MELO3C008932 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008932
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Thioredoxin
Location	chr8 : 21628248 .. 21630218 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGTTGAGGGAGGGGGACCAAAAAGAAAATGTGTGGATGTGGGCCCCCAACTCCCATCCCATCCCATCCCCTCTCACTTTTCTGCTCCTTCACCTTACGGATAAGGACTCCAAAGAAAGAAAAAAAAAAACTTTCCCTTCAACAGTTCCACTCCTTCTACTCTCTCAATTTCAAAGAAATAGAGAGAAAGAAAACCCTAAAAACAGAGAGAGAGAGAGACACAGATATGTATGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACGCACAACTTCACCAACACCAGTTTCTAAGCAACGGGAAGCGTTGTGGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCCGGCTTTTGGCCGGATTTGTCAAGACCAGCGTCGGTGGAAATGGAATCCATTGACGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAACCAATTCTTATTGATTGGTTCGTATAATTTCCTCTATCCTTTCATTCCAAGGGCTTTTTCTGTAATTTCCTCCTCTCTCTCTCTCTCTTGAAATTACAAATTTAATCTTTTATTTTATTTTATATGGCTTAGGATTTCTAATTGGTGATTTTGTTTTTAGTTAACTGAATTTGGTTTTTTCCCTATCAAATTCAACATTTTAATAATAATAATAATAATAATAATAATATGTATATATTTAGCTATCCATTTCACTTTTAATCATTTGTTTTTATATTATGAACACATCTTTCAAACATAGATAGAACATGGCCTTCTACAATTTAGAACTGCTTCAAATTTTGAAAACTAACTTAAAAAACAAAATTTGAAAGTTTCCCCTTTTTTAAATTGTTATAGTTACTTTCAATAATGCTTTCAGTCCTTCGAAATAAATTTTAATAATATGAAATTTTGAATTTAAATTTAAATTGATTTTGAGGGATTAAAAGTAGGTTTAGAAAAGATTTTTAAATATAATATAACTATTTCAAATCAGTTATTAAGTTAAATGAAGTGTTTTGTATTGGTGAATAATATTATAAATTAGGTGGTATGTGATATTAATATTAAACATATGGGGGAAAATAGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAGCTTGCTGCTGATTATGTTACCAAGTAACCTTCTATATGCTATCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTAATTTCTCTCTACTTCTGATATGAACACAATAATTTATGTAGTGATTAAATTTCAGAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTGTAAGTATAATCTATATAATCCTTTGAAGCTTCCTTCTTCAATTCTTTACTTTTCTAATTATTTCAATTTAACAATTGATTTTTTTTCTTTTTCCTTTCTGCAGAAAATGCCAACAATTCAGGTGACCACTTTTCCTTAATTTTCACTTTTAGATTAAGTTTTTACTAAAAAAAATAATGCTTTTAGGTGAAGTACGTTTTTTTTTCATTAAAAGTATGAATATGCGTATTTGAGAGTGGTACAAATGAAATTTCTTCTAAAGTTATTAATTTATTAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGCTTCATAATTTTCTGTCCACAACACTTTCTTTGTTCATTTATTATAATTACTTCATCTTCAACCTCCCCTTAACCTCAAATTTCATTCTCAAATTTTTTATTATATAATATACATCCCCATATTTGTAAAACTTTAATTTATTGTACATATATAACAATATGTTTATGTCAAATCTTGACACCTCTGTAACTTTAGGTTGTTTACACGTAATCAATCACATATGTTTCTCT

mRNA sequence

AAATGTTGAGGGAGGGGGACCAAAAAGAAAATGTGTGGATGTGGGCCCCCAACTCCCATCCCATCCCATCCCCTCTCACTTTTCTGCTCCTTCACCTTACGGATAAGGACTCCAAAGAAAGAAAAAAAAAAACTTTCCCTTCAACAGTTCCACTCCTTCTACTCTCTCAATTTCAAAGAAATAGAGAGAAAGAAAACCCTAAAAACAGAGAGAGAGAGAGACACAGATATGTATGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACGCACAACTTCACCAACACCAGTTTCTAAGCAACGGGAAGCGTTGTGGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCCGGCTTTTGGCCGGATTTGTCAAGACCAGCGTCGGTGGAAATGGAATCCATTGACGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAACCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAGCTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGCTTCATAATTTTCTGTCCACAACACTTTCTTTGTTCATTTATTATAATTACTTCATCTTCAACCTCCCCTTAACCTCAAATTTCATTCTCAAATTTTTTATTATATAATATACATCCCCATATTTGTAAAACTTTAATTTATTGTACATATATAACAATATGTTTATGTCAAATCTTGACACCTCTGTAACTTTAGGTTGTTTACACGTAATCAATCACATATGTTTCTCT

Coding sequence (CDS)

ATGTGTGGATGTGGGCCCCCAACTCCCATCCCATCCCATCCCCTCTCACTTTTCTGCTCCTTCACCTTACGGATAAGGACTCCAAAGAAAGAAAAAAAAAAACTTTCCCTTCAACAGTTCCACTCCTTCTACTCTCTCAATTTCAAAGAAATAGAGAGAAAGAAAACCCTAAAAACAGAGAGAGAGAGAGACACAGATATGTATGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACGCACAACTTCACCAACACCAGTTTCTAAGCAACGGGAAGCGTTGTGGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCCGGCTTTTGGCCGGATTTGTCAAGACCAGCGTCGGTGGAAATGGAATCCATTGACGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAACCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAGCTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGCTTCATAA

Protein sequence

MCGCGPPTPIPSHPLSLFCSFTLRIRTPKKEKKKLSLQQFHSFYSLNFKEIERKKTLKTERERDTDMYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS*

Homology

[Close]

BLAST of MELO3C008932 vs. Swiss-Prot
Match: TRL31_ARATH (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-23
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 1


Query: 81  QLHQHQFLSNGKRCGFLNTDFGD------HRRRELRIKAEAGFWPDLSRPASVEMESIDD 140
           QL + + L+  K+CGF  + + +      H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 141 SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADY 179
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEY 147

[Close]

BLAST of MELO3C008932 vs. Swiss-Prot
Match: TRL31_ORYSJ (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 8.6e-16
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 1


Query: 102 GDHRRREL---RIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMA 161
           G  RRRE     ++AEA FW D+S+P  VEME ID  ++LD  L  + +  QPI+IDWMA
Sbjct: 55  GKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMA 114

Query: 162 TWCRKCIYLKPKLEKLAADY 179
           +WCRKCIYLKP+LEK+A ++
Sbjct: 115 SWCRKCIYLKPRLEKIAGEF 131

[Close]

BLAST of MELO3C008932 vs. Swiss-Prot
Match: TRL32_ARATH (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 105 RRRELRIKAEAGFWPDLS-RPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 164
           R R + I+ + G   +L   P SVE+  I      D+++  AQ+L + ++I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 165 CIYLKPKLEKLAADY 179
           CIYLKPKLEKLAA++
Sbjct: 113 CIYLKPKLEKLAAEF 127

[Close]

BLAST of MELO3C008932 vs. TrEMBL
Match: A0A0A0KZ53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.3e-54
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           M VLGAS+SHILY  LHQH FL+N KRC FL+TDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 181
           VEMESIDDSDQLDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVT
Sbjct: 61  VEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 114

[Close]

BLAST of MELO3C008932 vs. TrEMBL
Match: W9SW93_9ROSA (Thioredoxin-like 3-1 OS=Morus notabilis GN=L484_028031 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-27
Identity = 74/125 (59.20%), Postives = 87/125 (69.60%), Query Frame = 1


Query: 72  ASSSHILYAQLHQ-----HQFL--SNGKRCGFLNTD---FGDHRRRELR------IKAEA 131
           A+SS IL+ + H      HQ L  S+G    F       +GD R RE +      ++AEA
Sbjct: 5   AASSQILWREFHHRDHHHHQQLCASSGNYSFFAGKSGGFWGDFRNREDKKTSKRDMRAEA 64

Query: 132 GFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLA 181
            FWPDLS+PASVEME I+D D LDRIL HAQ++SQPILIDWMA+WCRKCIYLKPKLEKLA
Sbjct: 65  -FWPDLSKPASVEMEPINDCDHLDRILSHAQEISQPILIDWMASWCRKCIYLKPKLEKLA 124

[Close]

BLAST of MELO3C008932 vs. TrEMBL
Match: A0A0R0EM67_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G149200 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-26
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQLHQH-----QFLSNGK--------RCGFL----NTDFGDHRRREL 126
           M V+GA S H LY +++Q      Q+L +G+         CG +        G  +RR L
Sbjct: 1   MSVIGAYS-HFLYGEVYQKDQQCPQYLVSGRGYLFSHKSSCGSIWVGSRKSEGKIKRRNL 60

Query: 127 RIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKP 179
           R++A    WPDLSRP  +EME I DS+QLD+IL+HAQQ SQPILIDWMATWCRKCIYLKP
Sbjct: 61  RVEA---MWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKP 120

[Close]

BLAST of MELO3C008932 vs. TrEMBL
Match: A0A0B2SMC7_GLYSO (Thioredoxin-like 3-1, chloroplastic OS=Glycine soja GN=glysoja_028429 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-26
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQLHQH-----QFLSNGK--------RCGFL----NTDFGDHRRREL 126
           M V+GA S H LY +++Q      Q+L +G+         CG +        G  +RR L
Sbjct: 1   MSVIGAYS-HFLYGEVYQKDQQCPQYLVSGRGYLFSHKSSCGSIWVGSRKSEGKIKRRNL 60

Query: 127 RIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKP 179
           R++A    WPDLSRP  +EME I DS+QLD+IL+HAQQ SQPILIDWMATWCRKCIYLKP
Sbjct: 61  RVEA---MWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKP 120

[Close]

BLAST of MELO3C008932 vs. TrEMBL
Match: K7MYG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G149200 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-26
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQLHQH-----QFLSNGK--------RCGFL----NTDFGDHRRREL 126
           M V+GA S H LY +++Q      Q+L +G+         CG +        G  +RR L
Sbjct: 1   MSVIGAYS-HFLYGEVYQKDQQCPQYLVSGRGYLFSHKSSCGSIWVGSRKSEGKIKRRNL 60

Query: 127 RIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKP 179
           R++A    WPDLSRP  +EME I DS+QLD+IL+HAQQ SQPILIDWMATWCRKCIYLKP
Sbjct: 61  RVEA---MWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKP 120

[Close]

BLAST of MELO3C008932 vs. TAIR10
Match: AT5G06690.2 (AT5G06690.2 WCRKC thioredoxin 1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 1


Query: 81  QLHQHQFLSNGKRCGFLNTDFGD------HRRRELRIKAEAGFWPDLSRPASVEMESIDD 140
           QL + + L+  K+CGF  + + +      H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 141 SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADY 179
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEY 147

[Close]

BLAST of MELO3C008932 vs. TAIR10
Match: AT5G04260.1 (AT5G04260.1 WCRKC thioredoxin 2)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 105 RRRELRIKAEAGFWPDLS-RPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 164
           R R + I+ + G   +L   P SVE+  I      D+++  AQ+L + ++I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 165 CIYLKPKLEKLAADY 179
           CIYLKPKLEKLAA++
Sbjct: 113 CIYLKPKLEKLAAEF 127

[Close]

BLAST of MELO3C008932 vs. NCBI nr
Match: gi|659083001|ref|XP_008442136.1| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 7.4e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 181
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 114

[Close]

BLAST of MELO3C008932 vs. NCBI nr
Match: gi|700199630|gb|KGN54788.1| (hypothetical protein Csa_4G496780 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 1.0e-53
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 126
           M VLGAS+SHILY  LHQH FL+N KRC FL+TDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 127 VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 181
           VEMESIDDSDQLDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVT
Sbjct: 61  VEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 114

[Close]

BLAST of MELO3C008932 vs. NCBI nr
Match: gi|778694930|ref|XP_004146393.2| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 6.8e-45
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 1


Query: 87  FLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQ 146
           FL+N KRC FL+TDFGDHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQ
Sbjct: 41  FLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQ 100

Query: 147 QLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 181
            LSQPILIDWMATWCRKCIYLKPKLEKLAADYVT
Sbjct: 101 HLSQPILIDWMATWCRKCIYLKPKLEKLAADYVT 134

[Close]

BLAST of MELO3C008932 vs. NCBI nr
Match: gi|1009181294|ref|XP_015872089.1| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 133.7 bits (335), Expect = 3.4e-28
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 1


Query: 72  ASSSHILYAQLHQ---HQFLSNGKRCGFLNTDFG----DHRRRELR------IKAEAGFW 131
           A++SH+LY ++HQ   HQ L +G    F    FG    DHR R+ R      +K EA FW
Sbjct: 5   AANSHVLYREIHQRDQHQQLWSGGNFLFQPKTFGLIPFDHRNRDYRKISRRDLKVEA-FW 64

Query: 132 PDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADY 181
           PDLSRP+ VEME I+D DQLD+IL HAQ+LS P+LI+WMA+WCRKCIYLKPKLEKLAA++
Sbjct: 65  PDLSRPSVVEMEPINDCDQLDQILSHAQELSHPVLIEWMASWCRKCIYLKPKLEKLAAEF 124

[Close]

BLAST of MELO3C008932 vs. NCBI nr
Match: gi|1012185877|ref|XP_015969425.1| (PREDICTED: thioredoxin-like 3-1, chloroplastic [Arachis duranensis])

HSP 1 Score: 129.8 bits (325), Expect = 4.9e-27
Identity = 75/137 (54.74%), Postives = 87/137 (63.50%), Query Frame = 1


Query: 67  MYVLGASSSHILYAQL--------HQHQ-------------FLSNGKRCGFL-NTDFGDH 126
           M   G    HILY ++        HQHQ             FLS+ K  G   N  FG  
Sbjct: 1   MSATGLLYPHILYGEVVVYQRDQQHQHQHQCLVSSSSGRYVFLSSLKSSGGCGNASFGQR 60

Query: 127 -RRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 181
            RRR LR++A    WPDLSRP+ +EMESIDDS+ LD+IL+HAQQ SQPI+IDWMA WCRK
Sbjct: 61  IRRRNLRVEAT---WPDLSRPSVIEMESIDDSEHLDQILLHAQQNSQPIIIDWMAAWCRK 120

The following BLAST results are available for this feature:

BLAST of MELO3C008932 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRL31_ARATH	3.3e-23	50.00	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana GN=WCRKC1 PE=2 SV=3	[more]
TRL31_ORYSJ	8.6e-16	55.00	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774...	[more]
TRL32_ARATH	2.2e-11	46.67	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=1	[more]

BLAST of MELO3C008932 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ53_CUCSA	7.3e-54	91.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G496780 PE=4 SV=1	[more]
W9SW93_9ROSA	7.6e-27	59.20	Thioredoxin-like 3-1 OS=Morus notabilis GN=L484_028031 PE=4 SV=1	[more]
A0A0R0EM67_SOYBN	8.4e-26	54.26	Uncharacterized protein OS=Glycine max GN=GLYMA_19G149200 PE=4 SV=1	[more]
A0A0B2SMC7_GLYSO	8.4e-26	54.26	Thioredoxin-like 3-1, chloroplastic OS=Glycine soja GN=glysoja_028429 PE=4 SV=1	[more]
K7MYG8_SOYBN	8.4e-26	54.26	Uncharacterized protein OS=Glycine max GN=GLYMA_19G149200 PE=4 SV=1	[more]

BLAST of MELO3C008932 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06690.2	1.8e-24	50.00	WCRKC thioredoxin 1	[more]
AT5G04260.1	1.2e-12	46.67	WCRKC thioredoxin 2	[more]

BLAST of MELO3C008932 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659083001\|ref\|XP_008442136.1\|	7.4e-60	100.00	PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo]	[more]
gi\|700199630\|gb\|KGN54788.1\|	1.0e-53	91.23	hypothetical protein Csa_4G496780 [Cucumis sativus]	[more]
gi\|778694930\|ref\|XP_004146393.2\|	6.8e-45	94.68	PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis sativus]	[more]
gi\|1009181294\|ref\|XP_015872089.1\|	3.4e-28	58.20	PREDICTED: thioredoxin-like 3-1, chloroplastic [Ziziphus jujuba]	[more]
gi\|1012185877\|ref\|XP_015969425.1\|	4.9e-27	54.74	PREDICTED: thioredoxin-like 3-1, chloroplastic [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50658	melon EST collection version 4.0	transcribed_cluster
MU55638	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008932T2	MELO3C008932T2	mRNA
MELO3C008932T1	MELO3C008932T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50658	MU50658	transcribed_cluster
MU55638	MU55638	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 105..240 score: 3.7
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 125..236 score: 6.6
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 128..238 score: 1.45
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 147..225 score: 4.0
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 112..242 score: 10
None	No IPR available	PANTHER	PTHR10438:SF283	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 105..240 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008932	Csa4G496780	Cucumber (Chinese Long) v2	cumeB326
MELO3C008932	Cla011663	Watermelon (97103) v1	mewmB576
MELO3C008932	ClCG04G002040	Watermelon (Charleston Gray)	mewcgB526
MELO3C008932	Cla97C04G069700	Watermelon (97103) v2	mewmbB534
MELO3C008932	CSPI04G20030	Wild cucumber (PI 183967)	cpimeB324
MELO3C008932	Cucsa.353860	Cucumber (Gy14) v1	cgymeB573
MELO3C008932	Lsi01G019970	Bottle gourd (USVL1VR-Ls)	lsimeB152
MELO3C008932	CsaV3_4G030690	Cucumber (Chinese Long) v3	cucmeB336

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008932	Silver-seed gourd	carmeB0287
MELO3C008932	Silver-seed gourd	carmeB0529
MELO3C008932	Cucurbita maxima (Rimu)	cmameB620
MELO3C008932	Cucurbita maxima (Rimu)	cmameB811
MELO3C008932	Cucurbita moschata (Rifu)	cmomeB612
MELO3C008932	Cucurbita moschata (Rifu)	cmomeB795
MELO3C008932	Cucurbita pepo (Zucchini)	cpemeB074
MELO3C008932	Cucurbita pepo (Zucchini)	cpemeB450
MELO3C008932	Cucumber (Gy14) v2	cgybmeB285