CSPI07G01820 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G01820
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	Chr7 : 1589923 .. 1594385 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCACATCATCTTTTATTTCTATCACTTCCACTATTCTCTTGTGCAAAGCGGCAGCCACCAGTTTTCTCAAAATAACACCGGCGACCGTAACGAACTCCGGCCAGCGACCACTAACGGCGCCTTTGAAGCCCCACTAACAGCGACGCAAACTCCTTCCTGCAGCGGCGGTGCTCTATCCACGAACCACGACACTCAAATCTAACTACAGCGGCGCGATTCCTCTACTTTCTTCTCTGTATCGGTGGTGTTGTGACAGTCTAGATTTCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGGTCAGTCTCGGTTTTGATTTTTTGTTGAACTTATTTGTATTTTTTATTAGCTTGAAGATTATAATCTTTTATAACCTTTGAAATTTTGTTTCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGTATGTTTGTTTTTCTTGCCTTCACATGTGATTTGTAGGATATGGTAGAAGAAAAAATCTTAAACAAAAATTAAAGGGGATCATGAACTTGAGCACCAACTGTCAACTAAATAAGTCATGCCTCTTTATCAGTAAGAGATTCAAAGTTTGAATTTCCACTCGAACATGTTTGAATAAAAGAATTGGAGAGCATGAAGTTGGTTGTGCATACACTTTAGTTTGGCTGGTGTGTTTATGTGAGACACATGTCAAACACTTGGAACTCCAACACTTGTTGGATTCATATAGAGCACTTTTTTGTTTGTTATATTTTTAGATACTAGTTGTACAAAGTCAATCTAGGTTCAAAATTGTTTAGTTATACTAAATAGACACATCTATAATAAAAAAATAATAAAATTTCAAAGCAAAATGCATCTAACATATTGACTCTTAATGTCTTTCTCGTGTAAAAATGATATATTTACTCAAACGTGTAAATTACAATGACACTTAGCCCTTGTGCCCATGTCCTAGATTTTAAAAAAATGGTGTGATCGTGTCTGTTGTGTCGTATCTATGTCTGTGCTTCTTAAATCCAAAAGGTCTGTTAAAATATTCATGCTACCTTGTTTTCATGAATGAAGAATCTAAATAAAGATCTCAGGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTAAGAACTGTCCTCATCCCTTTCTATGTCATGAAAGAAAAACTGTGTATCCAGTGAAAACTAAAAACTGATCATGTTAGAATTGAATTGGAGTAGGCTTCTTAGTCTGAAGTCTCATTTTTGTGGGGTTAGTTTTTTGCACCCTTGTATATTTTTCATTTGAAAATTCTTTTCCCGATCATTCTAGAGGAAACCAACTAACCTATGAAAGTCAGTTTTATGTCGCCAACAGTTGGCTTCTTTATCCATTGTTTCATTTTTGAGCAAATATGCGATATCTGTTTGAATTCTCATGTATGTATTCAGCTTGATGTTTTAGCTTATGTTACGATACACCTATATTTATGTTTCATTCCCCTCAATGTCTTTAGGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGTAATTTTTCTCCCAGTTGATGAATTTGATGGGATGTTCTAGTTGCAACTAGAGGATTAATGAAGTTGGTAATGTAAAGAAAAAAAGAACATGTTATATATATATAAATTTTTACACCAAAATAGAGCATTGAAAATGGATGAATCATGCACTTCATTTGTAGATTTTATTTGAAAATTCTAGGCTTCTAGCATTTGTCTCTTTCCAAACCTTCGTTATCAACGCAGAAATGATACTGAACCAAACAACTTCTTTAGTGGCTTCGAATGGGTGGTCCATTAGTGACGAAAATGAAAACAAAAACATAGAGATTGAATTTTCTTCTGATAGGTGCTTGTGAAACATCCTTTTCTAGTACTGGCCATCAACTATCATCTTCTTTTCCCCCTCCAAGTTATGTAAATCACTATGGCCCATTTTTTCTCTCAGAAAATTTGTGTATCTTGAATTGTTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGGTTAGCATTTGATACTTTCAGCACATCATATATTGAACTTTATTGATGAATATGTCACTTTTAAATTGAAAATAATCAAATTAGCGAATAAAAAGATGGGGCTTTTTCAAAAATAGAAAGAAGAAAAAAAACAAACTATTGACACTCCATAAAAAAATCACCAAAAAGACAAAATTCATTACACTTTATTTTTCTATGAAGTGTATTGTCAATTTTTCAATTTTTCACAATTTCCCTAAAAAGAACCTTGGAATGTGAAGATTTGCAAGTTGGATGGGTTTAGGTAAATGGTGTTATATGTCCTAGAAAATGTTGAATGTTCAACCTTGAATGTTAGGAAGCGTCTGGCCCACAAAGTGGAGTAAACAAGTATGAGATTAATATTTTGAAGTTAGTAAGTTTTTGTAGGTAGAGTTGTAAGATTGAGTTCTTTCAATATTGTGAAAAGTAGATTATGAAAGCAAGATGGAGTTACTTGCTAAATGTAGAAAGTAGAGATGGAGGGAAAGATTAAATTACTTGGTAAATGCAAAAAGTACAAAAAATAAAATAAAAAATAAAGAAGATGAAGTTACTCGATAAATGTGCTAGTTCAATAATGTTTTTTATAGAAATTGAGTTGTTTAAGTTGGTGAGCCAAACGACCCCTTGGTGATTCCATTCTTCTAGATGCAATGTTTACTTCTATTTTCACGCTTTCATCATGTTCCTCTCTGGGTCTTTTGTCTAAGACCATATGTTGTATATTTTCTTATCTAATGGCTTTCATTGTCATGAACCTTGCTCTTCTGACTTTGAAGTGTTCATTTACCACTAGAGGAAAATCTTCATGTTTTTCTCGTTTTCTACCGTTTTACAACTATGGTTGAGTGGTTTATACACTACTGCTTCTCAATGTACTTTCTTCTTTATTTCATAAAACATGAAGATTATTATCTCATTAGAGATATTCTTTTTGCCAAAGCTATTTGTAATCCCTCATGTAGGTAGCTTCGAAAGAGGGAAGAGTACAGGAAATCTCTAAATTTGAAATCACTGCACATATATACATATCCTTGGCTATTATAAAAGAACAACTACAAGTCTTGTCTTTCCATTTTCTATGAAAGGCTTGACCAGATTTGACGTTCCTCGTTAATTTTTACTGTCTGAAGATTTGTTTTGTACACCTTAGTTTCCCACAATAAGTATACTCAGCGTTGTCTAATAAAATATTATGTTCCTTTCAAAAAATGAAGAAAAAATAATAAATACAATATTCTGTTCATCTGTTCATTACACAAAATTCATTACACTAGTGGTCATCTGTTCTTGTCAGAGGGGTGGTTGAACTTCGTTGGATTTCCACCCATTGTTTCTTTTTTCCTTCTATTATGGTCATGTTTGGTAAAAAATACTTTTATCACATTTAAAACCACTCCCAATTGTTTAATCTTTTAAATATTTAATGGTTTAGTTTTATATTCTTAAACACAATTTACTTACATGATTCAAAGTCGTATGGGAATGACTTTTAATACTGTAGTATACTATTATTGATATATTGTGGTGTTTTCATATTGAAAAATTAATCTGATTCTTGATCCTCTTTTGCAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAGCTAATGTATGATACGATCAAACAACTCAACAACTTATGATTTCATCCGCATGACTAGCAACAAAATCTCATATACTTTCAATATCAACTATTGGAAGAGTTGAGGTAACCACAAAACCAACTAGAAGATGAAACTTCAAGGATATCTCACCTGGTGGTTATTGTTAATAATGATCATTGCTTAGCAGATAAAAGCGCAATCAACCGTTCAAATGTAGATTCGATCTTCCATTGATGAACACGAAAAGGTAAAGAATTTACCTTGTGAGTTTGATACATTATAGCAATCTTAGTTTAAAATAGTATAGTATTTATCACTATTCTCCCCCTCCACAACAATATCAATTTAATATTCTTAGCGATTGTTGTTTTCTTTTGTGCCTTTTGGTATTTGGAGAGAGCGTGGTGTAAATGTGAAGCCTCTG

mRNA sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Coding sequence (CDS)

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Homology

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BLAST of CSPI07G01820 vs. Swiss-Prot
Match: Y5382_ARATH (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.2e-40
Identity = 90/199 (45.23%), Postives = 138/199 (69.35%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

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BLAST of CSPI07G01820 vs. TrEMBL
Match: A0A0A0K4X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

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BLAST of CSPI07G01820 vs. TrEMBL
Match: A0A059BPU4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 122/199 (61.31%), Postives = 156/199 (78.39%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA V+K+QQ+F+K ++EMDRW ELQ+RL+SQF+NASSI+ RLQ+++D KN+G L  +DG
Sbjct: 1   MEAAVRKFQQKFKKVREEMDRWGELQLRLVSQFRNASSIMDRLQVIRDGKNYGPLKAVDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I EA+  KQ+ESL+    S++KTMEE   +V S+EKI+RDGKQLVKGGS QPS+K LQQ+
Sbjct: 61  IGEAVWTKQVESLENIMLSMRKTMEEFHGVVMSLEKIHRDGKQLVKGGSGQPSVKYLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VG+KP L+DCL+GLM+L  MHRSEY LK S+VSAL  L   A    A DL +L QLLVDQ
Sbjct: 121 VGVKPCLQDCLDGLMILYEMHRSEYFLKSSVVSALSTL---ALKPSASDLHALQQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI KEEV+F++D I   E
Sbjct: 181 PNIPKEEVQFIYDIIFAEE 196

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BLAST of CSPI07G01820 vs. TrEMBL
Match: D7UDC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.1e-58
Identity = 124/199 (62.31%), Postives = 154/199 (77.39%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME MVKKYQQ+FRK +DE  RWDELQ RL+SQF+NASSII RLQ +Q+ KN+G+L  +DG
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A+L KQMESL+    S+KKT++E   IV S+EKI RDG+QLVKGGS + ++KQLQQ+
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KPSL DCL+GL LL  MH+SEY LK S+VSAL  L  K     A DL +LHQLLVDQ
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKP---SASDLGALHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI KEEV+F+FD +   E
Sbjct: 181 PNIPKEEVQFIFDIVFAEE 196

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BLAST of CSPI07G01820 vs. TrEMBL
Match: A0A0K9QTK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 117/195 (60.00%), Postives = 154/195 (78.97%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME ++KKYQQ+FRK ++EMDRW++LQ RL+SQF NASSIIGRLQ++ D KN+GSL G++G
Sbjct: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           + +A+L KQMESL+    SIKKT+E+  +IV S+EK+ RD KQLV+GGS+Q S KQLQQ+
Sbjct: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSL DCL+GL +L  MH SEY LK S+VSAL  +   A    ++DL +L QLL DQ
Sbjct: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNI---ALKPSSKDLGALRQLLFDQ 180

Query: 181 PNIKKEEVEFVFDTI 196
           PNI ++EV+F++D I
Sbjct: 181 PNIPRDEVQFIYDII 192

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BLAST of CSPI07G01820 vs. TrEMBL
Match: A0A0J8CWF0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 117/195 (60.00%), Postives = 154/195 (78.97%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME ++KKYQQ+F+K ++EMD W+ LQ RLISQF NASSII RLQ++ D KN+G+L G+DG
Sbjct: 1   MEGILKKYQQKFKKVREEMDNWENLQSRLISQFSNASSIIQRLQVIGDKKNYGNLKGVDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A+L KQMESL+ +  S+K TMEE   IV S+EK+ RD KQL+ GGS QPS KQLQQ+
Sbjct: 61  IEDAVLQKQMESLENNLLSMKNTMEEFHKIVLSLEKMVRDSKQLLGGGSRQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KPSL DCL+GL++L  MH+SEY LK S+VSAL ++ +KA    + DL +L QLLVDQ
Sbjct: 121 MGIKPSLSDCLDGLVILQEMHKSEYLLKTSVVSALLKIAFKA---SSNDLGALRQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTI 196
           PNI ++EV+F+FD I
Sbjct: 181 PNIPRDEVQFIFDII 192

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BLAST of CSPI07G01820 vs. TAIR10
Match: AT5G43822.1 (AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 4.1e-41
Identity = 90/199 (45.23%), Postives = 138/199 (69.35%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

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BLAST of CSPI07G01820 vs. NCBI nr
Match: gi|449454299|ref|XP_004144893.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]

BLAST of CSPI07G01820 vs. NCBI nr
Match: gi|659094000|ref|XP_008447827.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 2.3e-102
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]

BLAST of CSPI07G01820 vs. NCBI nr
Match: gi|778723284|ref|XP_011658635.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 3.0e-102
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ   DPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ---DPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 197

[Close]

BLAST of CSPI07G01820 vs. NCBI nr
Match: gi|659094002|ref|XP_008447828.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 3.1e-99
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ   DPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ---DPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 197

[Close]

BLAST of CSPI07G01820 vs. NCBI nr
Match: gi|659094004|ref|XP_008447830.1| (PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA 163
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKA
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKA 162

The following BLAST results are available for this feature:

BLAST of CSPI07G01820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5382_ARATH	7.2e-40	45.23	Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1	[more]

BLAST of CSPI07G01820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4X9_CUCSA	1.5e-105	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1	[more]
A0A059BPU4_EUCGR	2.2e-59	61.31	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1	[more]
D7UDC1_VITVI	3.1e-58	62.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=...	[more]
A0A0K9QTK1_SPIOL	4.5e-57	60.00	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1	[more]
A0A0J8CWF0_BETVU	4.5e-57	60.00	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 S...	[more]

BLAST of CSPI07G01820 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43822.1	4.1e-41	45.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CSPI07G01820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454299\|ref\|XP_004144893.1\|	2.2e-105	100.00	PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus]	[more]
gi\|659094000\|ref\|XP_008447827.1\|	2.3e-102	96.50	PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]	[more]
gi\|778723284\|ref\|XP_011658635.1\|	3.0e-102	98.50	PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]	[more]
gi\|659094002\|ref\|XP_008447828.1\|	3.1e-99	95.00	PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]	[more]
gi\|659094004\|ref\|XP_008447830.1\|	1.4e-80	96.30	PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G01820.1	CSPI07G01820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 5..25 scor
None	No IPR available	PANTHER	PTHR37904	FAMILY NOT NAMED	coord: 2..199 score: 6.8
None	No IPR available	PANTHER	PTHR37904:SF1	SUBFAMILY NOT NAMED	coord: 2..199 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G01820	Cla015740	Watermelon (97103) v1	cpiwmB622
CSPI07G01820	Csa7G025190	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G01820	MELO3C013247	Melon (DHL92) v3.5.1	cpimeB539
CSPI07G01820	ClCG02G003390	Watermelon (Charleston Gray)	cpiwcgB575
CSPI07G01820	Lsi11G012910	Bottle gourd (USVL1VR-Ls)	cpilsiB506
CSPI07G01820	MELO3C013247.2	Melon (DHL92) v3.6.1	cpimedB524
CSPI07G01820	CsaV3_7G001930	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G01820	Cla97C02G029940	Watermelon (97103) v2	cpiwmbB553
CSPI07G01820	Bhi05G001353	Wax gourd	cpiwgoB681
CSPI07G01820	Cucsa.099740	Cucumber (Gy14) v1	cgycpiB112
CSPI07G01820	CmaCh11G013300	Cucurbita maxima (Rimu)	cmacpiB149
CSPI07G01820	CmoCh11G017900	Cucurbita moschata (Rifu)	cmocpiB131
CSPI07G01820	Cp4.1LG04g04510	Cucurbita pepo (Zucchini)	cpecpiB692
CSPI07G01820	CsGy7G001780	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G01820	Carg18114	Silver-seed gourd	carcpiB1103

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G01820	Silver-seed gourd	carcpiB0235
CSPI07G01820	Cucurbita maxima (Rimu)	cmacpiB533
CSPI07G01820	Cucurbita maxima (Rimu)	cmacpiB537
CSPI07G01820	Cucurbita moschata (Rifu)	cmocpiB524
CSPI07G01820	Cucurbita moschata (Rifu)	cmocpiB528
CSPI07G01820	Cucurbita pepo (Zucchini)	cpecpiB259