Cla011663 (gene) Watermelon (97103) v1

Overview
NameCla011663
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionThioredoxin-like 5 (AHRD V1 ***- A6N1I7_ORYSI); contains Interpro domain(s) IPR013766 Thioredoxin domain
LocationChr4 : 5706090 .. 5710274 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTTTTGGGTGCAAGTAGTTCTCAGATTCTGTACAGACAACTCCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGGGTTCTTGGAGATCTGCGGCGGAGGGAGCTGAGGATCAAGGCGGAGGCTGGGTTTTGGCCGGACTTATCGCGTCCGGAGGCGGTGGAGATGGAGTCCATTGACGATTCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTATTTCTCTATCTTCCATTCCGTACCAAGGGTTTTTTCGTAATTTCACCTTTTTTTTTTCTTAATTACAAATTTAGTCTTGTAATTTAATTTATATGGTCTAGGATTTCAAATTAGTTTTTGTGGTTAGTGTTTTTGTTTTTTAGTTTTCTAAATTTGTTTTCTTTCTTGCCAAATTCAACATTTTAGTGGTGTATATTTGAGCTCGATTTAGTTTCTTCGTTGTGTTTTCAAAATCCAAGTCAAGTTTTGAAGATTTGTTTATGGTTTTTTAAATATTTGAGGGTGACTTATAAAATTATTAAAATCACTTTTGTTATTTTCAAGACCGATTCAAAAATTTTTATTAATTCAAAATCAATTTTAATAATATGAAAATTAGGTTGAAAAGTATAAAATGAAATATTGAATTGATTTCAATAATTAAATATGTGTTTTAAAAAAGTTTTAAATATGATAAAAGTGATTAACCTATTTCTTTTTATCCTTTTATAATATGATTAAGAATTGAAATATTTAGTAAGAAAAAGATGGAATTTTTATGAGCAATTTTCAAAAATAAAATGATTGGTTAAGTCTTTTAAGTTTTTGTATTCATCATTGTAATAAATTAAGTATCTGATATGATTGAACAAATGGGCAAATAGGATGGCAACTTGGTGTAGGAAATGCATATACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATGTTACCAAGTAACTCTTCCATGCTATCTCCTAAGTCTTACAAAATAAATCTTAATTTTAAGATATACTTCTTAGGAAAAAATATCTTTTTTTTCGAAAAATTATTATGAATAGAAAAAATATTAAACTATTTACAAATATAAAAAAATTTCACTTTCTATTAGTGATAGATTGCGATAGACTTCTATAACTAAACAATCTATTGCCGAGTGATAGAAGTCTACCGTGGTCTATCGCTGATTAACAGTGAATACTATATATATTTGAAAACAACCATTTTTTTAGTCTCTAGATTTTGGATTTAGTTTGAAAATGTTGCATTTTTAATCTTAAGTTTTGAGTTTGCTTTCATTTTAGCTTCTAGATTTCAGAATTTTACAATTTTATCGTGAGATTTGAGTTTTGTTTTAATTTAGTTTCGAGATTTCAATATTTATGCTTTTAACCTTATTTTTCACTAAATACTTCCTTTTAGTCCTTAGTGTTAATCATTAATTAATTCAAAATAACAAAAAGAATTCTAATGAATTGAGTTTCACAATCTTTTATCACTACAAAAATAAATTTCAATTTCAATTCATAATTATTTTAAATTAATTAATAGAAATTAGCACCAATGACTTGAGAGAGTATTTTGTGTAATAAAAATAAATAAAAAATAAAAAATAAAATCGAAGTTAAGAGTGTAAATCTTGAAACCTATAAACAAAATTGAAAAAATACTCAAATCTCAAGAATAAAATTGTAACATTTTGAAACTTAGAGATTAAATTAAAATCAAATTCAAAACGTAACAACTAAAATGTAATATTTTGATTTTATATGCACAAATAATTTACATACTAATTATTGTGAACAAATAAATATTTCAGAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAGCATCTCAGTAAGTATATTCTATAAGTCCTTTTTTGAGCTTCTTCGAATGGTCAGAAATAACTCTTTTTTCTAAAATTCATTAAAATAATATTTTTTTAGTTTATCTCGGCGGGGATCAACACCAAAATTTAGATAAAAAGTTAACTTTTTTGTAACTTATCGATTGTTTTGGACTTTTTGAGATATATTTCGGTCAAATTTTCTCCAAATTAAGTTAGCTTTACCAAATATTATATCAAATCTTTAGCCCAATTTATGTTTCCACAATTATCTAAATTTTTAAATCTACAAATGAATTTTTTAGATGGATCTGAAGTGATGGACTTGTGATTTTTAAAATTTAGAAAAGACAAATTTTGTGAATTAAATAAGATATGAGAAATATATAGAATCTCGACGTTACTTTCTCAACATTAATATTGAGATTTTATATATTTCTCAAATCTACTGAATTTTGTACGAAAATTTATCTTTTTGAAAAATTTAAGAATGCAATCACTTGATCCACTTAGAAAATCTATTTACTTAATTGGTAAAGTCATTTAGCAATTTGGAAATTCTTATAACCGTGGAAATAGAAATTAGGCTAAAGATTTGAAGAATTAGGTAAGTTTGATATAATATTTGGTAAAGATAACCGAATTTAGAGAAAATTTGAAAAGATATAAGATTTGGTATAAGATTCAAGAAGATTACATAATATTTGAAAAAATTAGTAGAATCTCGGTGGTACTACCCGAGAACACAAACCCATCGATGAGTTAGAACAAGTTATCTTCTTATTAAATGTTTGTGGTTGATCTTGGCCGAGATGGACCAAAAGAAAAACTATTTTAATGTTTTTTTTCAAAAAATGCTAGTTTTGAAAGATCGAAACTTGCAAGTGCTATTTCTGACCATTTTCCTAACTTTTTTCTAATTATGTTTGTTTGACAATTCATGTATTTTCTCATTCTGCAGAAAATGCCAACAATTCAGGTGACCACATTTTATTAATTCTCACTTTGACATGAATTTTGACACAAAAAAAAAAAAAAATTGCTTATAGGTCGTATTTTTTTCGGTTAAAATATTATTTTCGTCTATATATTTTAGGACTTATTCTATTTTAGTTCATATATTTTTAAATATTCAAATTTTGGCCCTATACTTTTAAAAGATCTTTAAAATAGTCATTTGTAGACTAGTAGTAAGACTTTTCATGCAGGAAAGTCACAATGTGGATATGTTTACAAAGATTTATAGATGAAAGACTAATTAACTTTTTTTGAAAAAAAATAATAATGGCCATAAGTTAGTAGTATGGATTAATTTTAAGGTTTCTTAGAAAGTATTTAGCTATATGAAAGTACATGAATCAAATAGGACAAGTCCCAAAGTAGTTTAAAATAATATTTTGATCCATTACTTTTAGGTAATATTTTTATGAAAATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAAGATTTATTGAAAGTCACATGAATTTTTTTAGGACAAAATAAAATGAAATTTAAACTATATGTATAAAGACCAAATGCTTAAGCCAAAAGCACTTTTTGTACTTCCTAACAAAACTATTCTAAGTGCACGTTTGAAAGCTATGGATCAAGTCGTAATTTTTTTTATTTAAAAAAAAAAAGAAAAAAAAAAGAGAGAAATTTAGGTACAAAGTACAAATTGATTTTCATATAAACGGTTGATGTTTGGTTTCAAACTCTTAAAACGATTCATATATTTAAAAGTAATTTTTAGTTATTAGTTTGGTGTGAGAAGTGATTTTAAAATTACCAAATTACTAAAAAGTGATTTCACTATAGGGGCAAATTTGGTATTTTTGCAAAATCTTATGGTGATTTCTAATCAATCACACCATCAAGCGTCATCTCTCAACTAATTATTGAAAAATCAATTTTAAATAATTTAAATTTTCTTGAATCAATTTCAACATATGCCAACTATCAATATTTCACTAGAAATTGAATTTGACAATGGTACAATTGATTTTTTTTCTCTTTTTAGGGAGAAGTACTTTTGAGTTTTGTTTAAGTACTCTCAAACATTGGCTTTCAATTTTCGAGAGTGATACAAATGAGTTGTTCATATTTTTTTTATAAAATTATTTATTAGCTCTGGAAAGATGGAGAAATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCATAAGTTTGTTTCATAA

mRNA sequence

ATGTCTGTTTTGGGTGCAAGTAGTTCTCAGATTCTGTACAGACAACTCCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGGGTTCTTGGAGATCTGCGGCGGAGGGAGCTGAGGATCAAGGCGGAGGCTGGGTTTTGGCCGGACTTATCGCGTCCGGAGGCGGTGGAGATGGAGTCCATTGACGATTCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATATACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAGCATCTCACTCTGGAAAGATGGAGAAATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCATAAGTTTGTTTCATAA

Coding sequence (CDS)

ATGTCTGTTTTGGGTGCAAGTAGTTCTCAGATTCTGTACAGACAACTCCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGGGTTCTTGGAGATCTGCGGCGGAGGGAGCTGAGGATCAAGGCGGAGGCTGGGTTTTGGCCGGACTTATCGCGTCCGGAGGCGGTGGAGATGGAGTCCATTGACGATTCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATATACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAGCATCTCACTCTGGAAAGATGGAGAAATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCATAAGTTTGTTTCATAA

Protein sequence

MSVLGASSSQILYRQLHQHQILSNGKRCFLNTDFGVLGDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISLWKDGEMKAEVIGGHKAWLVIEEVREMIHKFVS
Homology
[Close]
BLAST of Cla011663 vs. Swiss-Prot
Match: TRL31_ARATH (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 101/186 (54.30%), Postives = 128/186 (68.82%), Query Frame = 1 

Query: 6   ASSSQILYRQLH--------QHQILSNGKRC------FLNTDFGVLGDLRRRELRIKAEA 65
           AS+ Q+L RQ H        + + L+  K+C      + N   G       +E R+KA  
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLG--RSHMEKEWRLKA-- 89

Query: 66  GFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLA 125
            FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLA
Sbjct: 90  -FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLA 149

Query: 126 ADYVTKVKFYYVDVNKVPQSLVKRGSIS------LWKDGEMKAEVIGGHKAWLVIEEVRE 172
           A+Y  + KFYYVDVNKVPQ+LVKRG+IS      LWK+ EMK EVIGGHK WLVIEEVRE
Sbjct: 150 AEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRE 209

[Close]
BLAST of Cla011663 vs. Swiss-Prot
Match: TRL31_ORYSJ (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 5.8e-38
Identity = 85/141 (60.28%), Postives = 104/141 (73.76%), Query Frame = 1 

Query: 38  GDLRRREL---RIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMA 97
           G  RRRE     ++AEA FW D+S+P  VEME ID  + LD  L  + +  QPI+IDWMA
Sbjct: 55  GKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMA 114

Query: 98  TWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSIS------LWKDGEMKA 157
           +WCRKCIYLKP+LEK+A ++   V+FY+VDVNKVPQ++VKRG+I+      LWKDGE  A
Sbjct: 115 SWCRKCIYLKPRLEKIAGEF-PGVRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDGEWAA 174

Query: 158 EVIGGHKAWLVIEEVREMIHK 170
           EVIGGHKAWLV++EVREMI K
Sbjct: 175 EVIGGHKAWLVMDEVREMIQK 191

[Close]
BLAST of Cla011663 vs. Swiss-Prot
Match: TRL32_ARATH (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 1 

Query: 32  TDFGVLGDLRRRELRIKAEAGFWPDLS-RPEAVEMESIDDSDHLDRILIHAQQLSQPILI 91
           TD   L   R R + I+ + G   +L   P +VE+  I    H D+++  AQ+L + ++I
Sbjct: 44  TDKICLAAERIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVI 103

Query: 92  DWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRG------SISLWKDG 151
            WMA WCRKCIYLKPKLEKLAA++  +++FY+VDVN VP  LV R       +I LW+DG
Sbjct: 104 VWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDG 163

Query: 152 EMKAEVIGGHKAWLVIEEVREMI 168
           + +AEVIGGHKA  V+ EVREMI
Sbjct: 164 QKQAEVIGGHKAHFVVNEVREMI 186

[Close]
BLAST of Cla011663 vs. Swiss-Prot
Match: THIO2_CORNE (Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 4.5e-06
Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = 1 

Query: 87  PILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRG-----SISLW 146
           P+L+D+ A WC  C  + P LE+L+ +Y  KVK   VDV     + VK       ++ ++
Sbjct: 23  PVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKYNIRNIPALLMF 82

Query: 147 KDGEMKAEVIG 153
           KDGE+ A+ +G
Sbjct: 83  KDGEVVAQQVG 93

[Close]
BLAST of Cla011663 vs. Swiss-Prot
Match: THIO_RICBR (Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 7.6e-06
Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 87  PILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRG-----SISLW 146
           P+L+D+ A WC  C  L P +E+++ D  +KVK   +++++ P+   K G     ++ L+
Sbjct: 20  PVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPSKYGIRSIPTVMLF 79

Query: 147 KDGEMKAEVIGGHKAWLVIEEVREMI 168
           K+GE K   +G H+   +IE +   I
Sbjct: 80  KNGEQKDTKVGLHQKNSLIEWINNNI 105

[Close]
BLAST of Cla011663 vs. TrEMBL
Match: A0A0A0KZ53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.3e-76
Identity = 151/179 (84.36%), Postives = 156/179 (87.15%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 60
           MSVLGAS+S ILY  LHQH  L+N KRC FL+TDFG   D RRRELRIKAEAGFWPDLSR
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFG---DHRRRELRIKAEAGFWPDLSR 60

Query: 61  PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120
           P +VEMESIDDSD LDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK K
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAK 120

Query: 121 FYYVDVNKVPQSLVKRGSIS------LWKDGEMKAEVIGGHKAWLVIEEVREMIHKFVS 173
           FYYVDVNKVPQSLVKRG+IS      LWKDGEMKAEVIGGHKAWLVIEEVREMI KF S
Sbjct: 121 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]
BLAST of Cla011663 vs. TrEMBL
Match: W9SW93_9ROSA (Thioredoxin-like 3-1 OS=Morus notabilis GN=L484_028031 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 123/185 (66.49%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQ-----HQIL---SNGKRCFLNTDFGVLGDLRRRELR------ 60
           MSVL A+SSQIL+R+ H      HQ L   S     F     G  GD R RE +      
Sbjct: 1   MSVL-AASSQILWREFHHRDHHHHQQLCASSGNYSFFAGKSGGFWGDFRNREDKKTSKRD 60

Query: 61  IKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPK 120
           ++AEA FWPDLS+P +VEME I+D DHLDRIL HAQ++SQPILIDWMA+WCRKCIYLKPK
Sbjct: 61  MRAEA-FWPDLSKPASVEMEPINDCDHLDRILSHAQEISQPILIDWMASWCRKCIYLKPK 120

Query: 121 LEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISLWKDGEMKAEVIGGHKAWLVIEEVREM 172
           LEKLAADY TK+KFY VDVNKVPQ LVKRG+I++WKDGEMKAEVIGGHKAW+VI EV EM
Sbjct: 121 LEKLAADYDTKIKFYCVDVNKVPQDLVKRGNITIWKDGEMKAEVIGGHKAWIVINEVTEM 180

[Close]
BLAST of Cla011663 vs. TrEMBL
Match: A0A0D2TLN6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G099700 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-55
Identity = 118/191 (61.78%), Postives = 141/191 (73.82%), Query Frame = 1 

Query: 1   MSVLGASS---SQILYRQLHQHQILSNGKRCFLNTDFGVLGD-----------LRRRELR 60
           MSVL A+S   S+ +Y++  Q Q+ +NG   F   + G  G            +R RE R
Sbjct: 1   MSVLAANSQILSREIYQRYQQQQLWNNGSCLFSPKNSGYFGSDWKDRKWKNKTVRSREWR 60

Query: 61  IKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPK 120
           ++A    WPDLSRP A+EME+I+DSDHLD+IL  A+QLSQPI+IDWMA WCRKCIYLKPK
Sbjct: 61  VQA---LWPDLSRPSAIEMETINDSDHLDQILARARQLSQPIIIDWMAAWCRKCIYLKPK 120

Query: 121 LEKLAADYVTKVKFYYVDVNKVPQSLVKRGSIS------LWKDGEMKAEVIGGHKAWLVI 172
           LEKLAA++ TK+KFYYVDVNKVPQ+LVKRG+IS      LWKDGEMK EVIGGHKAWLV 
Sbjct: 121 LEKLAAEFDTKIKFYYVDVNKVPQALVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLVT 180

[Close]
BLAST of Cla011663 vs. TrEMBL
Match: A0A0L9U7P2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g223500 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.2e-55
Identity = 118/184 (64.13%), Postives = 137/184 (74.46%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQH-----QILSNGKRCFLNTDFGVLGDL----RRRELRIKAE- 60
           MSV+GA S Q LY +++Q      Q L +G+        G  G++    R+RE ++K   
Sbjct: 1   MSVIGACS-QFLYGEVYQRDEQWAQCLVSGRGYLFCRRSGGCGNIWVGSRKRERKMKRRN 60

Query: 61  ---AGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKL 120
                 WPDLS+P  VEME I DSDHLD+IL+ A   SQPILIDWMATWCRKCIYLKPKL
Sbjct: 61  FRVEAMWPDLSKPSEVEMEEITDSDHLDQILLLAHDNSQPILIDWMATWCRKCIYLKPKL 120

Query: 121 EKLAADYVTKVKFYYVDVNKVPQSLVKRGSISLWKDGEMKAEVIGGHKAWLVIEEVREMI 172
           EKLAA+Y+ KVKFYYVDVNKVPQ+LVKRG+ISLWKDGEMKAEVIGGHKAWLV EEVREMI
Sbjct: 121 EKLAAEYLDKVKFYYVDVNKVPQTLVKRGNISLWKDGEMKAEVIGGHKAWLVTEEVREMI 180

[Close]
BLAST of Cla011663 vs. TrEMBL
Match: A0A067FU65_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029703mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-54
Identity = 114/187 (60.96%), Postives = 138/187 (73.80%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQHQ----------------ILSNGKRCFLNTDFGVLGDLRRRE 60
           M+ L A SS ILY++LH+ +                +L      F   D        RR+
Sbjct: 1   MTALAAKSS-ILYQELHRREGKQQFQQPWSSGSSSCLLLQKNSAFFWVDTASRSKSARRD 60

Query: 61  LRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLK 120
           +R++A    WPDLSRP +VE+E I+DSDHLD+IL+ AQ+LSQPILIDWMA+WCRKCIYLK
Sbjct: 61  VRVEA---LWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLK 120

Query: 121 PKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISLWKDGEMKAEVIGGHKAWLVIEEVR 172
           PKLEKLAA++ TK+KFYYVDVNKV + LVKRG+IS+WKDGEMK+EVIGGHKAWLVIEEVR
Sbjct: 121 PKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISIWKDGEMKSEVIGGHKAWLVIEEVR 180

[Close]
BLAST of Cla011663 vs. NCBI nr
Match: gi|659083001|ref|XP_008442136.1| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 3.6e-80
Identity = 158/179 (88.27%), Postives = 160/179 (89.39%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 60
           M VLGASSS ILY QLHQHQ LSNGKRC FLNTDFG   D RRRELRIKAEAGFWPDLSR
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFG---DHRRRELRIKAEAGFWPDLSR 60

Query: 61  PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120
           P +VEMESIDDSD LDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120

Query: 121 FYYVDVNKVPQSLVKRGSIS------LWKDGEMKAEVIGGHKAWLVIEEVREMIHKFVS 173
           FYYVDVNKVPQSLVKRG+IS      LWKDGEMKAEVIGGHKAWLVIEEVREMI KF S
Sbjct: 121 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]
BLAST of Cla011663 vs. NCBI nr
Match: gi|700199630|gb|KGN54788.1| (hypothetical protein Csa_4G496780 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76
Identity = 151/179 (84.36%), Postives = 156/179 (87.15%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQHQILSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSR 60
           MSVLGAS+S ILY  LHQH  L+N KRC FL+TDFG   D RRRELRIKAEAGFWPDLSR
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFG---DHRRRELRIKAEAGFWPDLSR 60

Query: 61  PEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120
           P +VEMESIDDSD LDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK K
Sbjct: 61  PASVEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAK 120

Query: 121 FYYVDVNKVPQSLVKRGSIS------LWKDGEMKAEVIGGHKAWLVIEEVREMIHKFVS 173
           FYYVDVNKVPQSLVKRG+IS      LWKDGEMKAEVIGGHKAWLVIEEVREMI KF S
Sbjct: 121 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]
BLAST of Cla011663 vs. NCBI nr
Match: gi|778694930|ref|XP_004146393.2| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 136/158 (86.08%), Postives = 140/158 (88.61%), Query Frame = 1 

Query: 22  LSNGKRC-FLNTDFGVLGDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIH 81
           L+N KRC FL+TDFG   D RRRELRIKAEAGFWPDLSRP +VEMESIDDSD LDRILIH
Sbjct: 42  LTNAKRCSFLSTDFG---DHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIH 101

Query: 82  AQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSIS- 141
           AQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK KFYYVDVNKVPQSLVKRG+IS 
Sbjct: 102 AQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAKFYYVDVNKVPQSLVKRGNISK 161

Query: 142 -----LWKDGEMKAEVIGGHKAWLVIEEVREMIHKFVS 173
                LWKDGEMKAEVIGGHKAWLVIEEVREMI KF S
Sbjct: 162 MPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 196

[Close]
BLAST of Cla011663 vs. NCBI nr
Match: gi|703156089|ref|XP_010111374.1| (Thioredoxin-like 3-1 [Morus notabilis])

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 123/185 (66.49%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQLHQ-----HQIL---SNGKRCFLNTDFGVLGDLRRRELR------ 60
           MSVL A+SSQIL+R+ H      HQ L   S     F     G  GD R RE +      
Sbjct: 1   MSVL-AASSQILWREFHHRDHHHHQQLCASSGNYSFFAGKSGGFWGDFRNREDKKTSKRD 60

Query: 61  IKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWCRKCIYLKPK 120
           ++AEA FWPDLS+P +VEME I+D DHLDRIL HAQ++SQPILIDWMA+WCRKCIYLKPK
Sbjct: 61  MRAEA-FWPDLSKPASVEMEPINDCDHLDRILSHAQEISQPILIDWMASWCRKCIYLKPK 120

Query: 121 LEKLAADYVTKVKFYYVDVNKVPQSLVKRGSISLWKDGEMKAEVIGGHKAWLVIEEVREM 172
           LEKLAADY TK+KFY VDVNKVPQ LVKRG+I++WKDGEMKAEVIGGHKAW+VI EV EM
Sbjct: 121 LEKLAADYDTKIKFYCVDVNKVPQDLVKRGNITIWKDGEMKAEVIGGHKAWIVINEVTEM 180

[Close]
BLAST of Cla011663 vs. NCBI nr
Match: gi|1012185877|ref|XP_015969425.1| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Arachis duranensis])

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-57
Identity = 127/200 (63.50%), Postives = 143/200 (71.50%), Query Frame = 1 

Query: 1   MSVLGASSSQILYRQL----------HQHQIL---SNGKRCFL----------NTDFGVL 60
           MS  G     ILY ++          HQHQ L   S+G+  FL          N  FG  
Sbjct: 1   MSATGLLYPHILYGEVVVYQRDQQHQHQHQCLVSSSSGRYVFLSSLKSSGGCGNASFGQR 60

Query: 61  GDLRRRELRIKAEAGFWPDLSRPEAVEMESIDDSDHLDRILIHAQQLSQPILIDWMATWC 120
             +RRR LR++A    WPDLSRP  +EMESIDDS+HLD+IL+HAQQ SQPI+IDWMA WC
Sbjct: 61  --IRRRNLRVEAT---WPDLSRPSVIEMESIDDSEHLDQILLHAQQNSQPIIIDWMAAWC 120

Query: 121 RKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGSIS------LWKDGEMKAEVI 172
           RKCIYLKPKLEKLAA+Y TK+KFYYVDVNKVPQ+LVKRG+IS      LWKDGEMKAEVI
Sbjct: 121 RKCIYLKPKLEKLAAEYDTKIKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVI 180

The following BLAST results are available for this feature:
BLAST of Cla011663 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRL31_ARATH1.2e-4654.30Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana GN=WCRKC1 PE=2 SV=3[more]
TRL31_ORYSJ5.8e-3860.28Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774... [more]
TRL32_ARATH3.4e-3048.95Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=1[more]
THIO2_CORNE4.5e-0636.62Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3[more]
THIO_RICBR7.6e-0631.40Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2[more]
BLAST of Cla011663 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ53_CUCSA1.3e-7684.36Uncharacterized protein OS=Cucumis sativus GN=Csa_4G496780 PE=4 SV=1[more]
W9SW93_9ROSA1.3e-5766.49Thioredoxin-like 3-1 OS=Morus notabilis GN=L484_028031 PE=4 SV=1[more]
A0A0D2TLN6_GOSRA1.6e-5561.78Uncharacterized protein OS=Gossypium raimondii GN=B456_012G099700 PE=4 SV=1[more]
A0A0L9U7P2_PHAAN6.2e-5564.13Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g223500 PE=4 SV=1[more]
A0A067FU65_CITSI1.4e-5460.96Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029703mg PE=4 SV=1[more]
BLAST of Cla011663 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083001|ref|XP_008442136.1|3.6e-8088.27PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo][more]
gi|700199630|gb|KGN54788.1|1.8e-7684.36hypothetical protein Csa_4G496780 [Cucumis sativus][more]
gi|778694930|ref|XP_004146393.2|5.3e-6886.08PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis sativus][more]
gi|703156089|ref|XP_010111374.1|1.9e-5766.49Thioredoxin-like 3-1 [Morus notabilis][more]
gi|1012185877|ref|XP_015969425.1|3.2e-5763.50PREDICTED: thioredoxin-like 3-1, chloroplastic [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU06801watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU42462watermelon EST collection version 2.0transcribed_cluster
WMU56322watermelon EST collection version 2.0transcribed_cluster
WMU61225watermelon EST collection version 2.0transcribed_cluster
WMU62493watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011663Cla011663.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU42462WMU42462transcribed_cluster
WMU56322WMU56322transcribed_cluster
WMU06801WMU06801transcribed_cluster
WMU61225WMU61225transcribed_cluster
WMU62493WMU62493transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 41..171
score: 4.8
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 64..134
score: 2.4
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 65..167
score: 1.09
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 83..131
score: 7.3
NoneNo IPR availablePANTHERPTHR10438:SF283THIOREDOXIN-LIKE 3-1, CHLOROPLASTICcoord: 41..171
score: 4.8