CmaCh12G005320 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTTTCAACGTGATGTTCGAGGATCAACTCAACTCAACAATCAAGGATTTTTATCTAATATTCCAAAAACAAACGACAAGGGTGCCAACAAGCTTAGCTCAAATGCTCATACAAACCCAAAAATACAAGTACAAGACAAAGCTACAAAATCTTCGACAAAAGCTCCTAGTGAAAAGGTATCTAATGTGCGACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAATATTATGATAGCGACAAAGACGGTTTTCTCAACATAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCTCAATACGCTATGACTTTTGTTGATGCTAATAACGATAGTCTTATCAATGAAGCTGAGCTTGAGAAACTTATAGATTATGCCTGTAAAATTATCAAAAAGAAATGA ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTTTCAACGTGATGTTCGAGGATCAACTCAACTCAACAATCAAGGATTTTTATCTAATATTCCAAAAACAAACGACAAGGGTGCCAACAAGCTTAGCTCAAATGCTCATACAAACCCAAAAATACAAGTACAAGACAAAGCTACAAAATCTTCGACAAAAGCTCCTAGTGAAAAGGTATCTAATGTGCGACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAATATTATGATAGCGACAAAGACGGTTTTCTCAACATAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCTCAATACGCTATGACTTTTGTTGATGCTAATAACGATAGTCTTATCAATGAAGCTGAGCTTGAGAAACTTATAGATTATGCCTGTAAAATTATCAAAAAGAAATGA ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTTTCAACGTGATGTTCGAGGATCAACTCAACTCAACAATCAAGGATTTTTATCTAATATTCCAAAAACAAACGACAAGGGTGCCAACAAGCTTAGCTCAAATGCTCATACAAACCCAAAAATACAAGTACAAGACAAAGCTACAAAATCTTCGACAAAAGCTCCTAGTGAAAAGGTATCTAATGTGCGACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAATATTATGATAGCGACAAAGACGGTTTTCTCAACATAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCTCAATACGCTATGACTTTTGTTGATGCTAATAACGATAGTCTTATCAATGAAGCTGAGCTTGAGAAACTTATAGATTATGCCTGTAAAATTATCAAAAAGAAATGA MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFQRDVRGSTQLNNQGFLSNIPKTNDKGANKLSSNAHTNPKIQVQDKATKSSTKAPSEKVSNVRLSREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFVDANNDSLINEAELEKLIDYACKIIKKK
BLAST of CmaCh12G005320 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 5.0e-52 Identity = 120/177 (67.80%), Postives = 140/177 (79.10%), Query Frame = 1
BLAST of CmaCh12G005320 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.2e-35 Identity = 94/176 (53.41%), Postives = 120/176 (68.18%), Query Frame = 1
BLAST of CmaCh12G005320 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 7.2e-35 Identity = 89/167 (53.29%), Postives = 115/167 (68.86%), Query Frame = 1
BLAST of CmaCh12G005320 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28 Identity = 83/180 (46.11%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of CmaCh12G005320 vs. TrEMBL
Match: A0A0A0LNG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359930 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15 Identity = 56/169 (33.14%), Postives = 87/169 (51.48%), Query Frame = 1
BLAST of CmaCh12G005320 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]) HSP 1 Score: 212.2 bits (539), Expect = 7.1e-52 Identity = 120/177 (67.80%), Postives = 140/177 (79.10%), Query Frame = 1
BLAST of CmaCh12G005320 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]) HSP 1 Score: 185.7 bits (470), Expect = 7.2e-44 Identity = 111/177 (62.71%), Postives = 130/177 (73.45%), Query Frame = 1
BLAST of CmaCh12G005320 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus]) HSP 1 Score: 156.0 bits (393), Expect = 6.1e-35 Identity = 94/176 (53.41%), Postives = 120/176 (68.18%), Query Frame = 1
BLAST of CmaCh12G005320 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 89/167 (53.29%), Postives = 115/167 (68.86%), Query Frame = 1
BLAST of CmaCh12G005320 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28 Identity = 83/180 (46.11%), Postives = 119/180 (66.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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