Cucsa.286560 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.286560
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRING/U-box superfamily protein
Locationscaffold02653 : 2602804 .. 2603220 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGGGTGTTGCTGTTGCCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTTATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATAGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGGGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAA

mRNA sequence

ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGGGTGTTGCTGTTGCCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTTATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATAGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGGGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAA

Coding sequence (CDS)

ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGGGTGTTGCTGTTGCCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTTATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATAGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGGGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAA

Protein sequence

MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRSIE*
Homology
[Close]
BLAST of Cucsa.286560 vs. Swiss-Prot
Match: XERIC_ARATH (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana GN=XERICO PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-17
Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V+++NT +S++ +K  VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NRRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q ++  + F   T     E + RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

[Close]
BLAST of Cucsa.286560 vs. Swiss-Prot
Match: RHA2B_ARATH (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 5.9e-09
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           ++C VCL + +  EEV +L C+H FHK CL  W  + +F CPLCRS
Sbjct: 72  SDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 117

[Close]
BLAST of Cucsa.286560 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 1 

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           AECC+CLC +E   E+ EL C H FH  C+ KW  + +  CPLC+
Sbjct: 336 AECCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCK 379

[Close]
BLAST of Cucsa.286560 vs. Swiss-Prot
Match: AIP2_ARATH (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-07
Identity = 24/56 (42.86%), Postives = 31/56 (55.36%), Query Frame = 1 

Query: 80  TEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           TEE        AECC+C       +++ EL CKH FH  CL  W D +H +CP+CR
Sbjct: 217 TEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLD-EHNSCPICR 271

[Close]
BLAST of Cucsa.286560 vs. Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 9.5e-07
Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 1 

Query: 92  ECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           +C VCL  FE  E V E+ CKH FH  C+  W  NK  +CPLCR
Sbjct: 78  KCPVCLLEFEEQESVREMPCKHLFHTGCILPWL-NKTNSCPLCR 120

[Close]
BLAST of Cucsa.286560 vs. TrEMBL
Match: A0A0A0KTI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598060 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 7.4e-75
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

[Close]
BLAST of Cucsa.286560 vs. TrEMBL
Match: A0A061E8K8_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010559 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.1e-41
Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEE----YDW 60
           MGLSNFP +AEGVL  PVLVMNTV+S+A LKN VRS++Q++ ASG+SSSS ++    Y  
Sbjct: 1   MGLSNFPSAAEGVL--PVLVMNTVLSVALLKNMVRSLLQVVGASGSSSSSLDDESDGYPE 60

Query: 61  EN--RRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHF 120
           EN   RERRISITQFK+L  + +G             ECCVCLC FEADEEVSELSCKHF
Sbjct: 61  ENIKARERRISITQFKSLCHTSDGSGS----GWANTVECCVCLCGFEADEEVSELSCKHF 120

Query: 121 FHKACLSKWFDNKHFTCPLCRSI 138
           FHK CL KWFDNKH TCPLCRSI
Sbjct: 121 FHKVCLEKWFDNKHSTCPLCRSI 137

[Close]
BLAST of Cucsa.286560 vs. TrEMBL
Match: M5XHD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013029mg PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-38
Identity = 90/145 (62.07%), Postives = 104/145 (71.72%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDW---- 60
           MGLSNFP +AEGVL  PVLVMNTV+S+A LKN VRSV+Q+M A+ NS S EE  D     
Sbjct: 1   MGLSNFPSAAEGVL--PVLVMNTVLSVALLKNMVRSVLQVMGANVNSQSFEENPDGCPAE 60

Query: 61  ENRRERRISITQFKTLGQS-FNGETEEEFVSRCVMA--ECCVCLCRFEADEEVSELSCKH 120
              RERRISI+QFK+L  S  N       V++      ECCVCLC FEA++EVSELSCKH
Sbjct: 61  MIARERRISISQFKSLCHSNSNSRPNNTCVAKTNSGAMECCVCLCGFEAEQEVSELSCKH 120

Query: 121 FFHKACLSKWFDNKHFTCPLCRSIE 139
           FFHK CL KWFDN H TCPLCRS++
Sbjct: 121 FFHKGCLEKWFDNNHSTCPLCRSVD 143

[Close]
BLAST of Cucsa.286560 vs. TrEMBL
Match: A0A067JRV9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17849 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.2e-38
Identity = 85/140 (60.71%), Postives = 101/140 (72.14%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEE---EYDWE 60
           MGLS+FP +AEGVL  P+LVMNTV+S+A LKN VRS++Q++ A+      E+   E+  E
Sbjct: 1   MGLSSFPSAAEGVL--PILVMNTVLSVALLKNMVRSLLQVVGANWIPQDYEQDPDEFPRE 60

Query: 61  NRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHK 120
           N R R ISITQFK+L    NG       SR  + ECCVCLC FEA+EEVSELSCKHFFH+
Sbjct: 61  NARMRTISITQFKSLTPHSNGGGSCSGGSRGAIVECCVCLCGFEAEEEVSELSCKHFFHR 120

Query: 121 ACLSKWFDNKHFTCPLCRSI 138
            CL KW DNKH TCPLCRSI
Sbjct: 121 GCLDKWIDNKHSTCPLCRSI 138

[Close]
BLAST of Cucsa.286560 vs. TrEMBL
Match: A0A067H3V9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039522mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSS--EEEYDW-- 60
           MGLSNFP +AEG  LLP LVMNTV+S+A LKN VRS++Q M A+ +SSSS  E+E D   
Sbjct: 1   MGLSNFPSAAEG--LLPGLVMNTVLSVALLKNMVRSLLQGMGAASDSSSSNVEDESDGFI 60

Query: 61  ------ENRRERRISITQFKTLGQSFNGETEEEFVSR-----CVMA-ECCVCLCRFEADE 120
                 +N RERRIS+TQFK+L  S +  +     S      C  A ECCVCL RF++DE
Sbjct: 61  SSNSEDDNARERRISVTQFKSLCDSRSSSSSTVARSNGGSTSCSAAMECCVCLSRFQSDE 120

Query: 121 EVSELSCKHFFHKACLSKWFDNKHFTCPLCRSI 138
           EVSELSCKHFFH+ CL KWFDNKH TCPLCRSI
Sbjct: 121 EVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSI 151

[Close]
BLAST of Cucsa.286560 vs. TAIR10
Match: AT1G67856.1 (AT1G67856.1 RING/U-box superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 8.7e-35
Identity = 73/140 (52.14%), Postives = 102/140 (72.86%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS-SSEEEYDWEN- 60
           MG+S++P ++EGV+  P+LVMNTV+S++ +KN VRSV+ M+S+  N + + E++ D E+ 
Sbjct: 1   MGISHYPTASEGVM--PMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDHEDS 60

Query: 61  RRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSEL-SCKHFFHK 120
           +R RRISIT F++L ++     E E +      +CCVCLC F+ +EEVSEL SCKH+FH 
Sbjct: 61  KRRRRISITHFESLCENRGSRNEREAM------DCCVCLCGFKEEEEVSELVSCKHYFHS 120

Query: 121 ACLSKWFDNKHFTCPLCRSI 138
           ACL KWF N H TCPLCRSI
Sbjct: 121 ACLDKWFGNNHTTCPLCRSI 132

[Close]
BLAST of Cucsa.286560 vs. TAIR10
Match: AT1G24580.1 (AT1G24580.1 RING/U-box superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 8.5e-30
Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 1 

Query: 21  MNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGET 80
           MNTV+S+  LKN VRSV Q++++   SS   ++   ++   RRISITQFK+L ++   E 
Sbjct: 1   MNTVVSITLLKNMVRSVFQIVASETESSMEIDDEPEDDFVTRRISITQFKSLCENIEEEE 60

Query: 81  EEEFVSRCVMAECCVCLCRFEADEEVSEL-SCKHFFHKACLSKWFDNKHFTCPLCRSI 138
           EE+ V      ECCVCLC F+ +EEVSEL SCKHFFH+ACL  WF N H TCPLCRSI
Sbjct: 61  EEKGV------ECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSI 112

[Close]
BLAST of Cucsa.286560 vs. TAIR10
Match: AT2G04240.1 (AT2G04240.1 RING/U-box superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V+++NT +S++ +K  VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NRRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q ++  + F   T     E + RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

[Close]
BLAST of Cucsa.286560 vs. TAIR10
Match: AT2G01150.1 (AT2G01150.1 RING-H2 finger protein 2B)

HSP 1 Score: 62.0 bits (149), Expect = 3.3e-10
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           ++C VCL + +  EEV +L C+H FHK CL  W  + +F CPLCRS
Sbjct: 72  SDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 117

[Close]
BLAST of Cucsa.286560 vs. TAIR10
Match: AT3G61460.1 (AT3G61460.1 brassinosteroid-responsive RING-H2)

HSP 1 Score: 61.2 bits (147), Expect = 5.7e-10
Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 1 

Query: 14  LLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLG 73
           + LP L + T+  + F++  V S+ + +   G S   E +  W +       I + ++  
Sbjct: 10  VFLPKLFVQTLSILGFIRTIVFSIFRFL---GLSDFLEMDQTWPDYTSYPTRIPETRS-- 69

Query: 74  QSFNGETEEEFVSRCVMAE-----------CCVCLCRFEADEEVSEL-SCKHFFHKACLS 133
             F+     E +      E           C VCL  FE ++E+  L +C+H FH++CL 
Sbjct: 70  -PFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLD 129

Query: 134 KWFDNKHFTCPLCRS 137
           +W D+   TCPLCR+
Sbjct: 130 RWMDHDQKTCPLCRT 138

[Close]
BLAST of Cucsa.286560 vs. NCBI nr
Match: gi|778704905|ref|XP_011655602.1| (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-74
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60
           MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

[Close]
BLAST of Cucsa.286560 vs. NCBI nr
Match: gi|590695189|ref|XP_007044820.1| (RING/U-box superfamily protein [Theobroma cacao])

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40
Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEE----YDW 60
           MGLSNFP +AEGVL  PVLVMNTV+S+A LKN VRS++Q++ ASG+SSSS ++    Y  
Sbjct: 1   MGLSNFPSAAEGVL--PVLVMNTVLSVALLKNMVRSLLQVVGASGSSSSSLDDESDGYPE 60

Query: 61  EN--RRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHF 120
           EN   RERRISITQFK+L  + +G             ECCVCLC FEADEEVSELSCKHF
Sbjct: 61  ENIKARERRISITQFKSLCHTSDGSGS----GWANTVECCVCLCGFEADEEVSELSCKHF 120

Query: 121 FHKACLSKWFDNKHFTCPLCRSI 138
           FHK CL KWFDNKH TCPLCRSI
Sbjct: 121 FHKVCLEKWFDNKHSTCPLCRSI 137

[Close]
BLAST of Cucsa.286560 vs. NCBI nr
Match: gi|296081356|emb|CBI16789.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 91/144 (63.19%), Postives = 104/144 (72.22%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSS-----SEEEYD 60
           MGLSNF   AEGVL  PVLVMNTVMS+A LKN VRSV+Q+M A+G+S +     S EEY 
Sbjct: 1   MGLSNFHSPAEGVL--PVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYS 60

Query: 61  --WENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKH 120
              EN +ERR+S+TQFK+L  S    T       C   +CCVCLCRFEA+EEVSELSCKH
Sbjct: 61  PMSENAKERRVSVTQFKSLSHSSGTGT-----GWCSSMDCCVCLCRFEAEEEVSELSCKH 120

Query: 121 FFHKACLSKWFDNKHFTCPLCRSI 138
           FFHK C  KWFDNKH +CPLCRSI
Sbjct: 121 FFHKGCWEKWFDNKHSSCPLCRSI 137

[Close]
BLAST of Cucsa.286560 vs. NCBI nr
Match: gi|645230365|ref|XP_008221903.1| (PREDICTED: RING-H2 finger protein ATL47 [Prunus mume])

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-38
Identity = 89/147 (60.54%), Postives = 103/147 (70.07%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDW---- 60
           MGLSNFP +AEGVL  PVLVMNTV+S+A LKN VRSV+Q+M A+ NS S EE  D     
Sbjct: 1   MGLSNFPSAAEGVL--PVLVMNTVLSVALLKNMVRSVLQVMGANVNSQSFEENQDGCPAE 60

Query: 61  ENRRERRISITQFKTLGQSFNGETEEEFVSRCVMA-----ECCVCLCRFEADEEVSELSC 120
              RERRISI+QFK+L  S +        +R         ECCVCLC FEA++EVSELSC
Sbjct: 61  MIARERRISISQFKSLCHSNSNSNSRPNNTRVAKTNSWAMECCVCLCGFEAEQEVSELSC 120

Query: 121 KHFFHKACLSKWFDNKHFTCPLCRSIE 139
           KHFFHK CL KWFDN H TCPLCRS++
Sbjct: 121 KHFFHKGCLEKWFDNNHSTCPLCRSVD 145

[Close]
BLAST of Cucsa.286560 vs. NCBI nr
Match: gi|596202066|ref|XP_007223707.1| (hypothetical protein PRUPE_ppa013029mg [Prunus persica])

HSP 1 Score: 166.0 bits (419), Expect = 4.7e-38
Identity = 90/145 (62.07%), Postives = 104/145 (71.72%), Query Frame = 1 

Query: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDW---- 60
           MGLSNFP +AEGVL  PVLVMNTV+S+A LKN VRSV+Q+M A+ NS S EE  D     
Sbjct: 1   MGLSNFPSAAEGVL--PVLVMNTVLSVALLKNMVRSVLQVMGANVNSQSFEENPDGCPAE 60

Query: 61  ENRRERRISITQFKTLGQS-FNGETEEEFVSRCVMA--ECCVCLCRFEADEEVSELSCKH 120
              RERRISI+QFK+L  S  N       V++      ECCVCLC FEA++EVSELSCKH
Sbjct: 61  MIARERRISISQFKSLCHSNSNSRPNNTCVAKTNSGAMECCVCLCGFEAEQEVSELSCKH 120

Query: 121 FFHKACLSKWFDNKHFTCPLCRSIE 139
           FFHK CL KWFDN H TCPLCRS++
Sbjct: 121 FFHKGCLEKWFDNNHSTCPLCRSVD 143

The following BLAST results are available for this feature:
BLAST of Cucsa.286560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
XERIC_ARATH3.5e-1735.81Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana GN=XERICO PE... [more]
RHA2B_ARATH5.9e-0950.00E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2[more]
RING4_ARATH1.5e-0748.89E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ... [more]
AIP2_ARATH7.2e-0742.86E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1[more]
RN181_DANRE9.5e-0752.27E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2 SV=2[more]
BLAST of Cucsa.286560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTI8_CUCSA7.4e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598060 PE=4 SV=1[more]
A0A061E8K8_THECC9.1e-4165.73RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010559 PE=4 SV=1[more]
M5XHD4_PRUPE3.2e-3862.07Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013029mg PE=4 SV=1[more]
A0A067JRV9_JATCU7.2e-3860.71Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17849 PE=4 SV=1[more]
A0A067H3V9_CITSI1.2e-3760.13Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039522mg PE=4 SV=1[more]
BLAST of Cucsa.286560 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67856.18.7e-3552.14 RING/U-box superfamily protein[more]
AT1G24580.18.5e-3055.08 RING/U-box superfamily protein[more]
AT2G04240.12.0e-1835.81 RING/U-box superfamily protein[more]
AT2G01150.13.3e-1050.00 RING-H2 finger protein 2B[more]
AT3G61460.15.7e-1027.41 brassinosteroid-responsive RING-H2[more]
BLAST of Cucsa.286560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778704905|ref|XP_011655602.1|1.1e-74100.00PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus][more]
gi|590695189|ref|XP_007044820.1|1.3e-4065.73RING/U-box superfamily protein [Theobroma cacao][more]
gi|296081356|emb|CBI16789.3|1.1e-3963.19unnamed protein product [Vitis vinifera][more]
gi|645230365|ref|XP_008221903.1|1.6e-3860.54PREDICTED: RING-H2 finger protein ATL47 [Prunus mume][more]
gi|596202066|ref|XP_007223707.1|4.7e-3862.07hypothetical protein PRUPE_ppa013029mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.286560.1Cucsa.286560.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 92..135
score: 4.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 93..134
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 93..135
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 91..136
score: 1.8
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 13..136
score: 2.6
NoneNo IPR availablePANTHERPTHR14155:SF102RING ZINC FINGER-CONTAINING PROTEINcoord: 13..136
score: 2.6
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 92..136
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.286560Cla010037Watermelon (97103) v1cgywmB524
Cucsa.286560Csa5G598060Cucumber (Chinese Long) v2cgycuB410
Cucsa.286560MELO3C011942Melon (DHL92) v3.5.1cgymeB474
Cucsa.286560ClCG05G025820Watermelon (Charleston Gray)cgywcgB498
Cucsa.286560CSPI05G22190Wild cucumber (PI 183967)cgycpiB432
Cucsa.286560CmaCh04G017740Cucurbita maxima (Rimu)cgycmaB0802
Cucsa.286560CmoCh04G018660Cucurbita moschata (Rifu)cgycmoB0794
Cucsa.286560CmoCh18G007660Cucurbita moschata (Rifu)cgycmoB0790
Cucsa.286560Lsi04G005990Bottle gourd (USVL1VR-Ls)cgylsiB465
Cucsa.286560Cp4.1LG09g05450Cucurbita pepo (Zucchini)cgycpeB0744
Cucsa.286560Cp4.1LG01g15710Cucurbita pepo (Zucchini)cgycpeB0751
Cucsa.286560MELO3C011942.2Melon (DHL92) v3.6.1cgymedB471
Cucsa.286560CsaV3_5G031030Cucumber (Chinese Long) v3cgycucB441
Cucsa.286560Cla97C05G108050Watermelon (97103) v2cgywmbB498
Cucsa.286560Bhi07G001441Wax gourdcgywgoB581
Cucsa.286560Carg14307Silver-seed gourdcarcgyB0288
Cucsa.286560Carg14502Silver-seed gourdcarcgyB0815
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.286560Silver-seed gourdcarcgyB0575
Cucsa.286560Silver-seed gourdcarcgyB0698
Cucsa.286560Cucumber (Chinese Long) v3cgycucB437
Cucsa.286560Watermelon (97103) v2cgywmbB501
Cucsa.286560Wax gourdcgywgoB576
Cucsa.286560Cucumber (Gy14) v1cgycgyB139
Cucsa.286560Cucurbita maxima (Rimu)cgycmaB0808
Cucsa.286560Cucurbita maxima (Rimu)cgycmaB0799
Cucsa.286560Cucurbita moschata (Rifu)cgycmoB0786
Cucsa.286560Cucurbita moschata (Rifu)cgycmoB0801
Cucsa.286560Wild cucumber (PI 183967)cgycpiB429
Cucsa.286560Cucumber (Chinese Long) v2cgycuB407
Cucsa.286560Melon (DHL92) v3.5.1cgymeB479
Cucsa.286560Watermelon (Charleston Gray)cgywcgB501
Cucsa.286560Cucurbita pepo (Zucchini)cgycpeB0746
Cucsa.286560Cucurbita pepo (Zucchini)cgycpeB0764
Cucsa.286560Bottle gourd (USVL1VR-Ls)cgylsiB468
Cucsa.286560Melon (DHL92) v3.6.1cgymedB477