CsaV3_7G001930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G001930
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
Locationchr7 : 1576449 .. 1581062 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCACATCATCTTTTATTTCTATCACTTCCACTATTCTCTTGTGCAAAGCGGCAGCCACCAGTTTTCTCAAAATAACACCGGCGACCGTAACGAACTCCGGCCAGCGACCACTAACGGCGCCTTTGAAGCCCCACTAACAGCGACGCAAGCTCCTTCCTGCAGCGGCGGTGCTCTATCCACGAACCACGACACTCAAATCTAACTACAGCGGCGCGATTCCTCTACTTTCTTCTCTGTATCGGTGGTGTTGTGACAGTCTAGATTTCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGGTCAGTCTCAGTTTTGATTTTTTGTTGAACTTATTTGTATTTTTTATTAGCTTGAAGATTATAATCTTTTATGACCTTTGAAATTTTGTTTCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGTATGTTTGTTTTTCTTGCCTTCACGTGTGATTTGTAGGATATGGTAGAAGAAAAAATCTTAAACAAAAATTAAAGGGGATCATGAACTTGAGCACCAACTGTCAACTAATTAAGTCATGCCTCTTTATCAGTAAGAGATTCGAAGTTTGAATTTCCACTCGAACATGTTTGAATAAAAGAATTGGAGAGCATGAAGTTGGTTGAGCATACACTTTAGTTTGGCTGGTGTGTTTATGTGAGACACATGTCAAACACTTGGAACTCCAACACTTGTTGGATTCATATAGAGCACTTTTTTGTTTGTTATATTTTTAGATACTAGTTGTACAAAGTCAATCTAGGTTCAAAATTGTTTAGTTATACTAAATAGACACATCTATAATAAAAAAATAATAAAATTTCAAAGCAAAATGCATCAAACATATTGACTCTTAATGTCTTTCTCGTGTAAAAATGATATATTTACTCAAACGTGTAAATTACAATGAAACTTAGCCCTATGTGCCCATGTCCTAGATTTAAAAAAAATGGTGTGATCGTGTCTGTTGTGTCGTATCTATGTCTGTGCTTCTTAAATCCAAAAGGTCTGTTAAAATATTCGTGCTACCTTGTTTTCATGAATGAAGAATCTAAATAAAGATCTCAGGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTAAGAACTGTCCTCATCCCTTTCTATGTCATGAAAGAAAAACTGTGTATCCAGTGAAAACTAAGAACTGATCATGTTAGAATTGAATTGGAGTAGGCTTCTTAGTCTGAAGTCTCATTTTTGTTGGGTTAGTTTTTTGCACCCTTGTATATTTTTCATTTGAAAATTCTTTTCCCGATCATTCTAGAGGAAACCAACTAACCTATGAAAGTCAGTTTTATGTCGCCAACAGTTGGCTTCTTTATCCATTGTTTCATTTTTGAGCAAATATGCGATATCTGTTTGAATTCTCATGTATGTATTCAGCTTGATGTTTTAGCTTATGTTACGATACACCTATATTTATGTTTCATTCCCCTCAATGTCTTTAGGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGTAATTTTTCTCCCAGTTGATGAATTTGATGGGATGTTCTAGTTGCAACTAGAGGATTAATGAAGTTGGTAATGTAAAGTAAAAAAGAACATGTTATATATATATAAATTTTTACACCAAAATGGAGCATTGAAAATGGATGAATCATGCACTTCATTTGTAGATTTTATTTGAAAATTCTAGGCTTCTAGCATTTGTCTCTTTCCAAACCTTCGTTATCAACGCAGAAATGATACTGAACCAAACAACTTCTTTAGTGGCTTCGAATGGGTGGTCCATTAGTGACGAAAATGAAAACAAAAACATAGAGATTGAATTTTCTTCTGATAGGTGCTTGTGAAACATCCTTTTCTAGTACTGGCCATCAACTATCATCTTCTTTTCCCCCTCCAAGTTATGTAAATCACTATGGCCCATTTTTTCTCTCAGAAAATTTGTGCATCTTGAATTGTTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGGTTAGCATTTGATACTTTCAGCACATCATATATTGAACTTTATTGATGAATATGTCACTTTTAAATTGAAAATAATCAAATTAGCGAATAAAAAGATGGGGCTTTTTCAAAAATAGAAAGAAGAAAAAAAACAAACTATTGACACTCCATAAAGAAATCACCAAAAAGACAAAATTCATTACACTTTATTTTTCTATGAAGTGTATTGTCAATTTTTCTATTTTTCACAATTTCCCTAAAAAGAACCTTGGAATGTGAAAATTTGGAAGTTAGATGGGTTTAGGTAAATGGTGTTATATGTCCTAGAAAATGTTGAATGTTCAACCTTGAATGTTAGGAAGCGTCTGGCCCACAAAGTGGAGTAAACAAGTATGAGATTAATATTTTGAAGTTAGTAAGTTTTTGTAGGTAGAGTTGTAAGATCGAGTTCTTTCATTATTGTGAAAAGTAGATTATGAAAGCAAGATGGAGTTACTTGGTAAATGTAGAAAGTAGAGATGGAGGGAAAGATTAAATTACTTGGTAAATGCAAAAAGTACAAAAAAATAAAATAAAAAATAAAGAAGATGAAGTTACTCGATAAATGTGCTAGTTCAATAATGTTTTTTATAGAAATTGAGTTGTTTAAGTTGGTGAGCCAAACGACCCCTTGGTGATTCCATTCTTCTAGATGCAATGTTTACTTCTATTTTCACGCTTTCATCATGTTCCTCTCTGGGTCTTTTGTCTAAGACCATATGTTGTATATTTTCTTATCTAATGGCTTTCATTGTCATGAACCTTACTCTTCTGACTTTGAAGTGTTCATTTACCACTAGAGGAAAATCTTCATGTTTTTCTCGTTTTCTACCGTTTTACAACTATGGTTGAGTGGTTTATACACTACTGCTTCTCAATGTACTTTCTTCTTTATTTCATAAAACATGAAGATTATTATCTCATTAGAGATATTCTTTTTGCCAAAGCTATTTGTAATCCCTCATGTAGGTAGCTTCGAAAGAGGGAAGAGTACAGGAAATCTCTAAATTTGAAATCACTGCACATATATACATATCCTTGGCTATTATAAAAGAACAACTACAAGTCTTGTCTTTCCATTTTCTATGAAAGGCTTGACCAGATTTGACGTTCCTCGTTAATTTTTACTGTCTTAAGATTTGTTTTGTACACCTTAGTTTCCCACAATAAGTATACTCAGCGTTGTCTAATAAAATATTATGTTCCTTTCAAAAAATGAAGAAAAAATAATAATAAATTTGGTTTGGCTATCTAGTGGTCATCTGTTCTTGTCAGAGGGGTGGTTGAACTTCGTTGGATTTCCACCCATTGTTTCTTTTTTCCTTCCATTATGGTCATGTTTGGTAAAAAATACTTTTATCACATTTAAAACCACTCCCAATTGTATCGTTTAATCTTTTAAATATTTAATGGTTTAGTTTTATATTCTTAAACACAATTTACTTACATGATTCAAAGTCGTATGGGAATGACTTTTAATACTGTAGTATACTATTATTGATATATTGTGGTGTTTTCATATTGAAAAATTAATCTGATTCTTGATCCTCTTTTGCAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAGCTAATGTATGATATGATCAAACAACTCAACAACTTATGATTTCTCATCCGCATGACTAGCAACAAAATCTCATATACTTTCAATATCAACTATTGGAAGAGTTGAGGGAACCACAAAACCAACTAGAAGATGAAACTTCAAGGATATCTCGCCTGGTGGTTATTGTTAATAATGATCATTGCTTAGCAGATAAAAGCGCAATCAACCGTTCAAATGTAGATTCGATCTTCCATTGATGAACTCGAAAAGGTAAAGAATTTACCTTGTGAGTTTGATACATTATAGCAATCTTAGTTTAAAATAGTATAGTATTTATCACTATTCTCCCCCTCCACAACAATATCAATTTAATATTCTTAGCGATTGTTGTTTTCTTTTGTGCCTTTTGGTATTTGGAGAGAGTGTAGTGTAAATGTGAAGCCTCCAGATATGCATTTTTGAAATGGATGGATTGGATAAACCCATGGGAGAAAATTAAATGTTACCATTTCATTATTTTTAAAGCTCGGATTTGTCATTTGCATGAAATTTTGATTTGTAAACTATATTTTCTTTTTAATAATTTGTTATTTCTGAACTTTACCTTTGGAAGCGA

mRNA sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Coding sequence (CDS)

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQKVGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQPNIKKEEVEFVFDTILVLEA
Homology
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BLAST of CsaV3_7G001930 vs. NCBI nr
Match: XP_004144893.1 (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus] >KGN43347.1 hypothetical protein Csa_7G025190 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 4.3e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]
BLAST of CsaV3_7G001930 vs. NCBI nr
Match: XP_008447827.1 (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 4.4e-102
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

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BLAST of CsaV3_7G001930 vs. NCBI nr
Match: XP_011658635.1 (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 5.8e-102
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR---LQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 197

[Close]
BLAST of CsaV3_7G001930 vs. NCBI nr
Match: XP_016900442.1 (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 2.7e-99
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSD--LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 198

[Close]
BLAST of CsaV3_7G001930 vs. NCBI nr
Match: XP_008447828.1 (PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 6.0e-99
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR---LQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 197

[Close]
BLAST of CsaV3_7G001930 vs. TAIR10
Match: AT5G43822.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 4.1e-41
Identity = 90/199 (45.23%), Postives = 138/199 (69.35%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]
BLAST of CsaV3_7G001930 vs. Swiss-Prot
Match: sp|Q6NPG7|Y5382_ARATH (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.3e-40
Identity = 90/199 (45.23%), Postives = 138/199 (69.35%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]
BLAST of CsaV3_7G001930 vs. TrEMBL
Match: tr|A0A0A0K4X9|A0A0A0K4X9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.8e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]
BLAST of CsaV3_7G001930 vs. TrEMBL
Match: tr|A0A1S3BIA7|A0A1S3BIA7_CUCME (uncharacterized protein At5g43822 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.9e-102
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]
BLAST of CsaV3_7G001930 vs. TrEMBL
Match: tr|A0A1S4DWT4|A0A1S4DWT4_CUCME (uncharacterized protein At5g43822 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.8e-99
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSD--LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 198

[Close]
BLAST of CsaV3_7G001930 vs. TrEMBL
Match: tr|A0A1S3BIY0|A0A1S3BIY0_CUCME (uncharacterized protein At5g43822 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.0e-99
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR---LQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 197

[Close]
BLAST of CsaV3_7G001930 vs. TrEMBL
Match: tr|A0A1S3BHR8|A0A1S3BHR8_CUCME (uncharacterized protein At5g43822 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.8e-80
Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 0 

Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA 163
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKA
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKA 162

The following BLAST results are available for this feature:
BLAST of CsaV3_7G001930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144893.14.3e-105100.00PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus] >KGN43... [more]
XP_008447827.14.4e-10296.50PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo][more]
XP_011658635.15.8e-10298.50PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus][more]
XP_016900442.12.7e-9995.50PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo][more]
XP_008447828.16.0e-9995.00PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo][more]
BLAST of CsaV3_7G001930 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43822.14.1e-4145.23Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsaV3_7G001930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6NPG7|Y5382_ARATH7.3e-4045.23Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 P... [more]
BLAST of CsaV3_7G001930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K4X9|A0A0A0K4X9_CUCSA2.8e-105100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1[more]
tr|A0A1S3BIA7|A0A1S3BIA7_CUCME2.9e-10296.50uncharacterized protein At5g43822 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A1S4DWT4|A0A1S4DWT4_CUCME1.8e-9995.50uncharacterized protein At5g43822 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A1S3BIY0|A0A1S3BIY0_CUCME4.0e-9995.00uncharacterized protein At5g43822 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A1S3BHR8|A0A1S3BHR8_CUCME1.8e-8096.30uncharacterized protein At5g43822 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038985At5g43822-like
IPR029159CK2S
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G001930.1CsaV3_7G001930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
IPR029159Casein Kinase 2 substratePFAMPF15011CK2Scoord: 7..156
e-value: 1.1E-41
score: 142.3
IPR038985At5g43822-likePANTHERPTHR37904FAMILY NOT NAMEDcoord: 1..196

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G001930CSPI07G01820Wild cucumber (PI 183967)cpicucB415
CsaV3_7G001930Cucsa.099740Cucumber (Gy14) v1cgycucB116
CsaV3_7G001930CmaCh11G013300Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G001930CmoCh11G017900Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G001930Cp4.1LG04g04510Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G001930CsGy7G001780Cucumber (Gy14) v2cgybcucB348
CsaV3_7G001930Carg18114Silver-seed gourdcarcucB1114
CsaV3_7G001930Cla015740Watermelon (97103) v1cucwmB634
CsaV3_7G001930MELO3C013247Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G001930ClCG02G003390Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G001930Lsi11G012910Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G001930MELO3C013247.2Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G001930Cla97C02G029940Watermelon (97103) v2cucwmbB549
CsaV3_7G001930Bhi05G001353Wax gourdcucwgoB695
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G001930Cucumber (Chinese Long) v3cuccucB187
CsaV3_7G001930Cucumber (Chinese Long) v3cuccucB214
CsaV3_7G001930Silver-seed gourdcarcucB0232
CsaV3_7G001930Silver-seed gourdcarcucB0386
CsaV3_7G001930Cucumber (Gy14) v2cgybcucB196
CsaV3_7G001930Cucumber (Gy14) v2cgybcucB306
CsaV3_7G001930Cucumber (Gy14) v1cgycucB160
CsaV3_7G001930Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G001930Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G001930Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G001930Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G001930Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G001930Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G001930Wild cucumber (PI 183967)cpicucB375
CsaV3_7G001930Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G001930Melon (DHL92) v3.5.1cucmeB534
CsaV3_7G001930Melon (DHL92) v3.6.1cucmedB521