Csa7G025190 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G025190
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationChr7 : 1395235 .. 1399753 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTATTTCTATCACTTCCACTATTCTCTTGTGCAAAGCGGCAGCCACCAGTTTTCTCAAAATAACACCGGCGACCGTAACGAACTCCGGCCAGCGACCACTAACGGCGCCTTTGAAGCCCCACTAACAGCGACGCAAGCTCCTTCCTGCAGCGGCGGTGCTCTATCCACGAACCACGACACTCAAATCTAACTACAGCGGCGCGATTCCTCTACTTTCTTCTCTGTATCGGTGGTGTTGTGACAGTCTAGATTTCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGGTCAGTCTCAGTTTTGATTTTTTGTTGAACTTATTTGTATTTTTTATTAGCTTGAAGATTATAATCTTTTATGACCTTTGAAATTTTGTTTCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGTATGTTTGTTTTTCTTGCCTTCACGTGTGATTTGTAGGATATGGTAGAAGAAAAAATCTTAAACAAAAATTAAAGGGGATCATGAACTTGAGCACCAACTGTCAACTAATTAAGTCATGCCTCTTTATCAGTAAGAGATTCGAAGTTTGAATTTCCACTCGAACATGTTTGAATAAAAGAATTGGAGAGCATGAAGTTGGTTGAGCATACACTTTAGTTTGGCTGGTGTGTTTATGTGAGACACATGTCAAACACTTGGAACTCCAACACTTGTTGGATTCATATAGAGCACTTTTTTGTTTGTTATATTTTTAGATACTAGTTGTACAAAGTCAATCTAGGTTCAAAATTGTTTAGTTATACTAAATAGACACATCTATAATAAAAAAATAATAAAATTTCAAAGCAAAATGCATCAAACATATTGACTCTTAATGTCTTTCTCGTGTAAAAATGATATATTTACTCAAACGTGTAAATTACAATGAAACTTAGCCCTATGTGCCCATGTCCTAGATTTAAAAAAAATGGTGTGATCGTGTCTGTTGTGTCGTATCTATGTCTGTGCTTCTTAAATCCAAAAGGTCTGTTAAAATATTCGTGCTACCTTGTTTTCATGAATGAAGAATCTAAATAAAGATCTCAGGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTAAGAACTGTCCTCATCCCTTTCTATGTCATGAAAGAAAAACTGTGTATCCAGTGAAAACTAAGAACTGATCATGTTAGAATTGAATTGGAGTAGGCTTCTTAGTCTGAAGTCTCATTTTTGTTGGGTTAGTTTTTTGCACCCTTGTATATTTTTCATTTGAAAATTCTTTTCCCGATCATTCTAGAGGAAACCAACTAACCTATGAAAGTCAGTTTTATGTCGCCAACAGTTGGCTTCTTTATCCATTGTTTCATTTTTGAGCAAATATGCGATATCTGTTTGAATTCTCATGTATGTATTCAGCTTGATGTTTTAGCTTATGTTACGATACACCTATATTTATGTTTCATTCCCCTCAATGTCTTTAGGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGTAATTTTTCTCCCAGTTGATGAATTTGATGGGATGTTCTAGTTGCAACTAGAGGATTAATGAAGTTGGTAATGTAAAGTAAAAAAGAACATGTTATATATATATAAATTTTTACACCAAAATGGAGCATTGAAAATGGATGAATCATGCACTTCATTTGTAGATTTTATTTGAAAATTCTAGGCTTCTAGCATTTGTCTCTTTCCAAACCTTCGTTATCAACGCAGAAATGATACTGAACCAAACAACTTCTTTAGTGGCTTCGAATGGGTGGTCCATTAGTGACGAAAATGAAAACAAAAACATAGAGATTGAATTTTCTTCTGATAGGTGCTTGTGAAACATCCTTTTCTAGTACTGGCCATCAACTATCATCTTCTTTTCCCCCTCCAAGTTATGTAAATCACTATGGCCCATTTTTTCTCTCAGAAAATTTGTGCATCTTGAATTGTTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGGTTAGCATTTGATACTTTCAGCACATCATATATTGAACTTTATTGATGAATATGTCACTTTTAAATTGAAAATAATCAAATTAGCGAATAAAAAGATGGGGCTTTTTCAAAAATAGAAAGAAGAAAAAAAACAAACTATTGACACTCCATAAAGAAATCACCAAAAAGACAAAATTCATTACACTTTATTTTTCTATGAAGTGTATTGTCAATTTTTCTATTTTTCACAATTTCCCTAAAAAGAACCTTGGAATGTGAAAATTTGGAAGTTAGATGGGTTTAGGTAAATGGTGTTATATGTCCTAGAAAATGTTGAATGTTCAACCTTGAATGTTAGGAAGCGTCTGGCCCACAAAGTGGAGTAAACAAGTATGAGATTAATATTTTGAAGTTAGTAAGTTTTTGTAGGTAGAGTTGTAAGATCGAGTTCTTTCATTATTGTGAAAAGTAGATTATGAAAGCAAGATGGAGTTACTTGGTAAATGTAGAAAGTAGAGATGGAGGGAAAGATTAAATTACTTGGTAAATGCAAAAAGTACAAAAAAATAAAATAAAAAATAAAGAAGATGAAGTTACTCGATAAATGTGCTAGTTCAATAATGTTTTTTATAGAAATTGAGTTGTTTAAGTTGGTGAGCCAAACGACCCCTTGGTGATTCCATTCTTCTAGATGCAATGTTTACTTCTATTTTCACGCTTTCATCATGTTCCTCTCTGGGTCTTTTGTCTAAGACCATATGTTGTATATTTTCTTATCTAATGGCTTTCATTGTCATGAACCTTACTCTTCTGACTTTGAAGTGTTCATTTACCACTAGAGGAAAATCTTCATGTTTTTCTCGTTTTCTACCGTTTTACAACTATGGTTGAGTGGTTTATACACTACTGCTTCTCAATGTACTTTCTTCTTTATTTCATAAAACATGAAGATTATTATCTCATTAGAGATATTCTTTTTGCCAAAGCTATTTGTAATCCCTCATGTAGGTAGCTTCGAAAGAGGGAAGAGTACAGGAAATCTCTAAATTTGAAATCACTGCACATATATACATATCCTTGGCTATTATAAAAGAACAACTACAAGTCTTGTCTTTCCATTTTCTATGAAAGGCTTGACCAGATTTGACGTTCCTCGTTAATTTTTACTGTCTTAAGATTTGTTTTGTACACCTTAGTTTCCCACAATAAGTATACTCAGCGTTGTCTAATAAAATATTATGTTCCTTTCAAAAAATGAAGAAAAAATAATAATAAATTTGGTTTGGCTATCTAGTGGTCATCTGTTCTTGTCAGAGGGGTGGTTGAACTTCGTTGGATTTCCACCCATTGTTTCTTTTTTCCTTCCATTATGGTCATGTTTGGTAAAAAATACTTTTATCACATTTAAAACCACTCCCAATTGTATCGTTTAATCTTTTAAATATTTAATGGTTTAGTTTTATATTCTTAAACACAATTTACTTACATGATTCAAAGTCGTATGGGAATGACTTTTAATACTGTAGTATACTATTATTGATATATTGTGGTGTTTTCATATTGAAAAATTAATCTGATTCTTGATCCTCTTTTGCAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAGCTAATGTATGATATGATCAAACAACTCAACAACTTATGATTTCTCATCCGCATGACTAGCAACAAAATCTCATATACTTTCAATATCAACTATTGGAAGAGTTGAGGGAACCACAAAACCAACTAGAAGATGAAACTTCAAGGATATCTCGCCTGGTGGTTATTGTTAATAATGATCATTGCTTAGCAGATAAAAGCGCAATCAACCGTTCAAATGTAGATTCGATCTTCCATTGATGAACTCGAAAAGGTAAAGAATTTACCTTGTGAGTTTGATACATTATAGCAATCTTAGTTTAAAATAGTATAGTATTTATCACTATTCTCCCCCTCCACAACAATATCAATTTAATATTCTTAGCGATTGTTGTTTTCTTTTGTGCCTTTTGGTATTTGGAGAGAGTGTAGTGTAAATGTGAAGCCTCCAGATATGCATTTTTGAAATGGATGGATTGGATAAACCCATGGGAGAAAATTAAATGTTACCATTTCATTATTTTTAAAGCTCGGA

mRNA sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Coding sequence (CDS)

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA*
Homology
[Close]
BLAST of Csa7G025190 vs. Swiss-Prot
Match: Y5382_ARATH (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.8e-41
Identity = 90/199 (45.23%), Postives = 136/199 (68.34%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]
BLAST of Csa7G025190 vs. TrEMBL
Match: A0A0A0K4X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.4e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]
BLAST of Csa7G025190 vs. TrEMBL
Match: A0A059BPU4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-60
Identity = 122/199 (61.31%), Postives = 156/199 (78.39%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA V+K+QQ+F+K ++EMDRW ELQ+RL+SQF+NASSI+ RLQ+++D KN+G L  +DG
Sbjct: 1   MEAAVRKFQQKFKKVREEMDRWGELQLRLVSQFRNASSIMDRLQVIRDGKNYGPLKAVDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I EA+  KQ+ESL+    S++KTMEE   +V S+EKI+RDGKQLVKGGS QPS+K LQQ+
Sbjct: 61  IGEAVWTKQVESLENIMLSMRKTMEEFHGVVMSLEKIHRDGKQLVKGGSGQPSVKYLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VG+KP L+DCL+GLM+L  MHRSEY LK S+VSAL  L   A    A DL +L QLLVDQ
Sbjct: 121 VGVKPCLQDCLDGLMILYEMHRSEYFLKSSVVSALSTL---ALKPSASDLHALQQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI KEEV+F++D I   E
Sbjct: 181 PNIPKEEVQFIYDIIFAEE 196

[Close]
BLAST of Csa7G025190 vs. TrEMBL
Match: D7UDC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 124/199 (62.31%), Postives = 154/199 (77.39%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME MVKKYQQ+FRK +DE  RWDELQ RL+SQF+NASSII RLQ +Q+ KN+G+L  +DG
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A+L KQMESL+    S+KKT++E   IV S+EKI RDG+QLVKGGS + ++KQLQQ+
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KPSL DCL+GL LL  MH+SEY LK S+VSAL  L  K     A DL +LHQLLVDQ
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKP---SASDLGALHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI KEEV+F+FD +   E
Sbjct: 181 PNIPKEEVQFIFDIVFAEE 196

[Close]
BLAST of Csa7G025190 vs. TrEMBL
Match: A0A0K9QTK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.1e-58
Identity = 117/195 (60.00%), Postives = 154/195 (78.97%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME ++KKYQQ+FRK ++EMDRW++LQ RL+SQF NASSIIGRLQ++ D KN+GSL G++G
Sbjct: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           + +A+L KQMESL+    SIKKT+E+  +IV S+EK+ RD KQLV+GGS+Q S KQLQQ+
Sbjct: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSL DCL+GL +L  MH SEY LK S+VSAL  +   A    ++DL +L QLL DQ
Sbjct: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNI---ALKPSSKDLGALRQLLFDQ 180

Query: 181 PNIKKEEVEFVFDTI 196
           PNI ++EV+F++D I
Sbjct: 181 PNIPRDEVQFIYDII 192

[Close]
BLAST of Csa7G025190 vs. TrEMBL
Match: A0A0J8CWF0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.1e-58
Identity = 117/195 (60.00%), Postives = 154/195 (78.97%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME ++KKYQQ+F+K ++EMD W+ LQ RLISQF NASSII RLQ++ D KN+G+L G+DG
Sbjct: 1   MEGILKKYQQKFKKVREEMDNWENLQSRLISQFSNASSIIQRLQVIGDKKNYGNLKGVDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A+L KQMESL+ +  S+K TMEE   IV S+EK+ RD KQL+ GGS QPS KQLQQ+
Sbjct: 61  IEDAVLQKQMESLENNLLSMKNTMEEFHKIVLSLEKMVRDSKQLLGGGSRQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KPSL DCL+GL++L  MH+SEY LK S+VSAL ++ +KA    + DL +L QLLVDQ
Sbjct: 121 MGIKPSLSDCLDGLVILQEMHKSEYLLKTSVVSALLKIAFKA---SSNDLGALRQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTI 196
           PNI ++EV+F+FD I
Sbjct: 181 PNIPRDEVQFIFDII 192

[Close]
BLAST of Csa7G025190 vs. TAIR10
Match: AT5G43822.1 (AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 2.1e-42
Identity = 90/199 (45.23%), Postives = 136/199 (68.34%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]
BLAST of Csa7G025190 vs. NCBI nr
Match: gi|449454299|ref|XP_004144893.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]
BLAST of Csa7G025190 vs. NCBI nr
Match: gi|659094000|ref|XP_008447827.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]
BLAST of Csa7G025190 vs. NCBI nr
Match: gi|778723284|ref|XP_011658635.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 2.7e-103
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ   DPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ---DPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 197

[Close]
BLAST of Csa7G025190 vs. NCBI nr
Match: gi|659094002|ref|XP_008447828.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 2.8e-100
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ   DPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ---DPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 197

[Close]
BLAST of Csa7G025190 vs. NCBI nr
Match: gi|659094004|ref|XP_008447830.1| (PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 9.9e-82
Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 1 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA 163
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKA
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKA 162

The following BLAST results are available for this feature:
BLAST of Csa7G025190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5382_ARATH3.8e-4145.23Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1[more]
BLAST of Csa7G025190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4X9_CUCSA1.4e-106100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1[more]
A0A059BPU4_EUCGR1.5e-6061.31Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1[more]
D7UDC1_VITVI2.2e-5962.31Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=... [more]
A0A0K9QTK1_SPIOL4.1e-5860.00Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1[more]
A0A0J8CWF0_BETVU4.1e-5860.00Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 S... [more]
BLAST of Csa7G025190 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43822.12.1e-4245.23 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Csa7G025190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454299|ref|XP_004144893.1|2.0e-106100.00PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus][more]
gi|659094000|ref|XP_008447827.1|2.1e-10396.50PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo][more]
gi|778723284|ref|XP_011658635.1|2.7e-10398.50PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus][more]
gi|659094002|ref|XP_008447828.1|2.8e-10095.00PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo][more]
gi|659094004|ref|XP_008447830.1|9.9e-8296.30PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G025190.1Csa7G025190.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 5..25
scor
NoneNo IPR availablePANTHERPTHR37904FAMILY NOT NAMEDcoord: 2..199
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G025190Cla015740Watermelon (97103) v1cuwmB604
Csa7G025190MELO3C013247Melon (DHL92) v3.5.1cumeB531
Csa7G025190ClCG02G003390Watermelon (Charleston Gray)cuwcgB546
Csa7G025190Lsi11G012910Bottle gourd (USVL1VR-Ls)culsiB494
Csa7G025190MELO3C013247.2Melon (DHL92) v3.6.1cumedB510
Csa7G025190Cla97C02G029940Watermelon (97103) v2cuwmbB529
Csa7G025190Bhi05G001353Wax gourdcuwgoB670
Csa7G025190CSPI07G01820Wild cucumber (PI 183967)cpicuB354
Csa7G025190Cucsa.099740Cucumber (Gy14) v1cgycuB111
Csa7G025190CmaCh11G013300Cucurbita maxima (Rimu)cmacuB151
Csa7G025190CmoCh11G017900Cucurbita moschata (Rifu)cmocuB132
Csa7G025190Cp4.1LG04g04510Cucurbita pepo (Zucchini)cpecuB690
Csa7G025190CsGy7G001780Cucumber (Gy14) v2cgybcuB324
Csa7G025190Carg18114Silver-seed gourdcarcuB1081
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G025190Cucurbita moschata (Rifu)cmocuB518
Csa7G025190Melon (DHL92) v3.5.1cumeB517
Csa7G025190Watermelon (Charleston Gray)cuwcgB533
Csa7G025190Cucurbita pepo (Zucchini)cpecuB257
Csa7G025190Bottle gourd (USVL1VR-Ls)culsiB488
Csa7G025190Melon (DHL92) v3.6.1cumedB496
Csa7G025190Melon (DHL92) v3.6.1cumedB516
Csa7G025190Silver-seed gourdcarcuB0228
Csa7G025190Silver-seed gourdcarcuB0872
Csa7G025190Cucumber (Chinese Long) v2cucuB151
Csa7G025190Cucumber (Chinese Long) v2cucuB171
Csa7G025190Cucumber (Gy14) v1cgycuB156
Csa7G025190Cucurbita maxima (Rimu)cmacuB527