ClCG02G003390 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G003390
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPentatricopeptide repeat (PPR) superfamily protein LENGTH=195
LocationCG_Chr02 : 3321759 .. 3327373 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGCGGCGGTGATTGAGTTACGTTTCAACCACTTGGACGGCGGCTAAAACTCAGCGCCTGCTTCATACCCAAACTTCAACCATTGTAAGGAACTTAGACCTTATTTTGACCTAGGATAAATTTTCTTAACATTTGGCTTTTTTTTTTAATTGATTTTTGTTGTTTTCTTAAGAGTATTATTTTCTATTTTTGTTGTTTGTTTAGGTTTAGGAGTTTTCTAATTTGTAAATTTTTGCTTTCAAAATAGAAGAGTTGGGTTTCTTTTGCTTTGCTTCTTGCGAATGCTGTTGTTGGTTGGTTTTATTTTGCAAAAACAAGAGTTGATATGCTCCACATTTACATTTAGGTGTTGTTTTGTTTTTGTATCTCCTAAGACTCTCGCACATATCTTCCAACACAAAAACTAGCCAACGGCCCCTTCTAACTCACTACCACACTTTTATATACATGTTTTAAGTGATTTAGGATGAATATAGAAGATGTTAGGAAGGTTTTAGAGTGTCTTTTTAGGTACTGTTTTTTATCTCGCAGTTATCTTTCAACTTCTGAACTTCAAATCCCAAATCCGAAATCACTTTTATACCTATTTTAGGTGATTTAAAGTGGGTAGGACATATTTTAGATACTTTGTTTTCATCTTGCAACTATCTTGCAACTATCTCGCAACCATCTCGCAACTTCTACCCATGTTTGTGAGATGTCTGAGAGATATAACACAGTGTAAGACCACCCTAAAGAGATAAAAAGTTGATCATCTCCCAAGAAAAAGATGATCTTTCCACTCTGTCGATAAGCCCTTCTACCATGACATGATCTTTTTCTTTCTCGTTGACTTTCCACTCTCTTTTCTCGTGTGCAACCAATTTTCAAGTTCACGCCGGCCGGTGACCATAGCAGCTCCGACCAGCGACGACTAACACCGGCCTGTGGAGCCTAACCCACAGCAGCACAAGCTCCTTCCTGCAGTGGGGGCACTCTATCCAACCACAACGTTGGAATCTACCTACAGCGGCACGATTCCTATCTATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTCCTCTATCATCGGGAGGCTTGAGGTCAGTCTCAGTTCTGATTTTAATTACACGTATTTGTATTTATTTTTTAGTTTAAAGATAAGAATCTTTGAAAATTTATTGCCAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCGTCTATTAAAAAAACAATGTAAGTTTGTTTTTCTTTCAGTTTCTTTTCTTGCCCTTACATGTGATTTGTAGGAATGCTAGAAGAAAAATTCTTAAACAAAAATTCGTAAACAAAAATAAAAGGCAATCGTGAACTTGAGCACGGTCGACTGGTTATGTCATATATCCTTTATGACCAAGAAGTTATAAGTTTGAATTTCCTCCAACACATGTTGTTAAACTAAAAGAAAAGACGATCATAAAGTTAATCCAAATCTAAGAAGCACATACACTTTAGCTTGACTGGTGTGTTTCGAACAATTGGACGCCCTGACATTTGTTGGACACGTATCTAACACTTGTTAATGCAACATATTTGTTAGATACAAGTAGTACAAAGTCAAAGTAGGTTCAACATATGTTAGACATGCATCAAACACTTGTTTAGTATACTAAATTGACACATATATAATAAAAGACAATAAAATTTGAGAGCAAAATACATCAAACTAATCTTTTAAGCATATAAATGCATAAACTCATTGATTTTGAATTTCTTTCTTGTATGAAAATGATATATATTCCAAAATATAAACTTCAATAAAATTTTCCTTGCCGTGCCCATGTCCTTGATTTTAAGAAATGGTGTGACCGTGTCTGTGTCATGTCGTATCCTTGTCCGTGCTTCTTAAGTCCAAATGGTCCGTTAAAGTATTCATGCTCTCTTGTTTTCATGAATGAAGAATCTGAATAAAGATCTCAGGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTAAGAATTTTTCTCCTCTTTTTATGTCAAGAAAGCAAACGTGCATATGCAGTGCAAATTAAAAACTGATCATGTTTGGTCCGGATTGGAGTTTGTTTTTTCAATTAGTTTTGGGACTTCTTTTTGTCGGATTAGTTTTTTACGCCCTCGTATATTCTTTCATTTGAAAATTCGACTCTTGATCATGGTAGGAGGAAACCAACTAACCTATGAAAGTCAGATTTATATCAACTATGTTGGCTTCTTTATTAGTTGTTCCATTTTCAAGAAAATACATGTATATCTTTATTGAATTCTCAATTATATATTCTGCTTGAAGCATTTGCTTATGTTACAATACGCCTATATTTATGTTTTTGGCTTCTTAATAAACTTGTTTCAATTTCTTTAGGTACAATCTTAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGTAATTTTCCTCTCAGTTGAGGAATTTGATGGGATGTTCTGGTTGTAATTAGTGGATTAACGAAGTTGGTAGTGTAAGGGAAAAAAGCACTTGGTTTTGGAGCTTCAATTTTCTTCTGATAGTTGCATATGAAACATCCTTTTCTAGTAATTTTCTTCTGATAGTTGCATATGAAACTCAAGAACACACCGAACAAAACAAGAAAGCTAAAAGATAGAATTTCAATCAAGTTCTCGAATTCATTCCCCTTGCCTTTTGAGCTGAGCTGAGGAAAATGTGAAGAATTTCCATTTTATGAGCTTGTAAAGCTTTAAGAGAGAATAGGGAGTAAGTAAGGGGAAAAAGAGGCTATAAGTAGGCCGTTTGCTATTGCTAGTTGGGCTGCTTGCCTTTATACGGCTTGGCTTCGCTATCGCTCATGACTTGTATTGTGGTCGGCCTAAAAAGTCGTATTCCTACCATAAAATAATGCTGATTATCTAGAATTATATTGTAATATAGAAATTACAATATACCAAAGAACAAAACAAGAAAGCTAAAAGATGGAATTATATTGTAATATCAATAAAGAAATTACAATATACCTCAACACATTTTAGAGGGCCGAGCATCCTCTCCCAAATTGTGATCTCACTTGAACTTTCATATTCAACTCCCGTTTCCTGTTTTTCTGGTATTTTCTTCGTTGATTCTTCTTTCTCTTCTTTGATATCAGCTAATCCTCTCTCCTCTCTTTCTCTATCTCTCTACAAAGATTTAATGAGCTTTTGTTGCAATGCTCTCACATTTCTTTGTATCTCCAACAATACTTCCATCCTCGGATCAAGATCCATTACTAAAAATGAATTTACAAGATGAACAGCTTTGATACCAATTTGTCACCTAACAAGAAAATACTCAAGAACACATTAATAAACTCTAGGACAATCAAATATGGAAATATATTGAAATATGCTATAATATCATAGAAAATAACAAGATAACCCCTAGCCTTTAAAGAGGGCTAGGCTCTCCCTAAATTCCCCAGTTAGAAAATCCACAAAATTCTTCTCCCCTTCCTAACACTCTCACTCCTTCTATTTATAGCAATATTTAGTAACTAGCTTCCTATCTAATAACCCTTACACCCCTTACTACTAATCATACTAATTATCCCAATATATATCTAACTAGGGGCCTAACATGATGGCCTTCAACTATCATCTTCTTTTCCCACTCCAAATTATGTTATTACTATGGCCTATTTCTTCCCCTCTGAAAATATTTGTATCTTGAATTGTTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTCGGAAAGAGGAAGGTTAGTAGATCTTACTTTCAGCACATTGTGTATTGAACTTTATTGATGAATGTGTATTGTTTAACTCGTAAGTTGAAAAGTATCAAATTAGCGAGTTAAATGAACCTTGTAATATGTATATTAGAAAGTAAGATGGGTTATGGTAATTGTTATCTCTTGAAAATGTTTTATTTTTTTTTATTTTTTTATTTTTGGGAGAAGAAAGGGAAACGATTATCTCCTAAAAAATGTTGAAATGTTCAACCTTCAATGTTAATGATTCCATTCTTCTGGGTGCAATGTTTGCTTCTATTTTCACGCTTTCTTTGTGTACATTTCTCGGCCTTTTGGCTAAGATCATGTGTTGTATATTTTCTTATCCTAGTGGCTTTCATTGTCATGGACCTTTTGTTTGGCTTTTCTCCAATTTTTAATGAAGCACTATCTTGAAGTAGTTGTGTGGTCCGGACTTTCAAGTGTTCGTTTACCACTACAGAGGTATTTTTTTAATTATTTTTCCCCTACCATTTTACAATTACGGTTGAGTGGTTTAAATATGACTACCTCTCAGTGGACTTTCTTCTTTCTTTTATAAAAGATGAAGATTATTATCTCTCTCGTTAGAGAAGTTCTTTTTGCCGAAGCTATTTATAAGCCCTCAAATAGGCAACTCCGAAAGAGGGAATTGATTTTTGAGTATGGAAAATCTCTGAATTTAAATCACTTCACATATATACTTAATATTGGGCATTATAGAAATCAGCTGCCAGTCTTGCTTCTCCGTTATATCTGTCTGTGATGGCCTTTGGCCCTTTACCAGATTTGACGTCTCCTCTCAATTTATACTGACTGTTTAATACTTCAATTTAGTTGTTCTGAAATTTCCCTCAATTCATGACTAAATATATTAAGCAAATTCTGTTGGTTTGACCATCTAGTGGTCATCTATTTTCAGAGGGATGGTTAAACTTTAAATCCAGCCATTAGCCTTATTTTTTTTGGATCAAAGGCATATTTGAGGGTGATTTTGATATTATTAAAATTCTTTTTGTCATGTTCAAAATCACTTGTAAACATGTCTTTAATAAGAAACTTTGATGTTTAGCTTTACATTTTCATACAAGATTTTATTACTATTGAAATTGGTTTTGAATGATTCAAAGCGTGTATAAGGTGATTTAATATGTCATGGTATTTTCATATTGAAAAATGAGTGATTCTTGATCTTCTTTTGCAGTTGAATTCATCTTTGATACTATACTGGTCCCAGAAGCCTAGCTAATATGAGATAATCAAACAATTCAAGAACATTTGATTTCATCCACAAGCTTTTTCCCCACGATTAGCAGGAAAATGGAAGAGTTGATCAAACCAAGAAACCATCGAGAAGATAAAGCTTCAAGGATATTGTATTACGAGCGTAGTTGAGTAGATAAGGCACAATTAATGACTCAAATGTTGATGATTTGATCTTTCATGTTTCTATTGTTGAATTAAAAAAGAATTTGTTCAGTGAATTTGTATACATCAAACAATCTTAGTTTGCAAGTGAAAAATAGGATCGGC

mRNA sequence

CGGCGGCGGTGATTGAGTTACGTTTCAACCACTTGGACGGCGGCTAAAACTCAGCGCCTGCTTCATACCCAAACTTCAACCATTTTCACGCCGGCCGGTGACCATAGCAGCTCCGACCAGCGACGACTAACACCGGCCTGTGGAGCCTAACCCACAGCAGCACAAGCTCCTTCCTGCAGTGGGGGCACTCTATCCAACCACAACGTTGGAATCTACCTACAGCGGCACGATTCCTATCTATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTCCTCTATCATCGGGAGGCTTGAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCGTCTATTAAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTCGGAAAGAGGAAGTTGAATTCATCTTTGATACTATACTGGTCCCAGAAGCCTAGCTAATATGAGATAATCAAACAATTCAAGAACATTTGATTTCATCCACAAGCTTTTTCCCCACGATTAGCAGGAAAATGGAAGAGTTGATCAAACCAAGAAACCATCGAGAAGATAAAGCTTCAAGGATATTGTATTACGAGCGTAGTTGAGTAGATAAGGCACAATTAATGACTCAAATGTTGATGATTTGATCTTTCATGTTTCTATTGTTGAATTAAAAAAGAATTTGTTCAGTGAATTTGTATACATCAAACAATCTTAGTTTGCAAGTGAAAAATAGGATCGGC

Coding sequence (CDS)

ATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTCCTCTATCATCGGGAGGCTTGAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCGTCTATTAAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTCGGAAAGAGGAAGTTGAATTCATCTTTGATACTATACTGGTCCCAGAAGCCTAG

Protein sequence

MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEVEFIFDTILVPEA
Homology
[Close]
BLAST of ClCG02G003390 vs. Swiss-Prot
Match: Y5382_ARATH (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.3e-43
Identity = 93/199 (46.73%), Postives = 139/199 (69.85%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEA+++K+Q++FRK K+EM++W+ LQVR +S F+NASSII RL+ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           +G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K   P   DL++LQ L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILK---PSPGDLNALQYLVVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI K+EV+ IFD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]
BLAST of ClCG02G003390 vs. TrEMBL
Match: A0A0A0K4X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 185/200 (92.50%), Postives = 194/200 (97.00%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]
BLAST of ClCG02G003390 vs. TrEMBL
Match: A0A059BPU4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-61
Identity = 123/199 (61.81%), Postives = 158/199 (79.40%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEA V+K+Q++F+K ++EMDRW +LQ+RL+SQF+NASSI+ RL++++D KN+G L  +DG
Sbjct: 1   MEAAVRKFQQKFKKVREEMDRWGELQLRLVSQFRNASSIMDRLQVIRDGKNYGPLKAVDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I +A+  KQ+ESL+    S++KTMEE   VV S+EKI+RDGKQLVKGGS QPS+K LQQR
Sbjct: 61  IGEAVWTKQVESLENIMLSMRKTMEEFHGVVMSLEKIHRDGKQLVKGGSGQPSVKYLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VG+KP L+DCL+GLM+L  MHRSEY LK S+VSAL  L   A  P A DL +LQQLLVDQ
Sbjct: 121 VGVKPCLQDCLDGLMILYEMHRSEYFLKSSVVSALSTL---ALKPSASDLHALQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI KEEV+FI+D I   E
Sbjct: 181 PNIPKEEVQFIYDIIFAEE 196

[Close]
BLAST of ClCG02G003390 vs. TrEMBL
Match: A0A0K9QTK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-60
Identity = 119/199 (59.80%), Postives = 157/199 (78.89%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           ME ++KKYQ++FRK ++EMDRW+DLQ RL+SQF NASSIIGRL+++ D KN+GSL G++G
Sbjct: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           + DA+L KQMESL+    SIKKT+E+  ++V S+EK+ RD KQLV+GGS+Q S KQLQQR
Sbjct: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSL DCL+GL +L  MH SEY LK S+VSAL  +   A  P ++DL +L+QLL DQ
Sbjct: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNI---ALKPSSKDLGALRQLLFDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI ++EV+FI+D I   +
Sbjct: 181 PNIPRDEVQFIYDIIFAED 196

[Close]
BLAST of ClCG02G003390 vs. TrEMBL
Match: D7UDC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 123/199 (61.81%), Postives = 154/199 (77.39%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           ME MVKKYQ++FRK +DE  RWD+LQ RL+SQF+NASSII RL+ +Q+ KN+G+L  +DG
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA+L KQMESL+    S+KKT++E   +V S+EKI RDG+QLVKGGS + ++KQLQQR
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           +G+KPSL DCL+GL LL  MH+SEY LK S+VSAL  L  K   P A DL +L QLLVDQ
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLK---PSASDLGALHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI KEEV+FIFD +   E
Sbjct: 181 PNIPKEEVQFIFDIVFAEE 196

[Close]
BLAST of ClCG02G003390 vs. TrEMBL
Match: A0A067GZY6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028912mg PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 122/199 (61.31%), Postives = 156/199 (78.39%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           ME +VKKYQ++F+K K+EM+RWD+LQ RLISQF+NASSII RL++LQD K++G+L+ + G
Sbjct: 1   MEGIVKKYQQKFKKIKEEMNRWDELQSRLISQFKNASSIIERLQILQDAKHYGNLNSIGG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I  A+L KQMESLQ    S++KT+EE   +V S+EK +RDGKQLV+GGSNQ ++KQLQQR
Sbjct: 61  IEAAVLRKQMESLQTILLSMQKTLEEFRGIVLSLEKFHRDGKQLVRGGSNQLTVKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKP+L DCL+GLM+L +MH SEY LK S+VS L  L   A  P   DL +LQQLLVDQ
Sbjct: 121 VGLKPTLADCLDGLMILWDMHNSEYVLKISLVSTLSTL---AVKPCTFDLGALQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI KEEV++I + I   E
Sbjct: 181 PNIPKEEVQYISEIIFAEE 196

[Close]
BLAST of ClCG02G003390 vs. TAIR10
Match: AT5G43822.1 (AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-44
Identity = 93/199 (46.73%), Postives = 139/199 (69.85%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEA+++K+Q++FRK K+EM++W+ LQVR +S F+NASSII RL+ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           +G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K   P   DL++LQ L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILK---PSPGDLNALQYLVVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI K+EV+ IFD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]
BLAST of ClCG02G003390 vs. NCBI nr
Match: gi|659094000|ref|XP_008447827.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 8.9e-99
Identity = 186/200 (93.00%), Postives = 195/200 (97.50%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEV+F+FDTILV EA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]
BLAST of ClCG02G003390 vs. NCBI nr
Match: gi|449454299|ref|XP_004144893.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 185/200 (92.50%), Postives = 194/200 (97.00%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]
BLAST of ClCG02G003390 vs. NCBI nr
Match: gi|659094002|ref|XP_008447828.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo])

HSP 1 Score: 359.0 bits (920), Expect = 5.4e-96
Identity = 184/200 (92.00%), Postives = 192/200 (96.00%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL   QDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRL---QDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEV+F+FDTILV EA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 197

[Close]
BLAST of ClCG02G003390 vs. NCBI nr
Match: gi|778723284|ref|XP_011658635.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.6e-95
Identity = 183/200 (91.50%), Postives = 191/200 (95.50%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL   QDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRL---QDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 197

[Close]
BLAST of ClCG02G003390 vs. NCBI nr
Match: gi|659094004|ref|XP_008447830.1| (PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo])

HSP 1 Score: 311.2 bits (796), Expect = 1.3e-81
Identity = 156/166 (93.98%), Postives = 163/166 (98.19%), Query Frame = 1 

Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPR 167
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKA + R
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKASSIR 166

The following BLAST results are available for this feature:
BLAST of ClCG02G003390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5382_ARATH5.3e-4346.73Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1[more]
BLAST of ClCG02G003390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4X9_CUCSA1.8e-9892.50Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1[more]
A0A059BPU4_EUCGR3.0e-6161.81Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1[more]
A0A0K9QTK1_SPIOL9.7e-6059.80Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1[more]
D7UDC1_VITVI3.7e-5961.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=... [more]
A0A067GZY6_CITSI1.4e-5861.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028912mg PE=4 SV=1[more]
BLAST of ClCG02G003390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43822.13.0e-4446.73 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of ClCG02G003390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094000|ref|XP_008447827.1|8.9e-9993.00PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo][more]
gi|449454299|ref|XP_004144893.1|2.6e-9892.50PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus][more]
gi|659094002|ref|XP_008447828.1|5.4e-9692.00PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo][more]
gi|778723284|ref|XP_011658635.1|1.6e-9591.50PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus][more]
gi|659094004|ref|XP_008447830.1|1.3e-8193.98PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G003390.1ClCG02G003390.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 5..25
scor
NoneNo IPR availablePANTHERPTHR37904FAMILY NOT NAMEDcoord: 2..199
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G003390Csa7G025190Cucumber (Chinese Long) v2cuwcgB546
ClCG02G003390MELO3C013247Melon (DHL92) v3.5.1mewcgB196
ClCG02G003390Cla015740Watermelon (97103) v1wcgwmB198
ClCG02G003390Cla97C02G029940Watermelon (97103) v2wcgwmbB138
ClCG02G003390Bhi05G001353Wax gourdwcgwgoB266
ClCG02G003390CSPI07G01820Wild cucumber (PI 183967)cpiwcgB575
ClCG02G003390Cucsa.099740Cucumber (Gy14) v1cgywcgB130
ClCG02G003390CmaCh11G013300Cucurbita maxima (Rimu)cmawcgB097
ClCG02G003390CmoCh11G017900Cucurbita moschata (Rifu)cmowcgB094
ClCG02G003390Lsi11G012910Bottle gourd (USVL1VR-Ls)lsiwcgB097
ClCG02G003390Cp4.1LG04g04510Cucurbita pepo (Zucchini)cpewcgB597
ClCG02G003390CsGy7G001780Cucumber (Gy14) v2cgybwcgB506
ClCG02G003390MELO3C013247.2Melon (DHL92) v3.6.1medwcgB191
ClCG02G003390Carg18114Silver-seed gourdcarwcgB1037
ClCG02G003390CsaV3_7G001930Cucumber (Chinese Long) v3cucwcgB571
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G003390Melon (DHL92) v3.5.1mewcgB092
ClCG02G003390Cucurbita pepo (Zucchini)cpewcgB233
ClCG02G003390Cucurbita pepo (Zucchini)cpewcgB267
ClCG02G003390Cucurbita pepo (Zucchini)cpewcgB652
ClCG02G003390Bottle gourd (USVL1VR-Ls)lsiwcgB058
ClCG02G003390Cucumber (Gy14) v2cgybwcgB409
ClCG02G003390Melon (DHL92) v3.6.1medwcgB094
ClCG02G003390Melon (DHL92) v3.6.1medwcgB193
ClCG02G003390Silver-seed gourdcarwcgB0194
ClCG02G003390Silver-seed gourdcarwcgB0336
ClCG02G003390Silver-seed gourdcarwcgB0350
ClCG02G003390Silver-seed gourdcarwcgB0828
ClCG02G003390Cucumber (Chinese Long) v3cucwcgB464
ClCG02G003390Cucumber (Gy14) v1cgywcgB185
ClCG02G003390Cucurbita maxima (Rimu)cmawcgB460
ClCG02G003390Cucurbita maxima (Rimu)cmawcgB483
ClCG02G003390Cucurbita maxima (Rimu)cmawcgB547
ClCG02G003390Cucurbita moschata (Rifu)cmowcgB459
ClCG02G003390Cucurbita moschata (Rifu)cmowcgB483
ClCG02G003390Cucurbita moschata (Rifu)cmowcgB544
ClCG02G003390Wild cucumber (PI 183967)cpiwcgB465
ClCG02G003390Cucumber (Chinese Long) v2cuwcgB443