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03510.1	3.6e-47	43.44	RING membrane-anchor 1	[more]
AT4G27470.1	3.0e-41	38.30	RING membrane-anchor 3	[more]
AT4G28270.1	6.7e-33	37.79	RING membrane-anchor 2	[more]
AT1G19310.1	3.3e-24	41.80	RING/U-box superfamily protein	[more]
AT1G74990.1	9.7e-24	41.67	RING/U-box superfamily protein	[more]

BLAST of MELO3C013615 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094879\|ref\|XP_008448288.1\|	3.4e-148	100.00	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]	[more]
gi\|449444358\|ref\|XP_004139942.1\|	1.4e-136	92.46	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus]	[more]
gi\|1009128748\|ref\|XP_015881403.1\|	3.9e-67	53.33	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Ziziphus jujuba]	[more]
gi\|802752613\|ref\|XP_012088296.1\|	5.1e-67	51.35	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas]	[more]
gi\|703151773\|ref\|XP_010110208.1\|	8.7e-67	52.59	E3 ubiquitin-protein ligase [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU56419	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013615T1	MELO3C013615T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU56419	MU56419	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 43..91 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 43..92 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 32..104 score: 1.1
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 58..67 scor
None	No IPR available	PANTHER	PTHR12313	RNF5	coord: 3..252 score: 1.9
None	No IPR available	PANTHER	PTHR12313:SF5	SUBFAMILY NOT NAMED	coord: 3..252 score: 1.9
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 43..75 score: 2.
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 37..105 score: 2.59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C013615	Csa6G128040	Cucumber (Chinese Long) v2	cumeB446
MELO3C013615	Csa7G047460	Cucumber (Chinese Long) v2	cumeB514
MELO3C013615	Cla013565	Watermelon (97103) v1	mewmB109
MELO3C013615	ClCG02G017600	Watermelon (Charleston Gray)	mewcgB095
MELO3C013615	Cla97C02G043360	Watermelon (97103) v2	mewmbB097
MELO3C013615	Bhi05G001615	Wax gourd	mewgoB110
MELO3C013615	Bhi10G000869	Wax gourd	mewgoB132
MELO3C013615	CSPI07G04590	Wild cucumber (PI 183967)	cpimeB519
MELO3C013615	CSPI06G10480	Wild cucumber (PI 183967)	cpimeB438
MELO3C013615	Cucsa.147700	Cucumber (Gy14) v1	cgymeB247
MELO3C013615	CmaCh20G001960	Cucurbita maxima (Rimu)	cmameB496
MELO3C013615	CmoCh20G002150	Cucurbita moschata (Rifu)	cmomeB487
MELO3C013615	Lsi10G008930	Bottle gourd (USVL1VR-Ls)	lsimeB048
MELO3C013615	Lsi11G015480	Bottle gourd (USVL1VR-Ls)	lsimeB087
MELO3C013615	Cp4.1LG16g07810	Cucurbita pepo (Zucchini)	cpemeB263
MELO3C013615	CsGy6G010600	Cucumber (Gy14) v2	cgybmeB384
MELO3C013615	Carg19119	Silver-seed gourd	carmeB0714
MELO3C013615	Carg18451	Silver-seed gourd	carmeB0417
MELO3C013615	CsaV3_6G012970	Cucumber (Chinese Long) v3	cucmeB449
MELO3C013615	CsaV3_7G004390	Cucumber (Chinese Long) v3	cucmeB531

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C013615	MELO3C018740	Melon (DHL92) v3.5.1	memeB043

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013615	Cucumber (Gy14) v1	cgymeB177
MELO3C013615	Cucurbita maxima (Rimu)	cmameB555
MELO3C013615	Cucurbita moschata (Rifu)	cmomeB543
MELO3C013615	Cucurbita pepo (Zucchini)	cpemeB661
MELO3C013615	Silver-seed gourd	carmeB0027